BLASTX 7.6.2
Query= UN45041 /QuerySize=786
(785 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9BX40|LS14B_HUMAN Protein LSM14 homolog B OS=Homo sapiens GN... 111 1e-023
sp|Q8CGC4|LS14B_MOUSE Protein LSM14 homolog B OS=Mus musculus GN... 111 1e-023
sp|Q8ND56|LS14A_HUMAN Protein LSM14 homolog A OS=Homo sapiens GN... 109 2e-023
sp|Q5R4R4|LS14A_PONAB Protein LSM14 homolog A OS=Pongo abelii GN... 109 2e-023
sp|Q8AVJ2|L14AB_XENLA Protein LSM14 homolog A-B OS=Xenopus laevi... 109 3e-023
sp|Q3MHF8|LS14A_BOVIN Protein LSM14 homolog A OS=Bos taurus GN=L... 109 3e-023
sp|Q6NVR8|LS14A_XENTR Protein LSM14 homolog A OS=Xenopus tropica... 109 3e-023
sp|A0A8M2|L14AA_XENLA Protein LSM14 homolog A-A OS=Xenopus laevi... 109 4e-023
sp|Q498K9|L14BB_XENLA Protein LSM14 homolog B-B OS=Xenopus laevi... 109 4e-023
sp|Q8K2F8|LS14A_MOUSE Protein LSM14 homolog A OS=Mus musculus GN... 109 4e-023
sp|Q9HGL3|SUM2_SCHPO Protein sum2 OS=Schizosaccharomyces pombe G... 108 5e-023
sp|Q68FI1|L14BA_XENLA Protein LSM14 homolog B-A OS=Xenopus laevi... 107 1e-022
sp|Q566L7|LS14B_XENTR Protein LSM14 homolog B OS=Xenopus tropica... 107 1e-022
sp|Q9YH12|LSM14_PLEWA Protein LSM14 homolog OS=Pleurodeles waltl... 99 3e-020
sp|P45978|SCD6_YEAST Protein SCD6 OS=Saccharomyces cerevisiae GN... 67 1e-010
>sp|Q9BX40|LS14B_HUMAN Protein LSM14 homolog B OS=Homo sapiens GN=LSM14B PE=1
SV=1
Length = 385
Score = 111 bits (275), Expect = 1e-023
Identities = 59/102 (57%), Positives = 72/102 (70%), Gaps = 5/102 (4%)
Frame = +3
Query: 195 SSSSADSYVGSLISLTSKSEIRYEGILYNINTDESSIGLQNVRSFGTEGRKKDGPQVPPS 374
S SS Y+GS ISL SK++IRYEGILY I+TD S++ L VRSFGTE R D P PP
Sbjct: 2 SGSSGTPYLGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEDRPTDRP-APPR 60
Query: 375 DKVYEYILFRGTDIKDLQVKASPPAQPPAPPTLNNDPAIIQS 500
+++YEYI+FRG+DIKD+ V P AQ TL DPAI+QS
Sbjct: 61 EEIYEYIIFRGSDIKDITVCEPPKAQ----HTLPQDPAIVQS 98
>sp|Q8CGC4|LS14B_MOUSE Protein LSM14 homolog B OS=Mus musculus GN=Lsm14b PE=2
SV=2
Length = 385
Score = 111 bits (275), Expect = 1e-023
Identities = 59/102 (57%), Positives = 72/102 (70%), Gaps = 5/102 (4%)
Frame = +3
Query: 195 SSSSADSYVGSLISLTSKSEIRYEGILYNINTDESSIGLQNVRSFGTEGRKKDGPQVPPS 374
S SS Y+GS ISL SK++IRYEGILY I+TD S++ L VRSFGTE R D P PP
Sbjct: 2 SGSSGTPYLGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEDRPTDRP-APPR 60
Query: 375 DKVYEYILFRGTDIKDLQVKASPPAQPPAPPTLNNDPAIIQS 500
+++YEYI+FRG+DIKD+ V P AQ TL DPAI+QS
Sbjct: 61 EEIYEYIIFRGSDIKDITVCEPPKAQ----HTLPQDPAIVQS 98
>sp|Q8ND56|LS14A_HUMAN Protein LSM14 homolog A OS=Homo sapiens GN=LSM14A PE=1
SV=3
Length = 463
Score = 109 bits (272), Expect = 2e-023
Identities = 60/113 (53%), Positives = 76/113 (67%), Gaps = 7/113 (6%)
Frame = +3
