BLASTX 7.6.2
Query= UN45438 /QuerySize=691
(690 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G15000.1 | Symbols: | 60S ribosomal protein L... 262 1e-070
TAIR9_protein||AT3G22230.1 | Symbols: | 60S ribosomal protein L... 253 1e-067
TAIR9_protein||AT4G15000.2 | Symbols: | 60S ribosomal protein L... 235 3e-062
TAIR9_protein||AT2G32220.1 | Symbols: | 60S ribosomal protein L... 231 4e-061
>TAIR9_protein||AT4G15000.1 | Symbols: | 60S ribosomal protein L27 (RPL27C) |
chr4:8571896-8572303 FORWARD
Length = 136
Score = 262 bits (669), Expect = 1e-070
Identities = 129/136 (94%), Positives = 134/136 (98%)
Frame = +1
Query: 34 MVKFLKQNKAVILLQGRYAGKKAVIIRSFDDGNRERPYGHCLVAGLRKYPSKVIRKDSAK 213
MVKFLKQNKAVILLQGRYAGKKAVII+SFDDGNR+RPYGHCLVAGL+KYPSKVIRKDSAK
Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60
Query: 214 KTAKKSRVKCFIKVVNYQHLMPTRYTLDVDLKEVATLEALSSKDKKVAALKEAKAKLEER 393
KTAKKSRVKCFIK+VNYQHLMPTRYTLDVDLKEVATL+AL SKDKKVAALKEAKAKLEER
Sbjct: 61 KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120
Query: 394 FKTGKNRWFFTKLRF* 441
FKTGKNRWFFTKLRF*
Sbjct: 121 FKTGKNRWFFTKLRF* 136
>TAIR9_protein||AT3G22230.1 | Symbols: | 60S ribosomal protein L27 (RPL27B) |
chr3:7844136-7844543 REVERSE
Length = 136
Score = 253 bits (644), Expect = 1e-067
Identities = 125/136 (91%), Positives = 130/136 (95%)
Frame = +1
Query: 34 MVKFLKQNKAVILLQGRYAGKKAVIIRSFDDGNRERPYGHCLVAGLRKYPSKVIRKDSAK 213
MVKFLKQNKAVILLQGRYAGKKAVII+SFDDG +R YGHCLVAGL+KYPSKVIRKDSAK
Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAK 60
Query: 214 KTAKKSRVKCFIKVVNYQHLMPTRYTLDVDLKEVATLEALSSKDKKVAALKEAKAKLEER 393
KTAKKSRVKCFIK+VNYQHLMPTRYTLDVDLKEVATL+AL SKDKKV ALKEAKAKLEER
Sbjct: 61 KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEER 120
Query: 394 FKTGKNRWFFTKLRF* 441
FKTGKNRWFFTKLRF*
Sbjct: 121 FKTGKNRWFFTKLRF* 136
>TAIR9_protein||AT4G15000.2 | Symbols: | 60S ribosomal protein L27 (RPL27C) |
chr4:8571896-8572387 FORWARD
Length = 132
Score = 235 bits (598), Expect = 3e-062
Identities = 117/123 (95%), Positives = 122/123 (99%)
Frame = +1
Query: 34 MVKFLKQNKAVILLQGRYAGKKAVIIRSFDDGNRERPYGHCLVAGLRKYPSKVIRKDSAK 213
MVKFLKQNKAVILLQGRYAGKKAVII+SFDDGNR+RPYGHCLVAGL+KYPSKVIRKDSAK
Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60
Query: 214 KTAKKSRVKCFIKVVNYQHLMPTRYTLDVDLKEVATLEALSSKDKKVAALKEAKAKLEER 393
KTAKKSRVKCFIK+VNYQHLMPTRYTLDVDLKEVATL+AL SKDKKVAALKEAKAKLEER
Sbjct: 61 KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120
Query: 394 FKT 402
FKT
Sbjct: 121 FKT 123
>TAIR9_protein||AT2G32220.1 | Symbols: | 60S ribosomal protein L27 (RPL27A) |
chr2:13678945-13679352 FORWARD
Length = 136
Score = 231 bits (588), Expect = 4e-061
Identities = 111/136 (81%), Positives = 122/136 (89%)
Frame = +1
Query: 34 MVKFLKQNKAVILLQGRYAGKKAVIIRSFDDGNRERPYGHCLVAGLRKYPSKVIRKDSAK 213
MVK +K KAVILLQGRY GKKAVI++SFDDG E+ YGHCLVAGL+KYPSKVIRKDSAK
Sbjct: 1 MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAK 60
Query: 214 KTAKKSRVKCFIKVVNYQHLMPTRYTLDVDLKEVATLEALSSKDKKVAALKEAKAKLEER 393
KTAKKSRVKCF KV+NYQH+MPTRYTLD+DLK V + +A+SSKDKKV ALKEAKAK EER
Sbjct: 61 KTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEER 120
Query: 394 FKTGKNRWFFTKLRF* 441
FKTGKNRWFFTKLRF*
Sbjct: 121 FKTGKNRWFFTKLRF* 136
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,992,025,348
Number of Sequences: 33410
Number of Extensions: 21992025348
Number of Successful Extensions: 696879318
Number of sequences better than 0.0: 0
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