BLASTX 7.6.2
Query= UN44772 /QuerySize=1126
(1125 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA b... 296 2e-080
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 127 2e-029
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 97 2e-020
TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotei... 92 4e-019
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 86 4e-017
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 86 4e-017
TAIR9_protein||AT5G06210.1 | Symbols: | RNA-binding protein, pu... 83 3e-016
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 75 7e-014
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine... 70 3e-012
TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-bindin... 68 8e-012
TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP... 63 3e-010
TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD,... 63 3e-010
>TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA binding |
chr3:19421619-19422855 FORWARD
Length = 330
Score = 296 bits (757), Expect = 2e-080
Identities = 152/186 (81%), Positives = 164/186 (88%), Gaps = 4/186 (2%)
Frame = -1
Query: 900 ADTEDELPVASEDEEEEEDV---KQTTQASGEEGRLYVGNLPYTITSSELSQLFRQAGNV 730
A E+E V E +E EE+V KQTTQASGEEGRLYVGNLPYTITSSELSQ+F +AG V
Sbjct: 83 ASVEEEEEVEEEGDEGEEEVEEEKQTTQASGEEGRLYVGNLPYTITSSELSQIFGEAGTV 142
Query: 729 VDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGEREV 550
VDVQIVYDKVTDRSRGFGFVTMGSIEEAKEA+QMFN+SQIGGRTVKVNFPEVPRGGE EV
Sbjct: 143 VDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEV 202
Query: 549 MRAAKIRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRG 370
MR KIRD NRSYVDSPHK+YAGNLGW+LTSQGLKDAF DQPGVLGAKV+YER++GRSRG
Sbjct: 203 MR-TKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRG 261
Query: 369 VWFRLF 352
F F
Sbjct: 262 FGFISF 267
Score = 89 bits (219), Expect = 5e-018
Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 18/104 (17%)
Frame = -1
Query: 1086 SLAYCPSAVAVS---PASSTSTFKPLFPS---LRLFNRFPPKSFKLVASFLNPISLHSNT 925
S AYC SAVAVS ASS +TF PL S +LF RF PKSFKLVA+ NP+ LHSN
Sbjct: 2 SSAYCSSAVAVSAAATASSAATFNPLLSSHSNSQLFYRFTPKSFKLVANCPNPLILHSNI 61
Query: 924 RRHRFSCAADTE-----DELPVASEDEEEEEDVKQTTQASGEEG 808
RRHRF CAA+TE DE+ + E+EEE E+ G+EG
Sbjct: 62 RRHRFFCAAETEASSADDEIQASVEEEEEVEE-------EGDEG 98
Score = 83 bits (204), Expect = 2e-016
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
Frame = -2
Query: 407 KSCMKETAGGLGGFGFVSFESAQDLQSALRAMNGVEVEGRELRLNLTSER--ATVSRPSV 234
K + G GFGF+SFESA+++QSAL MNGVEVEGR LRLNL SER TVS PSV
Sbjct: 249 KVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASEREKPTVSPPSV 308
Query: 233 TE---EGSSLESSEMISNIST* 177
E E +SLES+E++SN+S *
Sbjct: 309 EEGETEEASLESNEVLSNVSA* 330
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 127 bits (317), Expect = 2e-029
Identities = 70/177 (39%), Positives = 105/177 (59%), Gaps = 17/177 (9%)
Frame = -1
Query: 870 SEDEEEEEDVKQTTQAS-------GEEGRLYVGNLPYTITSSELSQLFRQAGNVVDVQIV 712
SE +E E DV + + EE +L+VGNL Y + S L+ LF QAG V +++
Sbjct: 123 SEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVI 182
Query: 711 YDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRAAKI 532
Y++ TD+SRGFGFVTM S++EA+ A++ FN + GR + VN PRG E RA ++
Sbjct: 183 YNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN-KAAPRGSRPE--RAPRV 239
Query: 531 RDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRGVWF 361
+ ++Y GNL WD+ + L+ F++ V+ A+VVY+R++GRSRG F
Sbjct: 240 -------YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGF 289
Score = 84 bits (205), Expect = 2e-016
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Frame = -1
Query: 807 RLYVGNLPYTITSSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQM 628
R+YVGNLP+ + + L QLF + G VV+ ++VYD+ T RSRGFGFVTM ++E EAI
Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304
Query: 627 FNTSQIGGRTVKVNFPE--VPRGG 562
+ + GR ++VN E PR G
Sbjct: 305 LDGQNLEGRAIRVNVAEERPPRRG 328
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 97 bits (239), Expect = 2e-020