Query: 201 SSADSYVGSLISLTSKSEIRYEGILYNINTDESSIGLQNVRSFGTEGRKKDGPQVPPSDK 380
S Y+GS ISL SK+EIRYEGILY I+T+ S++ L VRSFGTE R D P +PP D+
Sbjct: 2 SGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-IPPRDE 60
Query: 381 VYEYILFRGTDIKDLQVKASPPAQPPAPP-TLNNDPAIIQSHYPSPIPTSSSL 536
V+EYI+FRG+DIKDL V +PP P +L DPAI+QS S + S+
Sbjct: 61 VFEYIIFRGSDIKDLTV-----CEPPKPQCSLPQDPAIVQSSLGSSTSSFQSM 108
>sp|Q5R4R4|LS14A_PONAB Protein LSM14 homolog A OS=Pongo abelii GN=LSM14A PE=2
SV=1
Length = 463
Score = 109 bits (272), Expect = 2e-023
Identities = 60/113 (53%), Positives = 76/113 (67%), Gaps = 7/113 (6%)
Frame = +3
Query: 201 SSADSYVGSLISLTSKSEIRYEGILYNINTDESSIGLQNVRSFGTEGRKKDGPQVPPSDK 380
S Y+GS ISL SK+EIRYEGILY I+T+ S++ L VRSFGTE R D P +PP D+
Sbjct: 2 SGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-IPPRDE 60
Query: 381 VYEYILFRGTDIKDLQVKASPPAQPPAPP-TLNNDPAIIQSHYPSPIPTSSSL 536
V+EYI+FRG+DIKDL V +PP P +L DPAI+QS S + S+
Sbjct: 61 VFEYIIFRGSDIKDLTV-----CEPPKPQCSLPQDPAIVQSSLGSSTSSFQSM 108
>sp|Q8AVJ2|L14AB_XENLA Protein LSM14 homolog A-B OS=Xenopus laevis GN=lsm14a-b
PE=2 SV=1
Length = 471
Score = 109 bits (271), Expect = 3e-023
Identities = 60/110 (54%), Positives = 75/110 (68%), Gaps = 7/110 (6%)
Frame = +3
Query: 201 SSADSYVGSLISLTSKSEIRYEGILYNINTDESSIGLQNVRSFGTEGRKKDGPQVPPSDK 380
S Y+GS ISL SK+EIRYEGILY I+T+ S++ L VRSFGTE R D P +PP D+
Sbjct: 2 SGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-IPPRDE 60
Query: 381 VYEYILFRGTDIKDLQVKASPPAQPPAPP-TLNNDPAIIQSHYPSPIPTS 527
V+EYI+FRG+DIKDL V +PP P +L DPAI+QS S +S
Sbjct: 61 VFEYIIFRGSDIKDLTV-----CEPPKPQCSLPQDPAIVQSSLGSSSASS 105
>sp|Q3MHF8|LS14A_BOVIN Protein LSM14 homolog A OS=Bos taurus GN=LSM14A PE=2
SV=1
Length = 463
Score = 109 bits (271), Expect = 3e-023
Identities = 60/113 (53%), Positives = 76/113 (67%), Gaps = 7/113 (6%)
Frame = +3
Query: 201 SSADSYVGSLISLTSKSEIRYEGILYNINTDESSIGLQNVRSFGTEGRKKDGPQVPPSDK 380
S Y+GS ISL SK+EIRYEGILY I+T+ S++ L VRSFGTE R D P +PP D+
Sbjct: 2 SGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-IPPRDE 60
Query: 381 VYEYILFRGTDIKDLQVKASPPAQPPAPP-TLNNDPAIIQSHYPSPIPTSSSL 536
V+EYI+FRG+DIKDL V +PP P +L DPAI+QS S + S+
Sbjct: 61 VFEYIIFRGSDIKDLTV-----CEPPKPQCSLPQDPAIVQSSLGSSTSSFQSV 108
>sp|Q6NVR8|LS14A_XENTR Protein LSM14 homolog A OS=Xenopus tropicalis GN=lsm14a
PE=2 SV=1
Length = 469
Score = 109 bits (271), Expect = 3e-023
Identities = 60/110 (54%), Positives = 75/110 (68%), Gaps = 7/110 (6%)
Frame = +3
Query: 201 SSADSYVGSLISLTSKSEIRYEGILYNINTDESSIGLQNVRSFGTEGRKKDGPQVPPSDK 380
S Y+GS ISL SK+EIRYEGILY I+T+ S++ L VRSFGTE R D P +PP D+
Sbjct: 2 SGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-IPPRDE 60
Query: 381 VYEYILFRGTDIKDLQVKASPPAQPPAPP-TLNNDPAIIQSHYPSPIPTS 527
