BLASTX 7.6.2
Query= UN44528 /QuerySize=840
(839 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G30620.1 | Symbols: | histone H1.2 | chr2:130... 183 1e-046
TAIR9_protein||AT1G06760.1 | Symbols: | histone H1, putative | ... 179 2e-045
TAIR9_protein||AT2G18050.1 | Symbols: HIS1-3 | HIS1-3 (HISTONE H... 110 2e-024
TAIR9_protein||AT2G18050.2 | Symbols: HIS1-3 | HIS1-3 (HISTONE H... 83 2e-016
TAIR9_protein||AT1G14900.1 | Symbols: HMGA | HMGA (HIGH MOBILITY... 64 1e-010
TAIR9_protein||AT1G49950.3 | Symbols: TRB1, ATTRB1 | DNA-binding... 55 4e-008
TAIR9_protein||AT1G49950.2 | Symbols: TRB1, ATTRB1 | DNA-binding... 55 4e-008
TAIR9_protein||AT1G49950.1 | Symbols: TRB1, ATTRB1 | DNA-binding... 55 4e-008
>TAIR9_protein||AT2G30620.1 | Symbols: | histone H1.2 | chr2:13045360-13046267
FORWARD
Length = 274
Score = 183 bits (464), Expect = 1e-046
Identities = 112/192 (58%), Positives = 127/192 (66%), Gaps = 11/192 (5%)
Frame = +2
Query: 20 TNVEETVTAPVASEKKAKKTKEAKAPKKKPAAKAP-RKRSSSSHPTYEEMIKDAITTLKE 196
T V+ P A K+KKT AKA KK A AP +K+++SSHPTYEEMIKDAI TLKE
Sbjct: 19 TTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTSSHPTYEEMIKDAIVTLKE 78
Query: 197 RTGSSQYAIRKFIEEKQKTLPPTFRKLLLVNLKRLVASGKLVKVKGSFKLPSATKSTAVA 376
RTGSSQYAI+KFIEEK K+LPPTFRKLLLVNLKRLVAS KLVKVK SFK+PSA +S A
Sbjct: 79 RTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSA-RSAATP 137
Query: 377 APAAP-------KPKPKTKTVAAVSKTRTSPGKKKAAPPAKK--AAAAVTKKAKAKAPAK 529
PAAP KPK K AAV+ + K PA K A A VT K KAK A
Sbjct: 138 KPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKVVAKAKVTAKPKAKVTAA 197
Query: 530 SVKAKAVKFPAK 565
K+K+V +K
Sbjct: 198 KPKSKSVAAVSK 209
Score = 56 bits (134), Expect = 2e-008
Identities = 63/175 (36%), Positives = 79/175 (45%), Gaps = 24/175 (13%)
Frame = +2
Query: 89 KAPKKKPAAKAPRKRSSSSHPTYEEMIKDAITTLKERTGSSQYAIRKFIEEKQKTLPPTF 268
K K K + K P RS+++ P +K T + + G A+ K K
Sbjct: 118 KLVKVKASFKIPSARSAAT-PKPAAPVKKKATVVAKPKGKVAAAV---APAKAKAAAKGT 173
Query: 269 RKLLLVNLKRLVASGKLVKVKGSFKLPSA-TKSTAVAAPAAPKPKPKTKTVAAVSKTRTS 445
+K ++VA K V K K+ +A KS +VAA + KTK VAA K +
Sbjct: 174 KK----PAAKVVAKAK-VTAKPKAKVTAAKPKSKSVAAVS------KTKAVAAKPKAKER 222
Query: 446 PGK----KKAAPPAKKAAAAVTKKA-KAKAPAKSVKAKAVKFPAKRVSTRKVKK* 595
P K P KK AA K A KAPAKSVK VK PAKR STRK KK*
Sbjct: 223 PAKASRTSTRTSPGKKVAAPAKKVAVTKKAPAKSVK---VKSPAKRASTRKAKK* 274
Score = 53 bits (126), Expect = 2e-007
Identities = 63/178 (35%), Positives = 80/178 (44%), Gaps = 33/178 (18%)
Frame = +2
Query: 50 VASEKKAKKTKEAKAPKKKPAAKAPRKRSSSSHPTYEEMIKDAITTLKERTGSSQYAIRK 229
VASEK K KA K P+A+ S++ P +K T + + G A+