Identities = 65/177 (36%), Positives = 93/177 (52%), Gaps = 17/177 (9%)
Frame = -1
Query: 987 PPKSFKLVASFLN-PISLHSNTRRHRFSCAADTEDELPVASEDEEEEEDVKQTT----QA 823
P SFKL + ++ I+ N+ RF+ + + SE E EE+ Q+
Sbjct: 33 PSLSFKLNSDSVSFSIAAKWNSPASRFA------RNVAITSEFEVEEDGFADVAPPKEQS 86
Query: 822 SGEEGRLYVGNLPYTITSSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAK 643
+ +L+VGNLP+ + S++L+QLF AGNV V+++YDK+T RSRGFGFVTM S+ E +
Sbjct: 87 FSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVE 146
Query: 642 EAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRAAKIRDGNRSYVDSPHKLYAGNLG 472
A Q FN ++ GR ++VN P E R G RS S Y G G
Sbjct: 147 AAAQQFNGYELDGRPLRVNAGPPPPKREDGFSR------GPRSSFGSSGSGYGGGGG 197
Score = 69 bits (168), Expect = 4e-012
Identities = 31/82 (37%), Positives = 52/82 (63%)
Frame = -1
Query: 822 SGEEGRLYVGNLPYTITSSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAK 643
+G R+YVGNL + + L LF + G VV+ +++YD+ + RS+GFGFVT S +E +
Sbjct: 200 AGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQ 259
Query: 642 EAIQMFNTSQIGGRTVKVNFPE 577
AI+ + + + GR ++V+ E
Sbjct: 260 NAIKSLDGADLDGRQIRVSEAE 281
>TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein RNP-T, putative / RNA-binding protein
1/2/3, putative / RNA-binding protein cp31, putative |
chr5:20452677-20453965 REVERSE
Length = 290
Score = 92 bits (228), Expect = 4e-019
Identities = 43/88 (48%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = -1
Query: 816 EEGRLYVGNLPYTITSSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEA 637
EE +L+VGNLPY + S L+ LF QAG V +++Y++ TD+SRGFGFVTM ++EEA++A
Sbjct: 111 EEAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKA 170
Query: 636 IQMFNTSQIGGRTVKVNFPEVPRGGERE 553
++ FN+ ++ GR + VN PRG E
Sbjct: 171 VEKFNSFEVNGRRLTVN-RAAPRGSRPE 197
Score = 75 bits (182), Expect = 9e-014
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = -1
Query: 807 RLYVGNLPYTITSSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQM 628
R+YVGNLP+ + S L +LF + G VVD ++V D+ T RSRGFGFV M + E AI
Sbjct: 208 RIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAA 267
Query: 627 FNTSQIGGRTVKVNFPE 577
+ + GR +KVN E
Sbjct: 268 LDGQNLEGRAIKVNVAE 284
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 86 bits (211), Expect = 4e-017
Identities = 42/91 (46%), Positives = 58/91 (63%)
Frame = -1
Query: 807 RLYVGNLPYTITSSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQM 628
+L+VGNL + + S++L+QLF AGNV V+++YDKVT RSRGFGFVTM + E + A Q
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 627 FNTSQIGGRTVKVNFPEVPRGGEREVMRAAK 535
FN + GR ++VN P E R +
Sbjct: 160 FNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190
Score = 77 bits (189), Expect = 1e-014
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Frame = -1
Query: 822 SGEEGRLYVGNLPYTITSSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAK 643
SG RLYVGNL + + L LF + G VV+ +++YD+ + RS+GFGFVT+ S +E +
Sbjct: 253 SGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQ 312
Query: 642 EAIQMFNTSQIGGRTVKVNFPEV--PRG 565
+AI N + + GR ++V+ E PRG
Sbjct: 313 KAINSLNGADLDGRQIRVSEAEARPPRG 340
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 86 bits (211), Expect = 4e-017
Identities = 42/91 (46%), Positives = 58/91 (63%)
Frame = -1
Query: 807 RLYVGNLPYTITSSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQM 628
+L+VGNL + + S++L+QLF AGNV V+++YDKVT RSRGFGFVTM + E + A Q
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 627 FNTSQIGGRTVKVNFPEVPRGGEREVMRAAK 535
FN + GR ++VN P E R +
Sbjct: 160 FNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190
Score = 77 bits (189), Expect = 1e-014
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Frame = -1
Query: 822 SGEEGRLYVGNLPYTITSSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAK 643
SG RLYVGNL + + L LF + G VV+ +++YD+ + RS+GFGFVT+ S +E +
Sbjct: 253 SGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQ 312
Query: 642 EAIQMFNTSQIGGRTVKVNFPEV--PRG 565
+AI N + + GR ++V+ E PRG
Sbjct: 313 KAINSLNGADLDGRQIRVSEAEARPPRG 340
