BLASTX 7.6.2
Query= UN44602 /QuerySize=960
(959 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster G... 116 3e-025
sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from tra... 106 4e-022
sp|P93290|M240_ARATH Uncharacterized mitochondrial protein AtMg0... 101 1e-020
sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg0... 97 1e-019
sp|P0C2J7|YH41B_YEAST Transposon Ty4-H Gag-Pol polyprotein OS=Sa... 72 4e-012
sp|P47024|YJ41B_YEAST Transposon Ty4-J Gag-Pol polyprotein OS=Sa... 72 4e-012
>sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster GN=GIP PE=1
SV=3
Length = 1409
Score = 116 bits (289), Expect = 3e-025
Identities = 65/197 (32%), Positives = 107/197 (54%), Gaps = 3/197 (1%)
Frame = -3
Query: 948 AVHKLCQFTSSPRAPHLQAAYKVLHYFKGTIGLGLFYSSQ--SDLKLSAFADADWGSCPY 775
AV+ L +++S + Q +VL Y KGTI + L + + K+ + D+DW
Sbjct: 1202 AVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEI 1261
Query: 774 TRQSVSG-LCVFIGSSLINWRSNKQDTVSSSSAESEYRAMSEAVKEMIWFRNMMEDLWIE 598
R+S +G L +LI W + +Q++V++SS E+EY A+ EAV+E +W + ++ + I+
Sbjct: 1262 DRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIK 1321
Query: 597 TREAAPLYCDNTAAIHIANNAVFQERTKHVERDCHIVKEWVKKGLVRTLHVRTGNQLADI 418
+Y DN I IANN +R KH++ H +E V+ ++ ++ T NQLADI
Sbjct: 1322 LENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADI 1381
Query: 417 LTKPQYPSSFRHLMSKM 367
TKP + F L K+
Sbjct: 1382 FTKPLPAARFVELRDKL 1398
>sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT
1-94 OS=Nicotiana tabacum PE=2 SV=1
Length = 1328
Score = 106 bits (262), Expect = 4e-022
Identities = 59/180 (32%), Positives = 97/180 (53%), Gaps = 2/180 (1%)
Frame = -3
Query: 948 AVHKLCQFTSSPRAPHLQAAYKVLHYFKGTIGLGLFYSSQSDLKLSAFADADWGSCPYTR 769
AV + +F +P H +A +L Y +GT G L + SD L + DAD R
Sbjct: 1132 AVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGG-SDPILKGYTDADMAGDIDNR 1190
Query: 768 QSVSGLCVFIGSSLINWRSNKQDTVSSSSAESEYRAMSEAVKEMIWFRNMMEDLWIETRE 589
+S +G I+W+S Q V+ S+ E+EY A +E KEMIW + +++L + +E
Sbjct: 1191 KSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKE 1250
Query: 588 AAPLYCDNTAAIHIANNAVFQERTKHVERDCHIVKEWVKKGLVRTLHVRTGNQLADILTK 409
+YCD+ +AI ++ N+++ RTKH++ H ++E V ++ L + T AD+LTK
Sbjct: 1251 YV-VYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTK 1309
>sp|P93290|M240_ARATH Uncharacterized mitochondrial protein AtMg00240
OS=Arabidopsis thaliana GN=AtMg00240 PE=4 SV=1
Length = 111
Score = 101 bits (250), Expect = 1e-020
Identities = 45/72 (62%), Positives = 57/72 (79%)
Frame = -3
Query: 954 TFAVHKLCQFTSSPRAPHLQAAYKVLHYFKGTIGLGLFYSSQSDLKLSAFADADWGSCPY 775
TFAV++L QF+S+ R +QA YKVLHY KGT+G GLFYS+ SDL+L AFAD+DW SCP
Sbjct: 11 TFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPD 70
Query: 774 TRQSVSGLCVFI 739
