BLASTX 7.6.2
Query= UN44772 /QuerySize=1126
(1125 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297816516|ref|XP_002876141.1| RNA-binding protein cp33 [Arabi... 300 3e-079
gi|15231200|ref|NP_190806.1| chloroplast RNA-binding protein 33 ... 296 5e-078
gi|17064758|gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [... 295 8e-078
gi|681912|dbj|BAA06523.1| RNA-binding protein cp33 [Arabidopsis ... 293 4e-077
gi|225463276|ref|XP_002264127.1| PREDICTED: hypothetical protein... 248 2e-063
gi|311952|emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [N... 245 2e-062
gi|20009|emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum] 245 2e-062
gi|133249|sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleo... 244 3e-062
gi|147769830|emb|CAN61277.1| hypothetical protein VITISV_002607 ... 240 4e-061
gi|224138286|ref|XP_002322776.1| predicted protein [Populus tric... 236 8e-060
gi|224091455|ref|XP_002309257.1| predicted protein [Populus tric... 235 2e-059
gi|296089370|emb|CBI39142.3| unnamed protein product [Vitis vini... 208 2e-051
gi|118487510|gb|ABK95582.1| unknown [Populus trichocarpa] 201 2e-049
gi|3550485|emb|CAA11894.1| cp33Hv [Hordeum vulgare subsp. vulgare] 198 2e-048
gi|326511132|dbj|BAJ87580.1| predicted protein [Hordeum vulgare ... 198 2e-048
gi|115470657|ref|NP_001058927.1| Os07g0158300 [Oryza sativa Japo... 192 1e-046
gi|242047468|ref|XP_002461480.1| hypothetical protein SORBIDRAFT... 178 2e-042
gi|226497258|ref|NP_001140274.1| hypothetical protein LOC1002723... 175 2e-041
gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays] 175 2e-041
gi|125599171|gb|EAZ38747.1| hypothetical protein OsJ_23149 [Oryz... 169 1e-039
>gi|297816516|ref|XP_002876141.1| RNA-binding protein cp33 [Arabidopsis lyrata
subsp. lyrata]
Length = 330
Score = 300 bits (767), Expect = 3e-079
Identities = 155/187 (82%), Positives = 165/187 (88%), Gaps = 5/187 (2%)
Frame = -1
Query: 900 ADTEDELPVASEDEEEEE----DVKQTTQASGEEGRLYVGNLPYTITSSELSQLFRQAGN 733
A E+E V E+EEE E D KQTTQASGEEGRLYVGNLPYTITSSELSQLF +AGN
Sbjct: 83 ASLEEEEEVEEEEEEEVEEEDADEKQTTQASGEEGRLYVGNLPYTITSSELSQLFGEAGN 142
Query: 732 VVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGERE 553
VVDVQIVYDKVTDRSRGFGFVTMG+IEEAKEAIQMFN+SQIGGRTVKVN PEVPRGGERE
Sbjct: 143 VVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMFNSSQIGGRTVKVNLPEVPRGGERE 202
Query: 552 VMRAAKIRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSR 373
VMR KIRD NRSYVDSPHK+YAGNLGW+LTSQGLKDAF DQPGVLGAKV+YER++GRSR
Sbjct: 203 VMR-TKIRDNNRSYVDSPHKIYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSR 261
Query: 372 GVWFRLF 352
G F F
Sbjct: 262 GFGFISF 268
>gi|15231200|ref|NP_190806.1| chloroplast RNA-binding protein 33 [Arabidopsis
thaliana]
Length = 329
Score = 296 bits (757), Expect = 5e-078
Identities = 152/186 (81%), Positives = 164/186 (88%), Gaps = 4/186 (2%)
