BLASTX 7.6.2
Query= UN45416 /QuerySize=1128
(1127 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G51120.1 | Symbols: PABN1, ATPABN1 | PABN1 (PO... 404 6e-113
TAIR9_protein||AT5G65260.1 | Symbols: | polyadenylate-binding p... 262 3e-070
TAIR9_protein||AT5G10350.1 | Symbols: | polyadenylate-binding p... 254 1e-067
TAIR9_protein||AT5G10350.2 | Symbols: | polyadenylate-binding p... 230 2e-060
TAIR9_protein||AT2G16940.1 | Symbols: | RNA recognition motif (... 57 3e-008
TAIR9_protein||AT2G35410.1 | Symbols: | 33 kDa ribonucleoprotei... 53 3e-007
TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine... 49 5e-006
>TAIR9_protein||AT5G51120.1 | Symbols: PABN1, ATPABN1 | PABN1
(POLYADENYLATE-BINDING PROTEIN 1); RNA binding / poly(A) binding /
protein binding | chr5:20779760-20781241 FORWARD
Length = 228
Score = 404 bits (1037), Expect = 6e-113
Identities = 201/233 (86%), Positives = 213/233 (91%), Gaps = 6/233 (2%)
Frame = +3
Query: 189 MALQDEQEHEVYGGDIPEEDEGEMETDEYLEHAGEEEEGAAAAAEDEEELEPGSASRDLE 368
M + DEQEHEVYGG+IPEE+EGEM+T+EY EH G EEGAAA +EELEPGS+SRDLE
Sbjct: 1 MPVHDEQEHEVYGGEIPEEEEGEMDTEEYEEHGG--EEGAAAG---DEELEPGSSSRDLE 55
Query: 369 EMKKRIKEIEEEASALREMQAKAENDMAAAQDPSSAISAAEKEEVDLRSIYVGNVDYACT 548
+MKKRIKEIEEEA ALREMQAKAE DM A+QDPS +SAAEKEEVD RSIYVGNVDYACT
Sbjct: 56 DMKKRIKEIEEEAGALREMQAKAEKDMGASQDPSGGVSAAEKEEVDSRSIYVGNVDYACT 115
Query: 549 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEEEAVQNSLVLNETELHGRQIKVS 728
PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE EAVQNSL+LNE+ELHGRQIKVS
Sbjct: 116 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVS 175
Query: 729 AKRTNVPGMRQFRGR-RPFRPMRGFMPGPPFYPPYAYGRVPRFRRPMRYRPY* 884
AKRTNVPGMRQFRGR RPFRPMRGFMPG PFYPPYAYGRVPRFRRPMRYRPY*
Sbjct: 176 AKRTNVPGMRQFRGRGRPFRPMRGFMPGVPFYPPYAYGRVPRFRRPMRYRPY* 228
>TAIR9_protein||AT5G65260.1 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:26080501-26082984 REVERSE
Length = 221
Score = 262 bits (669), Expect = 3e-070
Identities = 141/224 (62%), Positives = 168/224 (75%), Gaps = 19/224 (8%)
Frame = +3
Query: 225 GGDIPEEDEGEMETDEYLEHAGEEEEGAAAAAEDEEELEPGSASRDLEEMKKRIKEIEEE 404
GG+IP D GEM+ D +E + + AAA+D+ A ++L+EMKKR+KE+E+E
Sbjct: 10 GGEIP--DVGEMDGD--MEALNPDLD--MAAADDD-------AVKELDEMKKRLKEMEDE 56
Query: 405 ASALREMQAKAENDMAAAQDPSSAISAAEKEEVDLRSIYVGNVDYACTPEEVQQHFQSCG 584
A+ALREMQAK E +M A S A + A KEEVD RS++VGNVDYACTPEEVQQHFQ+CG
Sbjct: 57 AAALREMQAKVEKEMGAQDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCG 116
Query: 585 TVNRVTILTDKFGQPKGFAYVEFVEEEAVQNSLVLNETELHGRQIKVSAKRTNVPGMRQF 764
TV+RVTILTDKFGQPKGFAYVEFVE EAVQ +L LNE+ELHGRQ+KV KRTNVPG++QF
Sbjct: 117 TVHRVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQF 176
Query: 765 RGRRPFRPMRGFMPGPPF-----YPPYAYGRVPRFRRPMRYRPY 881
RGRR F P G+ PF Y PY YG+ PRFRRPMRY PY
Sbjct: 177 RGRR-FNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRRPMRYMPY 219
>TAIR9_protein||AT5G10350.1 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:3255674-3257746 REVERSE
Length = 218
Score = 254 bits (647), Expect = 1e-067
Identities = 136/218 (62%), Positives = 160/218 (73%), Gaps = 12/218 (5%)
Frame = +3
Query: 258 METDEYLEHAGEEEEGAAAAAEDEEELEPGSASRD----LEEMKKRIKEIEEEASALREM 425
ME +E+ + GE E D +++ +A D L EMK+R+KE+EEEA+ALREM
Sbjct: 1 MEEEEHEVYGGEIPEVGDTDVPD-PDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREM 59
Query: 426 QAKAENDMAAAQDPSSAISAAE-KEEVDLRSIYVGNVDYACTPEEVQQHFQSCGTVNRVT 602
QAK E +M A QDP+S + E KEEVD RS+YVGNVDYACTPEEVQ HFQ+CGTVNRVT