Sbjct: 114 VASEKLVK----VKASFKIPSAR------SAATPKPAAPVKKKATVVAKPKGKVAAAV-- 161
Query: 230 FIEEKQKTLPPTFRKLLLVNLKRLVASGKLV---KVKGSFKLPSATKSTAVAAPAAPKPK 400
K K +K ++VA K+ K K + P + AV+ A K
Sbjct: 162 -APAKAKAAAKGTKK----PAAKVVAKAKVTAKPKAKVTAAKPKSKSVAAVSKTKAVAAK 216
Query: 401 PKTK---TVAAVSKTRTSPGKKKAAPPAKKAAAAVTKKAKAKAPAKSVKAKAVKFPAK 565
PK K A+ + TRTSPGKK AAP K AVTK KAPAKSVK VK PAK
Sbjct: 217 PKAKERPAKASRTSTRTSPGKKVAAPAKK---VAVTK----KAPAKSVK---VKSPAK 264
>TAIR9_protein||AT1G06760.1 | Symbols: | histone H1, putative |
chr1:2076687-2077616 REVERSE
Length = 275
Score = 179 bits (453), Expect = 2e-045
Identities = 107/192 (55%), Positives = 120/192 (62%), Gaps = 3/192 (1%)
Frame = +2
Query: 8 ATVPTNVEETVTAPVASEKKAKKTKEAKAPKKKPAAKAPRKRSSSSHPTYEEMIKDAITT 187
A P P A +K K KE K +KK A AP+KR+ SSHPTYEEMIKDAI T
Sbjct: 18 ADAPVTDAAVEKKPAAKGRKTKNVKEVK--EKKTVAAAPKKRTVSSHPTYEEMIKDAIVT 75
Query: 188 LKERTGSSQYAIRKFIEEKQKTLPPTFRKLLLVNLKRLVASGKLVKVKGSFKLPSATKST 367
LKERTGSSQYAI+KFIEEK+K LPPTFRKLLL+NLKRLVASGKLVKVK SFKLPSA+
Sbjct: 76 LKERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKLPSASAKA 135
Query: 368 AVAAPAAPKPKPKTKTVAAVSKTRTSPGKKKAAPPAKKAAAAVTKKAKAKAPAKSVKAKA 547
+ AA K P K A V+ T+ + K AA AKK A K A AK KAK
Sbjct: 136 SSPKAAAEKSAPAKKKPATVAVTK-AKRKVAAASKAKKTIAVKPKTAAAKKVTAKAKAKP 194
Query: 548 VKFPAKRVSTRK 583
V + RK
Sbjct: 195 VPRATAAATKRK 206
>TAIR9_protein||AT2G18050.1 | Symbols: HIS1-3 | HIS1-3 (HISTONE H1-3); DNA
binding / nucleosomal DNA binding | chr2:7846095-7846670 FORWARD
Length = 168
Score = 110 bits (273), Expect = 2e-024
Identities = 68/165 (41%), Positives = 89/165 (53%), Gaps = 3/165 (1%)
Frame = +2
Query: 83 EAKAPKKKPAAKAPRKRSSSSHPTYEEMIKDAITTLKERTGSSQYAIRKFIEEKQKT-LP 259
E K KK PAAK PRK +++HP Y +MIK+A+ LKE+ GSS YAI K IEEK K+ LP
Sbjct: 3 EDKILKKTPAAKKPRKPKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLP 62
Query: 260 PTFRKLLLVNLKRLVASGKLVKVKGSFKLPSATKSTAVAAPAAPKPKPKTKTVAAVSKTR 439
+FRK L + LK VA GKLVK++ S+KL TK K K + +TR
Sbjct: 63 ESFRKTLSLQLKNSVAKGKLVKIRASYKLSDTTKMITRQQDKKNKKNMKQEDKEITKRTR 122
Query: 440 TSPGKKKAAPPAKKAAAAVTKKAKAKAPAKSVKAKAVKFPAKRVS 574
+S + K K +K K KS+K+ K A + S
Sbjct: 123 SSSTRPKKTVSVNKQEK--KRKVKKARQPKSIKSSVGKKKAMKAS 165
>TAIR9_protein||AT2G18050.2 | Symbols: HIS1-3 | HIS1-3 (HISTONE H1-3); DNA
binding / nucleosomal DNA binding | chr2:7846254-7846670 FORWARD
Length = 139
Score = 83 bits (203), Expect = 2e-016
Identities = 54/138 (39%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Frame = +2
Query: 164 MIKDAITTLKERTGSSQYAIRKFIEEKQKT-LPPTFRKLLLVNLKRLVASGKLVKVKGSF 340
MIK+A+ LKE+ GSS YAI K IEEK K+ LP +FRK L + LK VA GKLVK++ S+