Frame = -1
Query: 900 ADTEDELPVASEDEEEEEDV---KQTTQASGEEGRLYVGNLPYTITSSELSQLFRQAGNV 730
A E+E V E +E EE+V KQTTQASGEEGRLYVGNLPYTITSSELSQ+F +AG V
Sbjct: 83 ASVEEEEEVEEEGDEGEEEVEEEKQTTQASGEEGRLYVGNLPYTITSSELSQIFGEAGTV 142
Query: 729 VDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGEREV 550
VDVQIVYDKVTDRSRGFGFVTMGSIEEAKEA+QMFN+SQIGGRTVKVNFPEVPRGGE EV
Sbjct: 143 VDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEV 202
Query: 549 MRAAKIRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRG 370
MR KIRD NRSYVDSPHK+YAGNLGW+LTSQGLKDAF DQPGVLGAKV+YER++GRSRG
Sbjct: 203 MR-TKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRG 261
Query: 369 VWFRLF 352
F F
Sbjct: 262 FGFISF 267
>gi|17064758|gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [Arabidopsis
thaliana]
Length = 329
Score = 295 bits (755), Expect = 8e-078
Identities = 152/186 (81%), Positives = 163/186 (87%), Gaps = 4/186 (2%)
Frame = -1
Query: 900 ADTEDELPVASEDEEEEEDV---KQTTQASGEEGRLYVGNLPYTITSSELSQLFRQAGNV 730
A E+E V E +E EE+V KQTTQASGEEGRLYVGNLPYTITSSELSQ+F +AG V
Sbjct: 83 ASVEEEEEVEEEGDEGEEEVEEEKQTTQASGEEGRLYVGNLPYTITSSELSQIFGEAGTV 142
Query: 729 VDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGEREV 550
VDVQIVYDKVTDRSRGFGFVTMGSIEEAK A+QMFN+SQIGGRTVKVNFPEVPRGGE EV
Sbjct: 143 VDVQIVYDKVTDRSRGFGFVTMGSIEEAKGAMQMFNSSQIGGRTVKVNFPEVPRGGENEV 202
Query: 549 MRAAKIRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRG 370
MR KIRD NRSYVDSPHK+YAGNLGWDLTSQGLKDAF DQPGVLGAKV+YER++GRSRG
Sbjct: 203 MR-TKIRDNNRSYVDSPHKVYAGNLGWDLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRG 261
Query: 369 VWFRLF 352
F F
Sbjct: 262 FGFISF 267
>gi|681912|dbj|BAA06523.1| RNA-binding protein cp33 [Arabidopsis thaliana]
Length = 321
Score = 293 bits (749), Expect = 4e-077
Identities = 151/186 (81%), Positives = 163/186 (87%), Gaps = 4/186 (2%)
Frame = -1
Query: 900 ADTEDELPVASEDEEEEEDV---KQTTQASGEEGRLYVGNLPYTITSSELSQLFRQAGNV 730
A E+E V E +E EE+V KQTTQASGEE RLYVGNLPYTITSSELSQ+F +AG V
Sbjct: 75 ASVEEEEEVEEEGDEGEEEVEEEKQTTQASGEEWRLYVGNLPYTITSSELSQIFGEAGTV 134
Query: 729 VDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGEREV 550
VDVQIVYDKVTDRSRGFGFVTMGSIEEAKEA+QMFN+SQIGGRTVKVNFPEVPRGGE EV
Sbjct: 135 VDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEV 194
Query: 549 MRAAKIRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRG 370
MR KIRD NRSYVDSPHK+YAGNLGW+LTSQGLKDAF DQPGVLGAKV+YER++GRSRG
Sbjct: 195 MR-TKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRG 253
Query: 369 VWFRLF 352
F F
Sbjct: 254 FGFISF 259
>gi|225463276|ref|XP_002264127.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 311
Score = 248 bits (632), Expect = 2e-063
Identities = 135/252 (53%), Positives = 171/252 (67%), Gaps = 7/252 (2%)
Frame = -1
Query: 1089 SSLAYCPSAVAVSPASSTSTFKPLFPS----LRLFNRFP--PKSFKLVASFLNPISLHSN 928
SSL +A A + +SS S P S + + FP PK KL +
