BLASTX 7.6.2
Query= UN44618 /QuerySize=561
(560 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|301133584|gb|ADK63414.1| CCCH type zinc finger protein [Brass... 138 4e-031
gi|297833390|ref|XP_002884577.1| hypothetical protein ARALYDRAFT... 134 6e-030
gi|6437560|gb|AAF08587.1|AC011623_20 hypothetical protein [Arabi... 128 4e-028
gi|79395677|ref|NP_187292.2| zinc finger CCCH domain-containing ... 128 4e-028
gi|110740437|dbj|BAF02113.1| hypothetical protein [Arabidopsis t... 126 2e-027
gi|297807877|ref|XP_002871822.1| hypothetical protein ARALYDRAFT... 67 9e-010
gi|79516213|ref|NP_197356.2| zinc finger CCCH domain-containing ... 63 2e-008
gi|297670004|ref|XP_002813170.1| PREDICTED: hypothetical protein... 57 9e-007
gi|147818474|emb|CAN74119.1| hypothetical protein VITISV_002050 ... 57 2e-006
gi|225436765|ref|XP_002267320.1| PREDICTED: hypothetical protein... 57 2e-006
gi|255551693|ref|XP_002516892.1| nucleic acid binding protein, p... 55 4e-006
gi|122207693|sp|Q2R4J4.2|C3H63_ORYSJ RecName: Full=Zinc finger C... 55 5e-006
gi|108864369|gb|ABG22481.1| Zinc finger CCCH type domain contain... 55 5e-006
gi|115485469|ref|NP_001067878.1| Os11g0472000 [Oryza sativa Japo... 55 5e-006
>gi|301133584|gb|ADK63414.1| CCCH type zinc finger protein [Brassica rapa]
Length = 455
Score = 138 bits (347), Expect = 4e-031
Identities = 74/92 (80%), Positives = 81/92 (88%), Gaps = 1/92 (1%)
Frame = -3
Query: 486 CLSSSSSSSSLSYSPSASSLTDMPVAPYPIGSSSLSGASAPVSSSDVPTTTQAVTAAASA 307
C S +SSLSYSPSASSLTDMPVAPYPIGSS+LSGASAPVSSS+ P T +AVTA S+
Sbjct: 365 CKFDHSMASSLSYSPSASSLTDMPVAPYPIGSSTLSGASAPVSSSNEP-TVEAVTAVVSS 423
Query: 306 PMVSGLSSQEPAETSGDSASVSGSVEAKTSSS 211
PMVSGLSS+EPAET GDSASVSGS+EAKTSSS
Sbjct: 424 PMVSGLSSEEPAETGGDSASVSGSIEAKTSSS 455
Score = 72 bits (176), Expect = 3e-011
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = -2
Query: 559 EKECSYYLRTGQCKFGLTCRFNHPVPQQQQQQ 464
EKECSYY+RTGQCKFGLTCRFNHPVPQ QQQQ
Sbjct: 150 EKECSYYMRTGQCKFGLTCRFNHPVPQPQQQQ 181
>gi|297833390|ref|XP_002884577.1| hypothetical protein ARALYDRAFT_477944
[Arabidopsis lyrata subsp. lyrata]
Length = 454
Score = 134 bits (337), Expect = 6e-030
Identities = 72/91 (79%), Positives = 75/91 (82%)
Frame = -3
Query: 486 CLSSSSSSSSLSYSPSASSLTDMPVAPYPIGSSSLSGASAPVSSSDVPTTTQAVTAAASA 307
C S SSSLSYSPSASSLTDMPVAPYPIGSSSLSG+SAPVSSS+ PTT AA S
Sbjct: 364 CRFDHSMSSSLSYSPSASSLTDMPVAPYPIGSSSLSGSSAPVSSSNEPTTEAVTAAAVST 423
Query: 306 PMVSGLSSQEPAETSGDSASVSGSVEAKTSS 214
MVSGLS EPAETSGDSASVSGS+EAKTSS
Sbjct: 424 SMVSGLSRPEPAETSGDSASVSGSIEAKTSS 454
Score = 67 bits (161), Expect = 2e-009
Identities = 31/39 (79%), Gaps = 7/39 (17%)
Frame = -2
Query: 559 EKECSYYLRTGQCKFGLTCRFNHPV-------PQQQQQQ 464
EKECSYYLRTGQCKFGLTCRFNHPV PQ QQQQ
Sbjct: 146 EKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQHQQQQ 184
>gi|6437560|gb|AAF08587.1|AC011623_20 hypothetical protein [Arabidopsis
thaliana]
Length = 437
Score = 128 bits (321), Expect = 4e-028
Identities = 73/91 (80%), Positives = 78/91 (85%), Gaps = 2/91 (2%)
Frame = -3