Sbjct: 60 QAKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVT 119
Query: 603 ILTDKFGQPKGFAYVEFVEEEAVQNSLVLNETELHGRQIKVSAKRTNVPGMRQFRGRR-- 776
IL DKFGQPKGFAYVEFVE EAVQ +L LNE+ELHGRQ+KVS KRTNVPGM+Q+ R
Sbjct: 120 ILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFN 179
Query: 777 ---PFRPMRGFMPGPPFYPPYAYGRVPRFRRPMRYRPY 881
+R R F+P P FY PY YG+ PRFRRPMRY PY
Sbjct: 180 PSMGYRFRRPFVP-PYFYSPYGYGKAPRFRRPMRYMPY 216
>TAIR9_protein||AT5G10350.2 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:3255808-3257746 REVERSE
Length = 203
Score = 230 bits (584), Expect = 2e-060
Identities = 123/198 (62%), Positives = 145/198 (73%), Gaps = 7/198 (3%)
Frame = +3
Query: 258 METDEYLEHAGEEEEGAAAAAEDEEELEPGSASRD----LEEMKKRIKEIEEEASALREM 425
ME +E+ + GE E D +++ +A D L EMK+R+KE+EEEA+ALREM
Sbjct: 1 MEEEEHEVYGGEIPEVGDTDVPD-PDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREM 59
Query: 426 QAKAENDMAAAQDPSSAISAAE-KEEVDLRSIYVGNVDYACTPEEVQQHFQSCGTVNRVT 602
QAK E +M A QDP+S + E KEEVD RS+YVGNVDYACTPEEVQ HFQ+CGTVNRVT
Sbjct: 60 QAKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVT 119
Query: 603 ILTDKFGQPKGFAYVEFVEEEAVQNSLVLNETELHGRQIKVSAKRTNVPGMRQFRGRRPF 782
IL DKFGQPKGFAYVEFVE EAVQ +L LNE+ELHGRQ+KVS KRTNVPGM+Q+ R F
Sbjct: 120 ILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGR-F 178
Query: 783 RPMRGFMPGPPFYPPYAY 836
P G+ PF PPY Y
Sbjct: 179 NPSMGYRFRRPFVPPYFY 196
>TAIR9_protein||AT2G16940.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr2:7342869-7347052 REVERSE
Length = 562
Score = 57 bits (135), Expect = 3e-008
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +3
Query: 510 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEEEAVQNSLVL 689
R +YVGN+ + +++++ F+S G+V V + D+ G KGF +V+F E +N+L L
Sbjct: 285 RRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALNL 344
Query: 690 N-ETELHGRQIKVSA--KRTNVP 749
N + E+ GR IKVSA +T VP
Sbjct: 345 NGQLEIAGRAIKVSAVTDQTEVP 367
>TAIR9_protein||AT2G35410.1 | Symbols: | 33 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp33, putative | chr2:14898341-14899590
FORWARD
Length = 309
Score = 53 bits (126), Expect = 3e-007
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = +3
Query: 435 AENDMAAAQDPSSAISAAEKEEVDL-RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILT 611
AE + +A ++ S E + +L R ++V N+ ++ + ++ + F CGTVN V I+
Sbjct: 69 AEKETSADEETSQEEKTEETQNSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIR 128
Query: 612 DKFGQPKGFAYVEFVEEEAVQNSLVLNET-ELHGRQIKVSAKR 737
K G+ +GFA+V E Q ++ +T ++ GR I VS R
Sbjct: 129 QKDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFAR 171
>TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine-rich
RNA-binding protein 5); ATP binding / RNA binding |
chr1:27915346-27916857 FORWARD
Length = 290
Score = 49 bits (115), Expect = 5e-006
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = +3
Query: 516 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEEEAVQNSLVLN 692
I+VG + Y+ +++ F G V I+ D+ G+ +GFA+V F E N++ L+
Sbjct: 36 IFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQLD 95
Query: 693 ETELHGRQIKV--SAKRTNVPGMRQFRG 770
+LHGR+I+V + +R + G R F G
Sbjct: 96 GQDLHGRRIRVNYATERGSGFGGRGFGG 123
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,992,025,348
Number of Sequences: 33410
Number of Extensions: 21992025348
Number of Successful Extensions: 696879318
Number of sequences better than 0.0: 0
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