>TAIR9_protein||AT5G06210.1 | Symbols: | RNA-binding protein, putative |
chr5:1878497-1879515 FORWARD
Length = 147
Score = 83 bits (203), Expect = 3e-016
Identities = 38/83 (45%), Positives = 56/83 (67%)
Frame = -1
Query: 831 TQASGEEGRLYVGNLPYTITSSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIE 652
TQ G +L++G L + T LS+ F + G VV+ QIV D+V+DRS+GFGFVT S +
Sbjct: 27 TQRRGVASKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASAD 86
Query: 651 EAKEAIQMFNTSQIGGRTVKVNF 583
EA++A+ FN Q+ GRT+ V++
Sbjct: 87 EAQKALMEFNGQQLNGRTIFVDY 109
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 75 bits (183), Expect = 7e-014
Identities = 40/128 (31%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Frame = -1
Query: 948 PISLHSNTRRHRFSCAADTEDELPVASEDEEEEEDVKQTTQ-ASGEEGRLYVGNLPYTIT 772
P+ + S + RF ++T + V E+EE+++ + +LY GNLPY +
Sbjct: 41 PLLISSRSCSRRFRVLSET---ITVKLEEEEKDDGASAVLDPPAAVNTKLYFGNLPYNVD 97
Query: 771 SSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVK 592
S+ L+Q+ + N V+++Y++ T +SRGF FVTM ++E+ I + ++ GR +K
Sbjct: 98 SATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALK 157
Query: 591 VNFPEVPR 568
VNF + P+
Sbjct: 158 VNFADKPK 165
Score = 70 bits (169), Expect = 3e-012
Identities = 32/79 (40%), Positives = 52/79 (65%)
Frame = -1
Query: 813 EGRLYVGNLPYTITSSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAI 634
E +L+VGNL +T+TS L+ FR+ G+VV ++V+D T RSRG+GFV S E + A+
Sbjct: 176 EHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETAL 235
Query: 633 QMFNTSQIGGRTVKVNFPE 577
+ + ++ GR ++VN +
Sbjct: 236 ESLDGFELEGRAIRVNLAQ 254
>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
RNA-binding protein 3); ATP binding / RNA binding |
chr5:24560870-24562152 FORWARD
Length = 310
Score = 70 bits (169), Expect = 3e-012
Identities = 32/75 (42%), Positives = 47/75 (62%)
Frame = -1
Query: 807 RLYVGNLPYTITSSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQM 628
+L++G + Y++ L + F + G VVD +++ D+ T RSRGFGFVT S E A AIQ
Sbjct: 41 KLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQA 100
Query: 627 FNTSQIGGRTVKVNF 583
+ + GR VKVN+
Sbjct: 101 LDGRDLHGRVVKVNY 115
>TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-binding protein,
putative | chr4:8022601-8023162 FORWARD
Length = 88
Score = 68 bits (165), Expect = 8e-012
Identities = 35/73 (47%), Positives = 45/73 (61%)
Frame = -1
Query: 807 RLYVGNLPYTITSSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQM 628
R+YVGNL T T L + F GNVVD ++ D+ TDRSRGFGFVT S EA+ A+
Sbjct: 4 RVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSG 63
Query: 627 FNTSQIGGRTVKV 589
+ ++ GR V V
Sbjct: 64 MDGKELNGRRVSV 76
>TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | CCR2 (COLD,
CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 177
Score = 63 bits (152), Expect = 3e-010
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = -1
Query: 825 ASGE-EGRLYVGNLPYTITSSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEE 649
ASG+ E R +VG L + L F Q G+V+D +I+ D+ T RSRGFGFVT +
Sbjct: 2 ASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKA 61
Query: 648 AKEAIQMFNTSQIGGRTVKVN 586
K+AI+ N + GR++ VN
Sbjct: 62 MKDAIEGMNGQDLDGRSITVN 82
>TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD, CIRCADIAN
RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 160
Score = 63 bits (152), Expect = 3e-010
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = -1
Query: 825 ASGE-EGRLYVGNLPYTITSSELSQLFRQAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEE 649
ASG+ E R +VG L + L F Q G+V+D +I+ D+ T RSRGFGFVT +
Sbjct: 2 ASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKA 61
Query: 648 AKEAIQMFNTSQIGGRTVKVN 586
K+AI+ N + GR++ VN
Sbjct: 62 MKDAIEGMNGQDLDGRSITVN 82
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,716,582,878
Number of Sequences: 33410
Number of Extensions: 21716582878
Number of Successful Extensions: 686220138
Number of sequences better than 0.0: 0
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