Sbjct: 4 SSLNMAAAAAAAAASSSPSLRIPYRISKLSLIPISTHFPSIPKPLKLTTQSAHFPHHLCR 63
Query: 927 TRRHRFSCAADTEDELPVASEDEEEEEDVKQTTQASGEEGRLYVGNLPYTITSSELSQLF 748
T +H+ + E+E E+E++EE+ S E RLYVGNLPY++TSS+L +F
Sbjct: 64 TTQHQDPQLQEEEEEEEEEEEEEQQEEEEDPKVSDSAEASRLYVGNLPYSMTSSQLGDVF 123
Query: 747 RQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPR 568
+AG+V+ V+IVYD+VTDRSRGF FVTMGS++EAKEAI+MF+ SQ+GGRTVKVNFPEVPR
Sbjct: 124 NEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPR 183
Query: 567 GGEREVMRAAKIRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERD 388
GGER VM KIR R +VDSP+K+YAGNL W LTS+GL+DAFAD PG+LGAKV+YER+
Sbjct: 184 GGERAVM-GPKIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADHPGLLGAKVIYERE 242
Query: 387 SGRSRGVWFRLF 352
SGRSRG F F
Sbjct: 243 SGRSRGFGFLSF 254
>gi|311952|emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana
sylvestris]
Length = 319
Score = 245 bits (623), Expect = 2e-062
Identities = 120/183 (65%), Positives = 154/183 (84%), Gaps = 2/183 (1%)
Frame = -1
Query: 897 DTEDELPVASEDEEEEEDVKQTTQA-SGEEGRLYVGNLPYTITSSELSQLFRQAGNVVDV 721
D E+E+ +++E+EEE E+ +++ ++ S E GRLYVGNLP+++TSS+LS++F +AG V +V
Sbjct: 79 DDEEEVALSAEEEEEIEEKEESVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANV 138
Query: 720 QIVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRA 541
+IVYD+VTDRSRGF FVTMGS+EEAKEAI++F+ SQ+GGRTVKVNFPEVPRGGEREVM +
Sbjct: 139 EIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVM-S 197
Query: 540 AKIRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRGVWF 361
AKIR + +VDSPHKLY NL W LTSQGL+DAFADQPG + AKV+Y+R SGRSRG F
Sbjct: 198 AKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGF 257
Query: 360 RLF 352
F
Sbjct: 258 ITF 260
>gi|20009|emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum]
Length = 292
Score = 245 bits (623), Expect = 2e-062
Identities = 120/183 (65%), Positives = 154/183 (84%), Gaps = 2/183 (1%)
Frame = -1
Query: 897 DTEDELPVASEDEEEEEDVKQTTQA-SGEEGRLYVGNLPYTITSSELSQLFRQAGNVVDV 721
D E+E+ +++E+EEE E+ +++ ++ S E GRLYVGNLP+++TSS+LS++F +AG V +V
Sbjct: 73 DDEEEVALSAEEEEEIEEKEESVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANV 132
Query: 720 QIVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRA 541
+IVYD+VTDRSRGF FVTMGS+EEAKEAI++F+ SQ+GGRTVKVNFPEVPRGGEREVM +
Sbjct: 133 EIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVM-S 191
Query: 540 AKIRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRGVWF 361
AKIR + +VDSPHKLY NL W LTSQGL+DAFADQPG + AKV+Y+R SGRSRG F
Sbjct: 192 AKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGF 251
Query: 360 RLF 352
F
Sbjct: 252 ITF 254
>gi|133249|sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein,
chloroplastic; Flags: Precursor
Length = 324
Score = 244 bits (621), Expect = 3e-062
Identities = 121/183 (66%), Positives = 151/183 (82%), Gaps = 2/183 (1%)
Frame = -1