TR+SV+G C +
Sbjct: 71 TRRSVTGFCSLV 82
>sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810
OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1
Length = 240
Score = 97 bits (240), Expect = 1e-019
Identities = 44/108 (40%), Positives = 64/108 (59%)
Frame = -3
Query: 954 TFAVHKLCQFTSSPRAPHLQAAYKVLHYFKGTIGLGLFYSSQSDLKLSAFADADWGSCPY 775
++AV+ +CQ P +VL Y KGTI GL+ S L + AF D+DW C
Sbjct: 118 SYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTS 177
Query: 774 TRQSVSGLCVFIGSSLINWRSNKQDTVSSSSAESEYRAMSEAVKEMIW 631
TR+S +G C F+G ++I+W + +Q TVS SS E+EYRA++ E+ W
Sbjct: 178 TRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>sp|P0C2J7|YH41B_YEAST Transposon Ty4-H Gag-Pol polyprotein OS=Saccharomyces
cerevisiae GN=TY4B-H PE=3 SV=1
Length = 1802
Score = 72 bits (176), Expect = 4e-012
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 3/198 (1%)
Frame = -3
Query: 951 FAVHKLCQFTSSPRAPHLQAAYKVLHYFKGTIGLGLFY--SSQSDLKLSAFADADWGSCP 778
FAV K+ + + P YK++ Y +G+ Y D K+ A DA GS
Sbjct: 1592 FAVKKVARLVNYPHERVFYMIYKIIQYLVRYKDIGIHYDRDCNKDKKVIAITDASVGS-E 1650
Query: 777 YTRQSVSGLCVFIGSSLINWRSNKQDTVSSSSAESEYRAMSEAVKEMIWFRNMMEDLWIE 598
Y QS G+ ++ G ++ N SNK SS E+E A+ E + + +++L
Sbjct: 1651 YDAQSRIGVILWYGMNIFNVYSNKSTNRCVSSTEAELHAIYEGYADSETLKVTLKELGEG 1710
Query: 597 TREAAPLYCDNTAAIHIANNAVFQERTKHVERDCHIVKEWVKKGLVRTLHVRTGNQLADI 418
+ D+ AI N + Q + K I+KE +K+ ++ L + +AD+
Sbjct: 1711 DNNDIVMITDSKPAIQGLNRSYQQPKEKFTWIKTEIIKEKIKEKSIKLLKITGKGNIADL 1770
Query: 417 LTKPQYPSSFRHLMSKME 364
LTKP S F+ + ++
Sbjct: 1771 LTKPVSASDFKRFIQVLK 1788
>sp|P47024|YJ41B_YEAST Transposon Ty4-J Gag-Pol polyprotein OS=Saccharomyces
cerevisiae GN=TY4B-J PE=3 SV=2
Length = 1803
Score = 72 bits (176), Expect = 4e-012
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 3/198 (1%)
Frame = -3
Query: 951 FAVHKLCQFTSSPRAPHLQAAYKVLHYFKGTIGLGLFY--SSQSDLKLSAFADADWGSCP 778
FAV K+ + + P YK++ Y +G+ Y D K+ A DA GS
Sbjct: 1593 FAVKKVARLVNYPHERVFYMIYKIIQYLVRYKDIGIHYDRDCNKDKKVIAITDASVGS-E 1651
Query: 777 YTRQSVSGLCVFIGSSLINWRSNKQDTVSSSSAESEYRAMSEAVKEMIWFRNMMEDLWIE 598
Y QS G+ ++ G ++ N SNK SS E+E A+ E + + +++L
Sbjct: 1652 YDAQSRIGVILWYGMNIFNVYSNKSTNRCVSSTEAELHAIYEGYADSETLKVTLKELGEG 1711
Query: 597 TREAAPLYCDNTAAIHIANNAVFQERTKHVERDCHIVKEWVKKGLVRTLHVRTGNQLADI 418
+ D+ AI N + Q + K I+KE +K+ ++ L + +AD+
Sbjct: 1712 DNNDIVMITDSKPAIQGLNRSYQQPKEKFTWIKTEIIKEKIKEKSIKLLKITGKGNIADL 1771
Query: 417 LTKPQYPSSFRHLMSKME 364
LTKP S F+ + ++
Sbjct: 1772 LTKPVSASDFKRFIQVLK 1789
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,457,583,466
Number of Sequences: 518415
Number of Extensions: 168457583466
Number of Successful Extensions: 1041708194
Number of sequences better than 0.0: 0
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