BLASTX 7.6.2
Query= UN45399 /QuerySize=1219
(1218 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G62800.1 | Symbols: DRB4 | DRB4 (DOUBLE-STRAND... 322 4e-088
TAIR9_protein||AT3G62800.2 | Symbols: DRB4 | DRB4 (DOUBLE-STRAND... 322 4e-088
TAIR9_protein||AT3G62800.3 | Symbols: | DRB4 (DOUBLE-STRANDED-R... 319 3e-087
TAIR9_protein||AT3G26932.1 | Symbols: DRB3 | DRB3 (dsRNA-binding... 136 5e-032
TAIR9_protein||AT3G26932.2 | Symbols: DRB3 | DRB3 (dsRNA-binding... 136 5e-032
TAIR9_protein||AT2G28380.1 | Symbols: DRB2 | DRB2 (DSRNA-BINDING... 132 4e-031
TAIR9_protein||AT5G41070.1 | Symbols: DRB5 | DRB5 (DSRNA-BINDING... 125 8e-029
>TAIR9_protein||AT3G62800.1 | Symbols: DRB4 | DRB4 (DOUBLE-STRANDED-RNA-BINDING
PROTEIN 4); double-stranded RNA binding / protein binding |
chr3:23225749-23227163 REVERSE
Length = 356
Score = 322 bits (824), Expect = 4e-088
Identities = 171/256 (66%), Positives = 202/256 (78%), Gaps = 5/256 (1%)
Frame = +1
Query: 79 MDHMYKSQLQSYAMKQNMELPVYAAERQGPAHAPRFRCKVTVFGQTFQSLEFCPTLKAAE 258
MDH+YK QLQ+YA++ N+ELPVYA ER+GP HAPRFRC VT GQTFQS EF PTLK+AE
Sbjct: 1 MDHVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAE 60
Query: 259 HAAAKVALASLTPLNPEGVVDLAYKNLLQEIAQKENSLLPVYATSTSGPSHSPTFTSTVE 438
HAAAK+A+ASLTP +PEG +D+AYKNLLQEIAQKE+SLLP YAT+TSGPSH+PTFTSTVE
Sbjct: 61 HAAAKIAVASLTPQSPEG-IDVAYKNLLQEIAQKESSLLPFYATATSGPSHAPTFTSTVE 119
Query: 439 FAGNVYKGEEAKTKKLAEMNAAKVAFMCIKYGEPNQTPSPSLPCEKQEAANSNVKSSEQV 618
FAG V+ GEEAKTKKLAEM+AAKVAFM IK G NQT SP+LP E+QE NSNVKSS Q
Sbjct: 120 FAGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTLPSERQEDVNSNVKSSPQE 179
Query: 619 SPSLPSKMV--TPDVPSKWIEVYEDELADVLNAPADSVKNTNIAASPMATHPTNDATLTV 792
S PS V TPD PSK I+V EDE D+ +APA + K N+A + +PTND TL+
Sbjct: 180 IHSQPSSKVVMTPDTPSKGIKVNEDEFPDLHDAPASNAKEINVALNE-PENPTNDGTLS- 237
Query: 793 APATKVMEMNVDATDL 840
A T M+MN+ ++ L
Sbjct: 238 ALTTDGMKMNIASSSL 253
Score = 92 bits (226), Expect = 8e-019
Identities = 45/85 (52%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Frame = +1
Query: 772 NDATLTVAPATKVMEMNVDATDLSKKSTNNANESCEKKLVMGSGYQSIPGGQHVVCRPWN 951
N +A + M N D S+ S+ +ES +KKL+MG+G+ SIP GQHVVCRPWN
Sbjct: 271 NGIKRNIAACSSWMPQN-PTNDGSETSSCVVDESEKKKLIMGTGHLSIPTGQHVVCRPWN 329
Query: 952 QDMTLPEDAEMLFRDDRFISYRVLK 1026
++TLP+DAEMLFRDD+FI+YR++K
Sbjct: 330 PEITLPQDAEMLFRDDKFIAYRLVK 354
