BLASTX 7.6.2
Query= UN44943 /QuerySize=679
(678 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15229855|ref|NP_187783.1| DnaQ-like 3'-5' exonuclease domain-... 171 1e-040
gi|297833964|ref|XP_002884864.1| hypothetical protein ARALYDRAFT... 169 5e-040
gi|15240056|ref|NP_196263.1| DnaQ-like exonuclease domain-contai... 143 2e-032
gi|48425930|pdb|1VK0|A Chain A, X-Ray Structure Of Gene Product ... 143 2e-032
gi|297810747|ref|XP_002873257.1| hypothetical protein ARALYDRAFT... 138 1e-030
gi|255561991|ref|XP_002522004.1| glycogenin, putative [Ricinus c... 63 3e-008
>gi|15229855|ref|NP_187783.1| DnaQ-like 3'-5' exonuclease domain-containing
protein [Arabidopsis thaliana]
Length = 200
Score = 171 bits (432), Expect = 1e-040
Identities = 85/86 (98%)
Frame = -3
Query: 484 DNLKDLYRFFASKFVTFVGVQIQEDLVLLKENHGIVIRSSLEIGKLAAKARGTPIVEFLG 305
DNLKDLYRFFASKFVTFVGVQIQEDL LLKENHGIVIRSSLEIGKLAAKARGTPIVEFLG
Sbjct: 90 DNLKDLYRFFASKFVTFVGVQIQEDLALLKENHGIVIRSSLEIGKLAAKARGTPIVEFLG 149
Query: 304 TRELAHKILWYDMSRLDSIQSKWDEA 227
TRELAHKILWYDMSRLDSIQSKWDEA
Sbjct: 150 TRELAHKILWYDMSRLDSIQSKWDEA 175
>gi|297833964|ref|XP_002884864.1| hypothetical protein ARALYDRAFT_897381
[Arabidopsis lyrata subsp. lyrata]
Length = 200
Score = 169 bits (426), Expect = 5e-040
Identities = 84/87 (96%), Positives = 85/87 (97%)
Frame = -3
Query: 487 TDNLKDLYRFFASKFVTFVGVQIQEDLVLLKENHGIVIRSSLEIGKLAAKARGTPIVEFL 308
+DNLKDLYRFFASKFVTFVGVQIQEDL LLKENHGIVIRSSLEIGKLAA ARGTPIVEFL
Sbjct: 89 SDNLKDLYRFFASKFVTFVGVQIQEDLALLKENHGIVIRSSLEIGKLAAVARGTPIVEFL 148
Query: 307 GTRELAHKILWYDMSRLDSIQSKWDEA 227
GTRELAHKILWYDMSRLDSIQSKWDEA
Sbjct: 149 GTRELAHKILWYDMSRLDSIQSKWDEA 175
>gi|15240056|ref|NP_196263.1| DnaQ-like exonuclease domain-containing protein
[Arabidopsis thaliana]
Length = 206
Score = 143 bits (360), Expect = 2e-032
Identities = 65/89 (73%), Positives = 83/89 (93%)
Frame = -3
Query: 484 DNLKDLYRFFASKFVTFVGVQIQEDLVLLKENHGIVIRSSLEIGKLAAKARGTPIVEFLG 305
DNLKDLYRFFASKFVTFVGVQI+EDL LL+ENHG+VIR+++ +GKLAA+ARGT ++EFLG
Sbjct: 95 DNLKDLYRFFASKFVTFVGVQIEEDLDLLRENHGLVIRNAINVGKLAAEARGTLVLEFLG 154
Query: 304 TRELAHKILWYDMSRLDSIQSKWDEAGGE 218
TRELAH++LW D+ +LDSI++KW++AG E
Sbjct: 155 TRELAHRVLWSDLGQLDSIEAKWEKAGPE 183
>gi|48425930|pdb|1VK0|A Chain A, X-Ray Structure Of Gene Product From
Arabidopsis Thaliana At5g06450
Length = 206
Score = 143 bits (360), Expect = 2e-032
Identities = 65/89 (73%), Positives = 83/89 (93%)
Frame = -3
Query: 484 DNLKDLYRFFASKFVTFVGVQIQEDLVLLKENHGIVIRSSLEIGKLAAKARGTPIVEFLG 305
DNLKDLYRFFASKFVTFVGVQI+EDL LL+ENHG+VIR+++ +GKLAA+ARGT ++EFLG
Sbjct: 95 DNLKDLYRFFASKFVTFVGVQIEEDLDLLRENHGLVIRNAINVGKLAAEARGTLVLEFLG 154
Query: 304 TRELAHKILWYDMSRLDSIQSKWDEAGGE 218
TRELAH++LW D+ +LDSI++KW++AG E
Sbjct: 155 TRELAHRVLWSDLGQLDSIEAKWEKAGPE 183
>gi|297810747|ref|XP_002873257.1| hypothetical protein ARALYDRAFT_487454
[Arabidopsis lyrata subsp. lyrata]
Length = 208
Score = 138 bits (345), Expect = 1e-030
Identities = 65/89 (73%), Positives = 80/89 (89%)
Frame = -3
Query: 484 DNLKDLYRFFASKFVTFVGVQIQEDLVLLKENHGIVIRSSLEIGKLAAKARGTPIVEFLG 305
DNLKDLYRFFASKFVTFVGVQI+EDL LL ENHG+VIR+++ IGKLA KARGT ++EFLG
Sbjct: 95 DNLKDLYRFFASKFVTFVGVQIEEDLNLLCENHGLVIRNAINIGKLAVKARGTLVLEFLG 154
Query: 304 TRELAHKILWYDMSRLDSIQSKWDEAGGE 218
TRELAH++LW D+ +LDSI++K ++AG E
Sbjct: 155 TRELAHRVLWSDLGQLDSIEAKGEKAGSE 183
>gi|255561991|ref|XP_002522004.1| glycogenin, putative [Ricinus communis]
Length = 776
Score = 63 bits (152), Expect = 3e-008
Identities = 32/64 (50%), Positives = 45/64 (70%)
Frame = -3
Query: 469 LYRFFASKFVTFVGVQIQEDLVLLKENHGIVIRSSLEIGKLAAKARGTPIVEFLGTRELA 290
L RFFA K + FVGV I+ED+ L+E++G+VIR+++E+ AAK + P F RELA
Sbjct: 113 LKRFFAIKDIVFVGVHIKEDVQKLREDYGVVIRNAVELSDWAAKVQDNPRFIFYSARELA 172
Query: 289 HKIL 278
+KIL
Sbjct: 173 NKIL 176
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,939,538,178,972
Number of Sequences: 15229318
Number of Extensions: 4939538178972
Number of Successful Extensions: 1157257337
Number of sequences better than 0.0: 0
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