Query: 897 DTEDELPVASEDEEE-EEDVKQTTQASGEEGRLYVGNLPYTITSSELSQLFRQAGNVVDV 721
D E+E+ +++E+EEE EE ++ S E GRLYVGNLP+++TSS+LS++F +AG V +V
Sbjct: 84 DDEEEVALSAEEEEEIEEKEERVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANV 143
Query: 720 QIVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRA 541
+IVYD+VTDRSRGF FVTMGS+EEAKEAI++F+ SQ+GGRTVKVNFPEVPRGGEREVM +
Sbjct: 144 EIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVM-S 202
Query: 540 AKIRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRGVWF 361
AKIR + +VDSPHKLY NL W LTSQGL+DAFADQPG + AKV+Y+R SGRSRG F
Sbjct: 203 AKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGF 262
Query: 360 RLF 352
F
Sbjct: 263 ITF 265
>gi|147769830|emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis
vinifera]
Length = 454
Score = 240 bits (611), Expect = 4e-061
Identities = 117/182 (64%), Positives = 145/182 (79%), Gaps = 1/182 (0%)
Frame = -1
Query: 897 DTEDELPVASEDEEEEEDVKQTTQASGEEGRLYVGNLPYTITSSELSQLFRQAGNVVDVQ 718
+ E+E E+E++EE+ S E RLYVGNLPY++TSS+L +F +AG+V+ V+
Sbjct: 217 EEEEEEEEEEEEEQQEEEEDPKVSDSAEASRLYVGNLPYSMTSSQLGXVFNEAGSVISVE 276
Query: 717 IVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRAA 538
IVYD+VTDRSRGF FVTMGS++EAKEAI+MF+ SQ+GGRTVKVNFPEVPRGGER VM
Sbjct: 277 IVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVM-GP 335
Query: 537 KIRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRGVWFR 358
KIR R +VDSP+K+YAGNL W LTS+GL+DAFAD PG+LGAKV+YER+SGRSRG F
Sbjct: 336 KIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADXPGLLGAKVIYERESGRSRGFGFL 395
Query: 357 LF 352
F
Sbjct: 396 SF 397
>gi|224138286|ref|XP_002322776.1| predicted protein [Populus trichocarpa]
Length = 324
Score = 236 bits (600), Expect = 8e-060
Identities = 129/252 (51%), Positives = 171/252 (67%), Gaps = 7/252 (2%)
Frame = -1
Query: 1095 KMSSLAYCPSAVAVSPASSTSTF----KPLFPSLRLFNRFPPKSFKLVASFLNPISLHSN 928
K+S L++ S + + + F KPL + + N P A+F N
Sbjct: 19 KLSKLSFTHSQLLIPSYFLSKPFLKPLKPLKLNSQNSNSLPHSHGTFAATFDNFEVETDE 78
Query: 927 TRRHRFSCAADTEDELPVASEDEEEEEDVKQTTQASGEEGRLYVGNLPYTITSSELSQLF 748
+ ++T++ E+EEEEEDV + EEG+LYVGNLPY++TSSEL+++F
Sbjct: 79 NIAAQDDPQSETDEFDQEIVEEEEEEEDV--VAIKAREEGKLYVGNLPYSMTSSELAEVF 136
Query: 747 RQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPR 568
+AG V +++ D+VTDRSRGFGFVTM S+EEAKEAI+MFN SQ+GGRT++VNFPEVPR
Sbjct: 137 EEAGRVFGAEVICDRVTDRSRGFGFVTMESVEEAKEAIRMFNGSQVGGRTLRVNFPEVPR 196
Query: 567 GGEREVMRAAKIRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERD 388
GGEREVM +IR G + ++DS HK+YAGNLGW LTS+GL DAFA+QPG+L AKV+YERD
Sbjct: 197 GGEREVME-PRIRSGYKGFIDSEHKIYAGNLGWRLTSEGLGDAFANQPGLLSAKVIYERD 255
Query: 387 SGRSRGVWFRLF 352
+GRSRG F F
Sbjct: 256 TGRSRGFGFVSF 267
>gi|224091455|ref|XP_002309257.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 235 bits (597), Expect = 2e-059
Identities = 131/256 (51%), Positives = 174/256 (67%), Gaps = 13/256 (5%)