>TAIR9_protein||AT3G62800.2 | Symbols: DRB4 | DRB4 (DOUBLE-STRANDED-RNA-BINDING
PROTEIN 4); double-stranded RNA binding / protein binding |
chr3:23225749-23227163 REVERSE
Length = 356
Score = 322 bits (824), Expect = 4e-088
Identities = 171/256 (66%), Positives = 202/256 (78%), Gaps = 5/256 (1%)
Frame = +1
Query: 79 MDHMYKSQLQSYAMKQNMELPVYAAERQGPAHAPRFRCKVTVFGQTFQSLEFCPTLKAAE 258
MDH+YK QLQ+YA++ N+ELPVYA ER+GP HAPRFRC VT GQTFQS EF PTLK+AE
Sbjct: 1 MDHVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAE 60
Query: 259 HAAAKVALASLTPLNPEGVVDLAYKNLLQEIAQKENSLLPVYATSTSGPSHSPTFTSTVE 438
HAAAK+A+ASLTP +PEG +D+AYKNLLQEIAQKE+SLLP YAT+TSGPSH+PTFTSTVE
Sbjct: 61 HAAAKIAVASLTPQSPEG-IDVAYKNLLQEIAQKESSLLPFYATATSGPSHAPTFTSTVE 119
Query: 439 FAGNVYKGEEAKTKKLAEMNAAKVAFMCIKYGEPNQTPSPSLPCEKQEAANSNVKSSEQV 618
FAG V+ GEEAKTKKLAEM+AAKVAFM IK G NQT SP+LP E+QE NSNVKSS Q
Sbjct: 120 FAGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTLPSERQEDVNSNVKSSPQE 179
Query: 619 SPSLPSKMV--TPDVPSKWIEVYEDELADVLNAPADSVKNTNIAASPMATHPTNDATLTV 792
S PS V TPD PSK I+V EDE D+ +APA + K N+A + +PTND TL+
Sbjct: 180 IHSQPSSKVVMTPDTPSKGIKVNEDEFPDLHDAPASNAKEINVALNE-PENPTNDGTLS- 237
Query: 793 APATKVMEMNVDATDL 840
A T M+MN+ ++ L
Sbjct: 238 ALTTDGMKMNIASSSL 253
Score = 92 bits (226), Expect = 8e-019
Identities = 45/85 (52%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Frame = +1
Query: 772 NDATLTVAPATKVMEMNVDATDLSKKSTNNANESCEKKLVMGSGYQSIPGGQHVVCRPWN 951
N +A + M N D S+ S+ +ES +KKL+MG+G+ SIP GQHVVCRPWN
Sbjct: 271 NGIKRNIAACSSWMPQN-PTNDGSETSSCVVDESEKKKLIMGTGHLSIPTGQHVVCRPWN 329
Query: 952 QDMTLPEDAEMLFRDDRFISYRVLK 1026
++TLP+DAEMLFRDD+FI+YR++K
Sbjct: 330 PEITLPQDAEMLFRDDKFIAYRLVK 354
>TAIR9_protein||AT3G62800.3 | Symbols: | DRB4 (DOUBLE-STRANDED-RNA-BINDING
PROTEIN 4); double-stranded RNA binding / protein binding |
chr3:23225749-23227163 REVERSE
Length = 330
Score = 319 bits (816), Expect = 3e-087
Identities = 178/319 (55%), Positives = 221/319 (69%), Gaps = 8/319 (2%)
Frame = +1
Query: 79 MDHMYKSQLQSYAMKQNMELPVYAAERQGPAHAPRFRCKVTVFGQTFQSLEFCPTLKAAE 258
MDH+YK QLQ+YA++ N+ELPVYA ER+GP HAPRFRC VT GQTFQS EF PTLK+AE
Sbjct: 1 MDHVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAE 60
Query: 259 HAAAKVALASLTPLNPEGVVDLAYKNLLQEIAQKENSLLPVYATSTSGPSHSPTFTSTVE 438
HAAAK+A+ASLTP +PEG +D+AYKNLLQEIAQKE+SLLP YAT+TSGPSH+PTFTSTVE
Sbjct: 61 HAAAKIAVASLTPQSPEG-IDVAYKNLLQEIAQKESSLLPFYATATSGPSHAPTFTSTVE 119