Sbjct: 1 MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASY 60
Query: 341 KLPSATKSTAVAAPAAPKPKPKTKTVAAVSKTRTSPGKKKAAPPAKKAAAAVTKKAKAKA 520
KL TK K K + +TR+S + K K +K K
Sbjct: 61 KLSDTTKMITRQQDKKNKKNMKQEDKEITKRTRSSSTRPKKTVSVNKQEK--KRKVKKAR 118
Query: 521 PAKSVKAKAVKFPAKRVS 574
KS+K+ K A + S
Sbjct: 119 QPKSIKSSVGKKKAMKAS 136
>TAIR9_protein||AT1G14900.1 | Symbols: HMGA | HMGA (HIGH MOBILITY GROUP A); DNA
binding | chr1:5138665-5139353 REVERSE
Length = 205
Score = 64 bits (154), Expect = 1e-010
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Frame = +2
Query: 137 SSSHPTYEEMIKDAITTLKERTGSSQYAIRKFIEEKQKTLPPTFRKLLLVNLKRLVASGK 316
S S P Y +MI +AI +L ++ G ++ I K IE Q+TLPP+ LL +L ++ +G+
Sbjct: 20 SFSLPPYPQMIMEAIESLNDKNGCNKTTIAKHIESTQQTLPPSHMTLLSYHLNQMKKTGQ 79
Query: 317 LVKVKGSFKLPSATKSTAVAAPAAPKPKPKTKT------VAAVSKTRTSPGKKKAAPPAK 478
L+ VK ++ P PK K + ++ V A + T P + + PP
Sbjct: 80 LIMVKNNYMKPDPDAPPKRGRGRPPKQKTQAESDAAAAAVVAATVVSTDPPRSRGRPPKP 139
Query: 479 K 481
K
Sbjct: 140 K 140
>TAIR9_protein||AT1G49950.3 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 55 bits (132), Expect = 4e-008
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +2
Query: 158 EEMIKDAITTLKERTGSSQYAIRKFIEEKQKTLPPTFRKLLLVNLKRLVASGKLVKVKGS 337
+ +I +AI TLKE G ++ I +IE+ Q PP F++LL LK L + GKLVKVK
Sbjct: 122 DSLIMEAIATLKEPGGCNKTTIGAYIED-QYHAPPDFKRLLSTKLKYLTSCGKLVKVKRK 180
Query: 338 FKLPSAT 358
+++P++T
Sbjct: 181 YRIPNST 187
>TAIR9_protein||AT1G49950.2 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 55 bits (132), Expect = 4e-008
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +2
Query: 158 EEMIKDAITTLKERTGSSQYAIRKFIEEKQKTLPPTFRKLLLVNLKRLVASGKLVKVKGS 337
+ +I +AI TLKE G ++ I +IE+ Q PP F++LL LK L + GKLVKVK
Sbjct: 122 DSLIMEAIATLKEPGGCNKTTIGAYIED-QYHAPPDFKRLLSTKLKYLTSCGKLVKVKRK 180
Query: 338 FKLPSAT 358
+++P++T
Sbjct: 181 YRIPNST 187
>TAIR9_protein||AT1G49950.1 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 55 bits (132), Expect = 4e-008
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +2
Query: 158 EEMIKDAITTLKERTGSSQYAIRKFIEEKQKTLPPTFRKLLLVNLKRLVASGKLVKVKGS 337
+ +I +AI TLKE G ++ I +IE+ Q PP F++LL LK L + GKLVKVK
Sbjct: 122 DSLIMEAIATLKEPGGCNKTTIGAYIED-QYHAPPDFKRLLSTKLKYLTSCGKLVKVKRK 180
Query: 338 FKLPSAT 358
+++P++T
Sbjct: 181 YRIPNST 187
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,620,849,941
Number of Sequences: 33410
Number of Extensions: 21620849941
Number of Successful Extensions: 681076658
Number of sequences better than 0.0: 0
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