Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN45068


BLASTX 7.6.2

Query= UN45068 /QuerySize=574
        (573 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|42571141|ref|NP_973644.1| uncharacterized protein [Arabidopsi...     87   1e-015
gi|297827625|ref|XP_002881695.1| hypothetical protein ARALYDRAFT...     86   3e-015
gi|297789204|ref|XP_002862592.1| predicted protein [Arabidopsis ...     66   2e-009

>gi|42571141|ref|NP_973644.1| uncharacterized protein [Arabidopsis thaliana]

          Length = 93

 Score =  87 bits (214), Expect = 1e-015
 Identities = 48/72 (66%), Positives = 52/72 (72%), Gaps = 5/72 (6%)
 Frame = -3

Query: 400 PPLYNEAPPPVVAGVAQPAEFHLIQRIQRALVELRDLRNQFNAILREMELEVVGGGGGGE 221
           P      P  + A  A PAE HLIQRIQRALVELR+LRNQFNAILRE+E EV     G E
Sbjct:  23 PSASQRRPVVIAADAAPPAENHLIQRIQRALVELRELRNQFNAILRELEFEV-----GEE 77

Query: 220 EEEAESSVEDPE 185
           EE+AESSVEDPE
Sbjct:  78 EEQAESSVEDPE 89

>gi|297827625|ref|XP_002881695.1| hypothetical protein ARALYDRAFT_483047
        [Arabidopsis lyrata subsp. lyrata]

          Length = 93

 Score =  86 bits (210), Expect = 3e-015
 Identities = 47/72 (65%), Positives = 52/72 (72%), Gaps = 5/72 (6%)
 Frame = -3

Query: 400 PPLYNEAPPPVVAGVAQPAEFHLIQRIQRALVELRDLRNQFNAILREMELEVVGGGGGGE 221
           P      P  + A  A P E HLIQRIQRALVELR+LRNQFNAILRE+E+EV     G E
Sbjct:  23 PSASRRRPVMIAADAAPPEENHLIQRIQRALVELRELRNQFNAILRELEVEV-----GEE 77

Query: 220 EEEAESSVEDPE 185
           EE+AESSVEDPE
Sbjct:  78 EEQAESSVEDPE 89

>gi|297789204|ref|XP_002862592.1| predicted protein [Arabidopsis lyrata subsp.
        lyrata]

          Length = 85

 Score =  66 bits (160), Expect = 2e-009
 Identities = 34/51 (66%), Positives = 37/51 (72%)
 Frame = -3

Query: 400 PPLYNEAPPPVVAGVAQPAEFHLIQRIQRALVELRDLRNQFNAILREMELE 248
           P      P  + A  A P E HLIQRIQRALVELR+LRNQFNAILRE+ELE
Sbjct:  23 PSASRRRPVMIAADAAPPEENHLIQRIQRALVELRELRNQFNAILRELELE 73

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,939,538,178,972
Number of Sequences: 15229318
Number of Extensions: 4939538178972
Number of Successful Extensions: 1157257337
Number of sequences better than 0.0: 0