Query: 486 CLSSSSSSSSLSYSPSASSLTDMPVAPYPIGSSSLSGASAPVSSSDVPTTTQAVTAAASA 307
C S SSSLSYSPSASSLTDMPVAPYPIGSSSLSG+SAPVSSS+ P T +AVT A S+
Sbjct: 349 CKFDHSMSSSLSYSPSASSLTDMPVAPYPIGSSSLSGSSAPVSSSNEP-TKEAVTPAVSS 407
Query: 306 PMVSGLSSQEPAETSGDSASVSGSVEAKTSS 214
MVSGLS EPAETSGDSASVSGS+EAKTSS
Sbjct: 408 -MVSGLSRPEPAETSGDSASVSGSIEAKTSS 437
Score = 66 bits (160), Expect = 2e-009
Identities = 31/39 (79%), Gaps = 7/39 (17%)
Frame = -2
Query: 559 EKECSYYLRTGQCKFGLTCRFNHPV-------PQQQQQQ 464
EKECSYYLRTGQCKFGLTCRFNHPV PQQ QQQ
Sbjct: 126 EKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQ 164
>gi|79395677|ref|NP_187292.2| zinc finger CCCH domain-containing protein 34
[Arabidopsis thaliana]
Length = 462
Score = 128 bits (321), Expect = 4e-028
Identities = 73/91 (80%), Positives = 78/91 (85%), Gaps = 2/91 (2%)
Frame = -3
Query: 486 CLSSSSSSSSLSYSPSASSLTDMPVAPYPIGSSSLSGASAPVSSSDVPTTTQAVTAAASA 307
C S SSSLSYSPSASSLTDMPVAPYPIGSSSLSG+SAPVSSS+ P T +AVT A S+
Sbjct: 374 CKFDHSMSSSLSYSPSASSLTDMPVAPYPIGSSSLSGSSAPVSSSNEP-TKEAVTPAVSS 432
Query: 306 PMVSGLSSQEPAETSGDSASVSGSVEAKTSS 214
MVSGLS EPAETSGDSASVSGS+EAKTSS
Sbjct: 433 -MVSGLSRPEPAETSGDSASVSGSIEAKTSS 462
Score = 66 bits (160), Expect = 2e-009
Identities = 31/39 (79%), Gaps = 7/39 (17%)
Frame = -2
Query: 559 EKECSYYLRTGQCKFGLTCRFNHPV-------PQQQQQQ 464
EKECSYYLRTGQCKFGLTCRFNHPV PQQ QQQ
Sbjct: 151 EKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQ 189
>gi|110740437|dbj|BAF02113.1| hypothetical protein [Arabidopsis thaliana]
Length = 462
Score = 126 bits (316), Expect = 2e-027
Identities = 72/91 (79%), Positives = 77/91 (84%), Gaps = 2/91 (2%)
Frame = -3
Query: 486 CLSSSSSSSSLSYSPSASSLTDMPVAPYPIGSSSLSGASAPVSSSDVPTTTQAVTAAASA 307
C S SSSLSYSPSASSLTDMPVAPYPIGSSSLSG+SAPVSSS+ P T +AVT A S+
Sbjct: 374 CKFDHSMSSSLSYSPSASSLTDMPVAPYPIGSSSLSGSSAPVSSSNEP-TKEAVTPAVSS 432
Query: 306 PMVSGLSSQEPAETSGDSASVSGSVEAKTSS 214
MVSGLS EPAETSGDSASVSGS+EAK SS
Sbjct: 433 -MVSGLSRPEPAETSGDSASVSGSIEAKASS 462
Score = 66 bits (160), Expect = 2e-009
Identities = 31/39 (79%), Gaps = 7/39 (17%)
Frame = -2
Query: 559 EKECSYYLRTGQCKFGLTCRFNHPV-------PQQQQQQ 464
EKECSYYLRTGQCKFGLTCRFNHPV PQQ QQQ
Sbjct: 151 EKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQ 189
>gi|297807877|ref|XP_002871822.1| hypothetical protein ARALYDRAFT_488738
[Arabidopsis lyrata subsp. lyrata]
Length = 474
Score = 67 bits (163), Expect = 9e-010
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = -3
Query: 474 SSSSSSLSYSPSASSLTDMPVAPYPIGSSSLSGASAPVSSSDVPTTTQAVTAAASAPMVS 295
S SSSLSYSPS SSLTDMPVAPYP+GSSSL + SSS T+ +++++ P+ +
Sbjct: 371 SLGSSSLSYSPSPSSLTDMPVAPYPLGSSSLGTLAPSSSSSSSDQRTELLSSSSIEPITT 430
Query: 294 GLSSQE--PAETSGDSASVSG 238
S E A S S+ SG
Sbjct: 431 ATSGSETVAAGVSSSSSMTSG 451
Score = 62 bits (148), Expect = 5e-008
Identities = 28/41 (68%), Positives = 32/41 (78%), Gaps = 6/41 (14%)
Frame = -2
Query: 559 EKECSYYLRTGQCKFGLTCRFNHPVP------QQQQQQLFA 455
EKECSY++RTGQCKFG TCR++HPVP QQQQQL A
Sbjct: 149 EKECSYFMRTGQCKFGSTCRYHHPVPPGVQAASQQQQQLSA 189
>gi|79516213|ref|NP_197356.2| zinc finger CCCH domain-containing protein 58
