BLASTX 7.6.2
Query= UN44754 /QuerySize=686
(685 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G18524.1 | Symbols: MSH2, ATMSH2 | MSH2 (MUTS ... 317 5e-087
TAIR9_protein||AT4G02070.1 | Symbols: MSH6, MSH6-1, ATMSH6 | MSH... 55 4e-008
>TAIR9_protein||AT3G18524.1 | Symbols: MSH2, ATMSH2 | MSH2 (MUTS HOMOLOG 2); ATP
binding / damaged DNA binding / mismatched DNA binding / protein
binding | chr3:6368151-6372409 REVERSE
Length = 938
Score = 317 bits (811), Expect = 5e-087
Identities = 158/181 (87%), Positives = 166/181 (91%), Gaps = 6/181 (3%)
Frame = -3
Query: 683 GLAWAICEHLVQVKKAPTLFATHFHELTALAQANSEVAGNTVGVANFHVSAHIDTESRKL 504
GLAWAICEHLVQVK+APTLFATHFHELTALAQANSEV+GNTVGVANFHVSAHIDTESRKL
Sbjct: 758 GLAWAICEHLVQVKRAPTLFATHFHELTALAQANSEVSGNTVGVANFHVSAHIDTESRKL 817
Query: 503 TMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELEDFSP------REESGKRKS 342
TMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELEDFSP EESGKRKS
Sbjct: 818 TMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELEDFSPSSMIINNEESGKRKS 877
Query: 341 REDDAEEVSRGTSRAHKFLKEFAEIPVDKMELKDSLKRLCELKDELEKDAVDCHWLKQVL 162
REDD +EVSRG RAHKFLKEFA IP+DKMELKDSL+R+ E+KDELEKDA DCHWL+Q L
Sbjct: 878 REDDPDEVSRGAERAHKFLKEFAAIPLDKMELKDSLQRVREMKDELEKDAADCHWLRQFL 937
Query: 161 * 159
*
Sbjct: 938 * 938
>TAIR9_protein||AT4G02070.1 | Symbols: MSH6, MSH6-1, ATMSH6 | MSH6 (MUTS HOMOLOG
6); damaged DNA binding | chr4:906079-912930 FORWARD
Length = 1325
Score = 55 bits (131), Expect = 4e-008
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Frame = -3
Query: 680 LAWAICEHLVQVKKAPTLFATHFHELTALAQANSEVAGNTVGVANFHVSAHIDT---ESR 510
+A ++ EH ++ + F+TH+H L+ Q N + V+ H++ I
Sbjct: 1176 IAESVLEHFIEKVQCRGFFSTHYHRLSVDYQTNPK-------VSLCHMACQIGEGIGGVE 1228
Query: 509 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELE 381
++T LY++ PGAC +S+G++VA A P+ V+ A K+ E E
Sbjct: 1229 EVTFLYRLTPGACPKSYGVNVARLAGLPDYVLQRAVIKSQEFE 1271
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,716,582,878
Number of Sequences: 33410
Number of Extensions: 21716582878
Number of Successful Extensions: 686220138
Number of sequences better than 0.0: 0
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