Query: 439 FAGNVYKGEEAKTKKLAEMNAAKVAFMCIKYGEPNQTPSPSLPCEKQEAANSNVKSSEQV 618
FAG V+ GEEAKTKKLAEM+AAKVAFM IK G NQT SP+LP E+QE NSNVKSS Q
Sbjct: 120 FAGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTLPSERQEDVNSNVKSSPQE 179
Query: 619 SPSLPSKMV--TPDVPSKWIEVYEDELADVLNAPADSVKNTNIAASPMATHPTNDATLT- 789
S PS V TPD PSK I+V EDE D+ +APA + K N+A + +PTND TL+
Sbjct: 180 IHSQPSSKVVMTPDTPSKGIKVNEDEFPDLHDAPASNAKEINVALNE-PENPTNDGTLSA 238
Query: 790 -VAPATKVMEMNVDATD--LSKKSTNNANESCEKKLVMGSGYQSIPGGQHVVCRPWNQDM 960
A ++ N+ A + + TN+ +E+ + + I G H+ +
Sbjct: 239 LTTDAANGIKRNIAACSSWMPQNPTNDGSETSSCVVDESEKKKLIMGTGHLSIPTGQHVV 298
Query: 961 TLPEDAEMLFRDDRFISYR 1017
P + E+ D + +R
Sbjct: 299 CRPWNPEITLPQDAEMLFR 317
Score = 97 bits (241), Expect = 1e-020
Identities = 51/113 (45%), Positives = 73/113 (64%), Gaps = 3/113 (2%)
Frame = +1
Query: 688 ELADVLNAPADSVKNTNIAASPMATHPTNDATLTVAPATKVMEMNVDATDLSKKSTNNAN 867
E+ LN P + + ++A + T N +A + M N D S+ S+ +
Sbjct: 219 EINVALNEPENPTNDGTLSA--LTTDAANGIKRNIAACSSWMPQN-PTNDGSETSSCVVD 275
Query: 868 ESCEKKLVMGSGYQSIPGGQHVVCRPWNQDMTLPEDAEMLFRDDRFISYRVLK 1026
ES +KKL+MG+G+ SIP GQHVVCRPWN ++TLP+DAEMLFRDD+FI+YR++K
Sbjct: 276 ESEKKKLIMGTGHLSIPTGQHVVCRPWNPEITLPQDAEMLFRDDKFIAYRLVK 328
>TAIR9_protein||AT3G26932.1 | Symbols: DRB3 | DRB3 (dsRNA-binding protein 3);
RNA binding / double-stranded RNA binding | chr3:9930460-9931714
REVERSE
Length = 360
Score = 136 bits (340), Expect = 5e-032
Identities = 74/154 (48%), Positives = 95/154 (61%), Gaps = 7/154 (4%)
Frame = +1
Query: 88 MYKSQLQSYAMKQNMELPVYAAERQGPAHAPRFRCKVTVFGQTFQSLEFCPTLKAAEHAA 267
MYK+QLQ A + LP Y R+GP HAPRF+ V G+ F+S +C TL+ AEH+A
Sbjct: 1 MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60
Query: 268 AKVALASLTPLNPE-----GVVDLA--YKNLLQEIAQKENSLLPVYATSTSGPSHSPTFT 426
A+VAL++L+ P V+D YKNLLQE A + LPVY + SGP H PTF+
Sbjct: 61 AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120
Query: 427 STVEFAGNVYKGEEAKTKKLAEMNAAKVAFMCIK 528
TVE AG + GE AKTKK AE NAA A+ ++
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLR 154
>TAIR9_protein||AT3G26932.2 | Symbols: DRB3 | DRB3 (dsRNA-binding protein 3);
RNA binding / double-stranded RNA binding | chr3:9930460-9931714
REVERSE
Length = 360
Score = 136 bits (340), Expect = 5e-032
Identities = 74/154 (48%), Positives = 95/154 (61%), Gaps = 7/154 (4%)
Frame = +1