V+EYI+FRG+DIKDL V +PP P +L DPAI+QS S +S
Sbjct: 61 VFEYIIFRGSDIKDLTV-----CEPPKPQCSLPQDPAIVQSSLGSSSASS 105
>sp|A0A8M2|L14AA_XENLA Protein LSM14 homolog A-A OS=Xenopus laevis GN=lsm14a-a
PE=1 SV=1
Length = 471
Score = 109 bits (270), Expect = 4e-023
Identities = 59/110 (53%), Positives = 75/110 (68%), Gaps = 7/110 (6%)
Frame = +3
Query: 201 SSADSYVGSLISLTSKSEIRYEGILYNINTDESSIGLQNVRSFGTEGRKKDGPQVPPSDK 380
S Y+GS ISL SK+EIRYEGILY I+T+ S++ L VRSFGTE R D P +PP D+
Sbjct: 2 SGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-IPPRDE 60
Query: 381 VYEYILFRGTDIKDLQVKASPPAQPPAPP-TLNNDPAIIQSHYPSPIPTS 527
++EYI+FRG+DIKDL V +PP P +L DPAI+QS S +S
Sbjct: 61 IFEYIIFRGSDIKDLTV-----CEPPKPQCSLPQDPAIVQSSLGSSSASS 105
>sp|Q498K9|L14BB_XENLA Protein LSM14 homolog B-B OS=Xenopus laevis GN=lsm14b-b
PE=1 SV=1
Length = 380
Score = 109 bits (270), Expect = 4e-023
Identities = 60/114 (52%), Positives = 76/114 (66%), Gaps = 7/114 (6%)
Frame = +3
Query: 201 SSADSYVGSLISLTSKSEIRYEGILYNINTDESSIGLQNVRSFGTEGRKKDGPQVPPSDK 380
SS Y+GS ISL SK++IRYEGILY I+T+ S++ L VRSFGTE R D P PP ++
Sbjct: 2 SSGTPYIGSKISLISKAQIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-APPREE 60
Query: 381 VYEYILFRGTDIKDLQVKASPPAQPP-APPTLNNDPAIIQSHYPSPIPTSSSLP 539
VYEYI+FRG+DIKD+ V +PP A L+ DPAI+QS S S+P
Sbjct: 61 VYEYIIFRGSDIKDITV-----CEPPKASHALSQDPAIVQSSLGSAASYQPSVP 109
>sp|Q8K2F8|LS14A_MOUSE Protein LSM14 homolog A OS=Mus musculus GN=Lsm14a PE=1
SV=1
Length = 462
Score = 109 bits (270), Expect = 4e-023
Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 7/101 (6%)
Frame = +3
Query: 201 SSADSYVGSLISLTSKSEIRYEGILYNINTDESSIGLQNVRSFGTEGRKKDGPQVPPSDK 380
S Y+GS ISL SK+EIRYEGILY I+T+ S++ L VRSFGTE R D P +PP D+
Sbjct: 2 SGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-IPPRDE 60
Query: 381 VYEYILFRGTDIKDLQVKASPPAQPPAPP-TLNNDPAIIQS 500
V+EYI+FRG+DIKDL V +PP P +L DPAI+QS
Sbjct: 61 VFEYIIFRGSDIKDLTV-----CEPPKPQCSLPQDPAIVQS 96
>sp|Q9HGL3|SUM2_SCHPO Protein sum2 OS=Schizosaccharomyces pombe GN=sum2 PE=2
SV=1
Length = 426
Score = 108 bits (269), Expect = 5e-023
Identities = 68/168 (40%), Positives = 96/168 (57%), Gaps = 12/168 (7%)
Frame = +3
Query: 216 YVGSLISLTSKSEIRYEGILYNINTDESSIGLQNVRSFGTEGRKKDGPQ-VPPSDKVYEY 392
++GS ISL SKS+IRY GIL +IN+ +S++ L++VR GTEGRK+D Q +PPSD V++Y
Sbjct: 4 FIGSRISLISKSDIRYVGILQDINSQDSTLALKHVRWCGTEGRKQDPSQEIPPSDNVFDY 63
Query: 393 ILFRGTDIKDLQVK--ASPPAQPPAPPTLNNDPAIIQSHYP----SPIPTSSSLPPTVSN 554
I+FRG+D+KDL+++ A+ P+ PP P NDPAII S+ + T+ P N
Sbjct: 64 IVFRGSDVKDLRIEEPATTPSAPPVQPP--NDPAIIGSNSGQYNWNQAQTAQPPQPVQPN 121
Query: 555 SLSDTSSHIGQPGQPGMGFQNSMPLYQPGGNL---APWGASPQQPPMY 689
G P + N+ + P G L P AS P Y
Sbjct: 122 PYGAPYQQAPPAGAPYYMYPNAPAQFVPPGGLPLGTPLDASTPAVPYY 169