[Arabidopsis thaliana]
Length = 465
Score = 63 bits (152), Expect = 2e-008
Identities = 29/42 (69%), Positives = 33/42 (78%), Gaps = 7/42 (16%)
Frame = -2
Query: 559 EKECSYYLRTGQCKFGLTCRFNHPVP-------QQQQQQLFA 455
EKECSY++RTGQCKFG TCR++HPVP QQQQQQL A
Sbjct: 148 EKECSYFMRTGQCKFGSTCRYHHPVPPGVQAPSQQQQQQLSA 189
>gi|297670004|ref|XP_002813170.1| PREDICTED: hypothetical protein LOC100442257
[Pongo abelii]
Length = 270
Score = 57 bits (137), Expect = 9e-007
Identities = 36/90 (40%), Positives = 54/90 (60%)
Frame = -3
Query: 480 SSSSSSSSLSYSPSASSLTDMPVAPYPIGSSSLSGASAPVSSSDVPTTTQAVTAAASAPM 301
SSSSSSSS S S S+SS + P + SS S +S+P SSS P+++ + +++S+
Sbjct: 90 SSSSSSSSSSSSSSSSSSSSSPSSSRSSSSSPSSSSSSPSSSSSSPSSSSSSPSSSSSSS 149
Query: 300 VSGLSSQEPAETSGDSASVSGSVEAKTSSS 211
S SS P+ +S S+S S S + +SSS
Sbjct: 150 SSSPSSSSPSSSSSSSSSSSSSPSSSSSSS 179
>gi|147818474|emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis
vinifera]
Length = 1388
Score = 57 bits (135), Expect = 2e-006
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = -2
Query: 559 EKECSYYLRTGQCKFGLTCRFNHPVP 482
EKECSYYL+TGQCKFG+TC+F+HP P
Sbjct: 180 EKECSYYLKTGQCKFGITCKFHHPQP 205
>gi|225436765|ref|XP_002267320.1| PREDICTED: hypothetical protein isoform 1
[Vitis vinifera]
Length = 475
Score = 57 bits (135), Expect = 2e-006
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = -2
Query: 559 EKECSYYLRTGQCKFGLTCRFNHPVP 482
EKECSYYL+TGQCKFG+TC+F+HP P
Sbjct: 142 EKECSYYLKTGQCKFGITCKFHHPQP 167
>gi|255551693|ref|XP_002516892.1| nucleic acid binding protein, putative
[Ricinus communis]
Length = 481
Score = 55 bits (132), Expect = 4e-006
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = -2
Query: 559 EKECSYYLRTGQCKFGLTCRFNHPVPQQQQQQ 464
EKEC+YY++TGQCKFG+TC+F+HP P Q Q
Sbjct: 142 EKECTYYVKTGQCKFGVTCKFHHPQPANLQIQ 173
>gi|122207693|sp|Q2R4J4.2|C3H63_ORYSJ RecName: Full=Zinc finger CCCH
domain-containing protein 63; Short=OsC3H63
Length = 444
Score = 55 bits (131), Expect = 5e-006
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = -2
Query: 559 EKECSYYLRTGQCKFGLTCRFNHPVP 482
EKEC+YYLRTGQCKFG TC+F+HP P
Sbjct: 150 EKECAYYLRTGQCKFGSTCKFHHPQP 175
>gi|108864369|gb|ABG22481.1| Zinc finger CCCH type domain containing protein
ZFN, putative, expressed [Oryza sativa Japonica Group]
Length = 406
Score = 55 bits (131), Expect = 5e-006
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = -2
Query: 559 EKECSYYLRTGQCKFGLTCRFNHPVP 482
EKEC+YYLRTGQCKFG TC+F+HP P
Sbjct: 112 EKECAYYLRTGQCKFGSTCKFHHPQP 137
>gi|115485469|ref|NP_001067878.1| Os11g0472000 [Oryza sativa Japonica Group]
Length = 414
Score = 55 bits (131), Expect = 5e-006
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = -2
Query: 559 EKECSYYLRTGQCKFGLTCRFNHPVP 482
EKEC+YYLRTGQCKFG TC+F+HP P
Sbjct: 120 EKECAYYLRTGQCKFGSTCKFHHPQP 145
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,852,374,425,415
Number of Sequences: 15229318
Number of Extensions: 4852374425415
Number of Successful Extensions: 1146330024
Number of sequences better than 0.0: 0
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