Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN45535


BLASTX 7.6.2

Query= UN45535 /QuerySize=565
        (564 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|297846906|ref|XP_002891334.1| hypothetical protein ARALYDRAFT...     99   3e-019
gi|116830235|gb|ABK28075.1| unknown [Arabidopsis thaliana]              95   5e-018
gi|98962173|gb|ABF59416.1| unknown protein [Arabidopsis thaliana]       92   3e-017

>gi|297846906|ref|XP_002891334.1| hypothetical protein ARALYDRAFT_891486
        [Arabidopsis lyrata subsp. lyrata]

          Length = 83

 Score =  99 bits (245), Expect = 3e-019
 Identities = 55/85 (64%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
 Frame = -3

Query: 331 MAKKLLVVLFTILLVHMSLIISGVDCRALKTEQMNGCDQ-MATLDGGGFSFFSAAGAANS 155
           M KK++++L  I LV    II GVDCRAL+TEQ  GCDQ  AT++ GGF FFS  GAAN 
Sbjct:   1 MEKKIMILLCIIFLVETFSIIGGVDCRALRTEQTTGCDQTTATVENGGFGFFS--GAANG 58

Query: 154 SRIP-LMRSLAFRLASGPSKRGRGH 83
           SR   LMRSLAFRLASGPS++GRGH
Sbjct:  59 SRDHLLMRSLAFRLASGPSRKGRGH 83

>gi|116830235|gb|ABK28075.1| unknown [Arabidopsis thaliana]

          Length = 90

 Score =  95 bits (234), Expect = 5e-018
 Identities = 54/91 (59%), Positives = 64/91 (70%), Gaps = 10/91 (10%)
 Frame = -3

Query: 331 MAKKLLVVLFTILLVHMSLIISGVDCRALKTEQMNGCDQ-------MATLDGGGFSFFSA 173
           M KKL+++L  I LV +  I+ GVDCRAL+TEQ  GCDQ        AT++ GGF  FS 
Sbjct:   1 MEKKLMILLCIIFLVEVFSILGGVDCRALRTEQTTGCDQTTGCDQTTATVESGGFGVFS- 59

Query: 172 AGAANSSRIP-LMRSLAFRLASGPSKRGRGH 83
            GAAN SR   LMRSLAFRLASGPS++GRGH
Sbjct:  60 -GAANGSRDHLLMRSLAFRLASGPSRKGRGH 89

>gi|98962173|gb|ABF59416.1| unknown protein [Arabidopsis thaliana]

          Length = 89

 Score =  92 bits (228), Expect = 3e-017
 Identities = 53/91 (58%), Positives = 63/91 (69%), Gaps = 10/91 (10%)
 Frame = -3

Query: 331 MAKKLLVVLFTILLVHMSLIISGVDCRALKTEQMNGCDQ-------MATLDGGGFSFFSA 173
           M KKL+++L  I LV +  I+ GVDCRAL+T Q  GCDQ        AT++ GGF  FS 
Sbjct:   1 MEKKLMILLCIIFLVEVFSILGGVDCRALRTXQTTGCDQTTGCDQTTATVESGGFGVFS- 59

Query: 172 AGAANSSRIP-LMRSLAFRLASGPSKRGRGH 83
            GAAN SR   LMRSLAFRLASGPS++GRGH
Sbjct:  60 -GAANGSRDHLLMRSLAFRLASGPSRKGRGH 89

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,939,538,178,972
Number of Sequences: 15229318
Number of Extensions: 4939538178972
Number of Successful Extensions: 1157257337
Number of sequences better than 0.0: 0