Frame = -1
Query: 1095 KMSSLAYCPSAVAV-SPASSTSTFKPLFPSLRLFNRFPPKSFKLVA-------SFLNPIS 940
K+S+L++ S + + S SS KPL P N S L++ + S
Sbjct: 14 KLSNLSFTHSPLPLPSHFSSKPLLKPLKPP--QLNNHDSNSLSLLSLPHFHGIFAASSDS 71
Query: 939 LHSNTRRHRFSCAADTEDELPVASEDEEEEEDVKQTTQASGEEGRLYVGNLPYTITSSEL 760
S T + + D + E ++ EEE + +A+ EEG+LYVGNLPY++TSSEL
Sbjct: 72 FESGTEENT-TALDDPQSETDEFDQEIVEEEGDVEAIKAT-EEGKLYVGNLPYSMTSSEL 129
Query: 759 SQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFP 580
+++F +AG V +++YD+VTDRSRGFGFVTMGS+EEAK+AIQMFN +Q GGR+V+VNFP
Sbjct: 130 TEVFEEAGRVFSAEVIYDRVTDRSRGFGFVTMGSVEEAKKAIQMFNGTQFGGRSVRVNFP 189
Query: 579 EVPRGGEREVMRAAKIRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVV 400
EVPRGGEREVM +I+ G + ++DS HK+YAGNLGW LTS+GL+DAFA+QPGVL AKV+
Sbjct: 190 EVPRGGEREVM-GPRIQSGYKGFIDSEHKIYAGNLGWRLTSEGLRDAFANQPGVLSAKVI 248
Query: 399 YERDSGRSRGVWFRLF 352
YERDS RSRG F F
Sbjct: 249 YERDSRRSRGFGFVSF 264
>gi|296089370|emb|CBI39142.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 208 bits (527), Expect = 2e-051
Identities = 100/142 (70%), Positives = 121/142 (85%), Gaps = 1/142 (0%)
Frame = -1
Query: 777 ITSSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRT 598
+TSS+L +F +AG+V+ V+IVYD+VTDRSRGF FVTMGS++EAKEAI+MF+ SQ+GGRT
Sbjct: 1 MTSSQLGDVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRT 60
Query: 597 VKVNFPEVPRGGEREVMRAAKIRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGV 418
VKVNFPEVPRGGER VM KIR R +VDSP+K+YAGNL W LTS+GL+DAFAD PG+
Sbjct: 61 VKVNFPEVPRGGERAVM-GPKIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADHPGL 119
Query: 417 LGAKVVYERDSGRSRGVWFRLF 352
LGAKV+YER+SGRSRG F F
Sbjct: 120 LGAKVIYERESGRSRGFGFLSF 141
>gi|118487510|gb|ABK95582.1| unknown [Populus trichocarpa]
Length = 198
Score = 201 bits (511), Expect = 2e-049
Identities = 96/142 (67%), Positives = 120/142 (84%), Gaps = 1/142 (0%)
Frame = -1
Query: 777 ITSSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRT 598
+TSSEL+++F +AG V +++ D+VTDRSRGFGFVTM S+EEAKEAI+MFN SQ+GGRT
Sbjct: 1 MTSSELAEVFEEAGRVFGAEVICDRVTDRSRGFGFVTMESVEEAKEAIRMFNGSQVGGRT 60
Query: 597 VKVNFPEVPRGGEREVMRAAKIRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGV 418
++VNFPEVPRGGEREVM +IR G + ++DS HK+YAGNLGW LTS+GL DAFA+QPG+
Sbjct: 61 LRVNFPEVPRGGEREVME-PRIRSGYKGFIDSEHKIYAGNLGWRLTSEGLGDAFANQPGL 119
Query: 417 LGAKVVYERDSGRSRGVWFRLF 352
L AKV+YERD+GRSRG F F
Sbjct: 120 LSAKVIYERDTGRSRGFGFVSF 141
>gi|3550485|emb|CAA11894.1| cp33Hv [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 198 bits (502), Expect = 2e-048
Identities = 102/178 (57%), Positives = 129/178 (72%), Gaps = 6/178 (3%)
Frame = -1
Query: 867 EDEEEEEDVK-----QTTQASGEE-GRLYVGNLPYTITSSELSQLFRQAGNVVDVQIVYD 706
E E E E V+ + A G+E GR+YVGNLPYT T++EL+ F +AG+V DVQI+YD
Sbjct: 83 EAEPEVEAVRGYYPPRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYD 142