Query: 88 MYKSQLQSYAMKQNMELPVYAAERQGPAHAPRFRCKVTVFGQTFQSLEFCPTLKAAEHAA 267
MYK+QLQ A + LP Y R+GP HAPRF+ V G+ F+S +C TL+ AEH+A
Sbjct: 1 MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60
Query: 268 AKVALASLTPLNPE-----GVVDLA--YKNLLQEIAQKENSLLPVYATSTSGPSHSPTFT 426
A+VAL++L+ P V+D YKNLLQE A + LPVY + SGP H PTF+
Sbjct: 61 AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120
Query: 427 STVEFAGNVYKGEEAKTKKLAEMNAAKVAFMCIK 528
TVE AG + GE AKTKK AE NAA A+ ++
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLR 154
>TAIR9_protein||AT2G28380.1 | Symbols: DRB2 | DRB2 (DSRNA-BINDING PROTEIN 2);
double-stranded RNA binding | chr2:12134098-12135915 REVERSE
Length = 435
Score = 132 bits (332), Expect = 4e-031
Identities = 72/154 (46%), Positives = 92/154 (59%), Gaps = 7/154 (4%)
Frame = +1
Query: 88 MYKSQLQSYAMKQNMELPVYAAERQGPAHAPRFRCKVTVFGQTFQSLEFCPTLKAAEHAA 267
MYK+QLQ A + LP Y R+GP HAPRF+ V G+ F+S ++C TL+ AEH+A
Sbjct: 1 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60
Query: 268 AKVALASLTPLNPEGVVDL-------AYKNLLQEIAQKENSLLPVYATSTSGPSHSPTFT 426
A+VAL +L+ P + YKNLLQEIAQ+ + LP Y T SG H P FT
Sbjct: 61 AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120
Query: 427 STVEFAGNVYKGEEAKTKKLAEMNAAKVAFMCIK 528
TVE AG + G+ AK KK AE NAA A+ +K
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLK 154
>TAIR9_protein||AT5G41070.1 | Symbols: DRB5 | DRB5 (DSRNA-BINDING PROTEIN 5);
double-stranded RNA binding | chr5:16438547-16439916 FORWARD
Length = 394
Score = 125 bits (312), Expect = 8e-029
Identities = 70/154 (45%), Positives = 89/154 (57%), Gaps = 7/154 (4%)
Frame = +1
Query: 88 MYKSQLQSYAMKQNMELPVYAAERQGPAHAPRFRCKVTVFGQTFQSLEFCPTLKAAEHAA 267
MYK+QLQ A + LP Y R+GP HAPRF+ V G+ F+S +C TL+ AEHAA
Sbjct: 1 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60
Query: 268 AKVALASLTPLNPEGVVDL-------AYKNLLQEIAQKENSLLPVYATSTSGPSHSPTFT 426
A+V+L L+ P + YKNLLQE A + LP+Y + SG H P F+
Sbjct: 61 AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120
Query: 427 STVEFAGNVYKGEEAKTKKLAEMNAAKVAFMCIK 528
TVE AG + GE AKTKK AE NAA A+ +K
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLK 154
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,947,791,062
Number of Sequences: 33410
Number of Extensions: 21947791062
Number of Successful Extensions: 696830150
Number of sequences better than 0.0: 0
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