>sp|Q68FI1|L14BA_XENLA Protein LSM14 homolog B-A OS=Xenopus laevis GN=lsm14b-a
PE=1 SV=1
Length = 422
Score = 107 bits (265), Expect = 1e-022
Identities = 60/113 (53%), Positives = 74/113 (65%), Gaps = 6/113 (5%)
Frame = +3
Query: 201 SSADSYVGSLISLTSKSEIRYEGILYNINTDESSIGLQNVRSFGTEGRKKDGPQVPPSDK 380
SS Y+GS ISL SK++IRYEGILY I+T+ S++ L VRSFGTE R D P PP ++
Sbjct: 2 SSGTPYIGSKISLISKAQIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-APPREE 60
Query: 381 VYEYILFRGTDIKDLQVKASPPAQPPAPPTLNNDPAIIQSHYPSPIPTSSSLP 539
VYEYI+FRG+DIKD+ V P A P DPAI+QS S P +S P
Sbjct: 61 VYEYIIFRGSDIKDITVCEPPKASHALP----QDPAIVQSSLGS-APAASYQP 108
>sp|Q566L7|LS14B_XENTR Protein LSM14 homolog B OS=Xenopus tropicalis GN=lsm14b
PE=2 SV=1
Length = 382
Score = 107 bits (265), Expect = 1e-022
Identities = 61/115 (53%), Positives = 75/115 (65%), Gaps = 7/115 (6%)
Frame = +3
Query: 201 SSADSYVGSLISLTSKSEIRYEGILYNINTDESSIGLQNVRSFGTEGRKKDGPQVPPSDK 380
SS Y+GS ISL SK++IRYEGILY I+T+ S++ L VRSFGTE R D P PP ++
Sbjct: 2 SSGTPYIGSKISLISKAQIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-APPREE 60
Query: 381 VYEYILFRGTDIKDLQVKASPPAQPPAPPTLNNDPAIIQSHYPSPIPTS--SSLP 539
VYEYI+FRG+DIKD+ V P A P DPAI+QS S S SS+P
Sbjct: 61 VYEYIIFRGSDIKDITVCEPPKASHALP----QDPAIVQSSLGSAPSASYQSSVP 111
>sp|Q9YH12|LSM14_PLEWA Protein LSM14 homolog OS=Pleurodeles waltlii GN=lsm14
PE=1 SV=1
Length = 467
Score = 99 bits (245), Expect = 3e-020
Identities = 60/130 (46%), Positives = 76/130 (58%), Gaps = 7/130 (5%)
Frame = +3
Query: 201 SSADSYVGSLISLTSKSEIRYEGILYNINTDESSIGLQNVRSFGTEGRKKDGPQVPPSDK 380
S Y+GS ISL SK+EIRYEGILY I+T+ S++ L GTE R D P +PP D+
Sbjct: 2 SGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVVLAKFALLGTEDRPTDRP-IPPRDE 60
Query: 381 VYEYILFRGTDIKDLQVKASPPAQPPAPP-TLNNDPAIIQSHYPSPIPTSSSLPPTVSNS 557
V+EYI+FRG+DIKDL V +PP P +L DPAI+QS S + S+ S
Sbjct: 61 VFEYIIFRGSDIKDLTV-----CEPPKPQCSLPQDPAIVQSSLGSSSTSFQSVSSYGPFS 115
Query: 558 LSDTSSHIGQ 587
T S Q
Sbjct: 116 RMPTYSQFNQ 125
>sp|P45978|SCD6_YEAST Protein SCD6 OS=Saccharomyces cerevisiae GN=SCD6 PE=1
SV=1
Length = 349
Score = 67 bits (162), Expect = 1e-010
Identities = 31/73 (42%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 216 YVGSLISLTSKSEIRYEGILYNINTDESSIGLQNVRSFGTEGRKKDGP-QVPPSDKVYEY 392
Y+G ISL S ++ RY G+L +I++++ ++ L+ VR FGTEGRK GP ++ P+ VY
Sbjct: 4 YIGKTISLISVTDNRYVGLLEDIDSEKGTVTLKEVRCFGTEGRKNWGPEEIYPNPTVYNS 63
Query: 393 ILFRGTDIKDLQV 431
+ F G+++KDL +
Sbjct: 64 VKFNGSEVKDLSI 76
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171,432,990,471
Number of Sequences: 518415
Number of Extensions: 171432990471
Number of Successful Extensions: 1050360658
Number of sequences better than 0.0: 0
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