Query: 705 KVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRAAKIRD 526
K+TDRSRGF FVTM + EEA +A+QMFN + +GGRTV+VNFPEVPRGGER V AA R
Sbjct: 143 KITDRSRGFAFVTMATAEEAAKAVQMFNGALLGGRTVRVNFPEVPRGGERAVASAAVART 202
Query: 525 GNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRGVWFRLF 352
R D +K+YAGNLGW + + LK AF QPG++GA+V++ERD+GRSRG F F
Sbjct: 203 SLRVVDDGTYKVYAGNLGWGVRADALKTAFEGQPGLVGARVIFERDTGRSRGFGFVSF 260
>gi|326511132|dbj|BAJ87580.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 344
Score = 198 bits (502), Expect = 2e-048
Identities = 102/178 (57%), Positives = 129/178 (72%), Gaps = 6/178 (3%)
Frame = -1
Query: 867 EDEEEEEDVK-----QTTQASGEE-GRLYVGNLPYTITSSELSQLFRQAGNVVDVQIVYD 706
E E E E V+ + A G+E GR+YVGNLPYT T++EL+ F +AG+V DVQI+YD
Sbjct: 83 EAEPEVEAVRGYYPPRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYD 142
Query: 705 KVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRAAKIRD 526
K+TDRSRGF FVTM + EEA +A+QMFN + +GGRTV+VNFPEVPRGGER V AA R
Sbjct: 143 KITDRSRGFAFVTMATAEEAAKAVQMFNGALLGGRTVRVNFPEVPRGGERAVASAAVART 202
Query: 525 GNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRGVWFRLF 352
R D +K+YAGNLGW + + LK AF QPG++GA+V++ERD+GRSRG F F
Sbjct: 203 SLRVVDDGTYKVYAGNLGWGVRADALKTAFEGQPGLVGARVIFERDTGRSRGFGFVSF 260
>gi|115470657|ref|NP_001058927.1| Os07g0158300 [Oryza sativa Japonica Group]
Length = 348
Score = 192 bits (487), Expect = 1e-046
Identities = 96/155 (61%), Positives = 116/155 (74%), Gaps = 2/155 (1%)
Frame = -1
Query: 816 EEGRLYVGNLPYTITSSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEA 637
E GRL+VGNLPYT+TS E+SQ F +AG V +VQI+YDKVTDRSRGF FVTM + EEA A
Sbjct: 116 EPGRLFVGNLPYTMTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVTMATAEEAATA 175
Query: 636 IQMFNTSQIGGRTVKVNFPEVPRGGEREVMRAAKIRDGNRSYVDSPHKLYAGNLGWDLTS 457
IQMFN + +GGRT +VN+PEVPRGGER V AA R+ R D K+YAGNLGW + +
Sbjct: 176 IQMFNGALLGGRTARVNYPEVPRGGERAVGSAAATRENRRD--DGTFKIYAGNLGWGVRA 233
Query: 456 QGLKDAFADQPGVLGAKVVYERDSGRSRGVWFRLF 352
L+ AF QPG+L A+V++ERDSGRSRG F F
Sbjct: 234 DALRAAFEGQPGLLDARVIFERDSGRSRGFGFVSF 268
>gi|242047468|ref|XP_002461480.1| hypothetical protein SORBIDRAFT_02g003310
[Sorghum bicolor]
Length = 338
Score = 178 bits (450), Expect = 2e-042
Identities = 95/181 (52%), Positives = 127/181 (70%), Gaps = 13/181 (7%)
Frame = -1
Query: 873 ASEDEEEEEDVK-----QTTQASGEE-GRLYVGNLPYTITSSELSQLFRQAGNVVDVQIV 712
ASE EEE E + ++ G++ GRL+VGNLPYT TS EL+Q+F +AG V D QI+
Sbjct: 83 ASESEEEAEAPRAYSPPRSRPTRGDDPGRLFVGNLPYTYTSEELAQVFAEAGRVDDAQII 142
Query: 711 YDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGERE-VMRAAK 535
YDKVT+RSRGF FVTM + EEA +AIQMF+ + +GGRT +VN+PEVPRGGER V A +
Sbjct: 143 YDKVTNRSRGFAFVTMATAEEAAKAIQMFDGALLGGRTARVNYPEVPRGGERRTVTMAGR 202
Query: 534 IRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRGVWFRL 355
RD D +K+YAGNLGW + + L++ F + G+L A+V++ER++GRSRG F
Sbjct: 203 RRD------DGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVS 256
Query: 354 F 352
F
Sbjct: 257 F 257
>gi|226497258|ref|NP_001140274.1| hypothetical protein LOC100272318 [Zea mays]
Length = 341
Score = 175 bits (442), Expect = 2e-041
Identities = 92/180 (51%), Positives = 122/180 (67%), Gaps = 13/180 (7%)
Frame = -1
Query: 870 SEDEEEEE------DVKQTTQASGEEGRLYVGNLPYTITSSELSQLFRQAGNVVDVQIVY 709
SE EEE E + + GRL+VGNLPYT TS EL+Q+F +AG V D QI+Y
Sbjct: 86 SEPEEEAEAPRAYSSPRSRPPRGDDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIY 145
Query: 708 DKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGERE-VMRAAKI 532
DKVT+RSRGF FVTM + EEA +AIQMF+ + +GGRT +VN+PEVPRGGER V + +
Sbjct: 146 DKVTNRSRGFAFVTMATAEEAAKAIQMFDGALLGGRTARVNYPEVPRGGERRTVTMSGRR 205
Query: 531 RDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRGVWFRLF 352
RD D +K+YAGNLGW + + L++ F + G+L A+V++ER++GRSRG F F
Sbjct: 206 RD------DGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSF 259
>gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays]
Length = 341
Score = 175 bits (442), Expect = 2e-041
Identities = 92/180 (51%), Positives = 122/180 (67%), Gaps = 13/180 (7%)
Frame = -1
Query: 870 SEDEEEEE------DVKQTTQASGEEGRLYVGNLPYTITSSELSQLFRQAGNVVDVQIVY 709
SE EEE E + + GRL+VGNLPYT TS EL+Q+F +AG V D QI+Y
Sbjct: 86 SEPEEEAEAPRAYSSPRSRPPRGDDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIY 145
Query: 708 DKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGERE-VMRAAKI 532
DKVT+RSRGF FVTM + EEA +AIQMF+ + +GGRT +VN+PEVPRGGER V + +
Sbjct: 146 DKVTNRSRGFAFVTMATAEEAAKAIQMFDGALLGGRTARVNYPEVPRGGERRTVTMSGRR 205
Query: 531 RDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRGVWFRLF 352
RD D +K+YAGNLGW + + L++ F + G+L A+V++ER++GRSRG F F
Sbjct: 206 RD------DGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSF 259
>gi|125599171|gb|EAZ38747.1| hypothetical protein OsJ_23149 [Oryza sativa
Japonica Group]
Length = 220
Score = 169 bits (426), Expect = 1e-039
Identities = 85/142 (59%), Positives = 104/142 (73%), Gaps = 2/142 (1%)
Frame = -1
Query: 777 ITSSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRT 598
+TS E+SQ F +AG V +VQI+YDKVTDRSRGF FVTM + EEA AIQMFN + +GGRT
Sbjct: 1 MTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVTMATAEEAATAIQMFNGALLGGRT 60
Query: 597 VKVNFPEVPRGGEREVMRAAKIRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGV 418
+VN+PEVPRGGER V AA R+ R D K+YAGNLGW + + L+ AF QPG+
Sbjct: 61 ARVNYPEVPRGGERAVGSAAATRENRRD--DGTFKIYAGNLGWGVRADALRAAFEGQPGL 118
Query: 417 LGAKVVYERDSGRSRGVWFRLF 352
L A+V++ERDSGRSRG F F
Sbjct: 119 LDARVIFERDSGRSRGFGFVSF 140
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,939,538,178,972
Number of Sequences: 15229318
Number of Extensions: 4939538178972
Number of Successful Extensions: 1157257337
Number of sequences better than 0.0: 0
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