BLASTX 7.6.2
Query= UN45699 /QuerySize=738
(737 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G63780.1 | Symbols: SHA1 | SHA1 (shoot apical ... 280 1e-075
TAIR9_protein||AT5G08750.1 | Symbols: | zinc finger (C3HC4-type... 252 3e-067
TAIR9_protein||AT5G08750.2 | Symbols: | zinc finger (C3HC4-type... 252 3e-067
TAIR9_protein||AT5G08750.3 | Symbols: | zinc finger (C3HC4-type... 252 3e-067
>TAIR9_protein||AT5G63780.1 | Symbols: SHA1 | SHA1 (shoot apical meristem arrest
1); protein binding / zinc ion binding | chr5:25525160-25526446
FORWARD
Length = 368
Score = 280 bits (714), Expect = 1e-075
Identities = 139/164 (84%), Positives = 151/164 (92%), Gaps = 2/164 (1%)
Frame = +3
Query: 9 VLPVNTESTIDADEVAAIRRQRLSEISSWFGPHSLNNHNNSSSVAASQATPEQSLGVVSF 188
VLPVNT+STID+DEVA IRRQRLSEI+SWFGPHSLNN+NN++S A A P+Q LGVV+F
Sbjct: 206 VLPVNTDSTIDSDEVAVIRRQRLSEITSWFGPHSLNNNNNNNSSVA--AIPDQPLGVVNF 263
Query: 189 GVLPTENRATKWAVEGTGILLATGLLTVTLVWLIAPRVGKKTARSGLHILLGGLCALTIV 368
+LP ENRATKWAVEGTGILLATGLLTVTLVWLIAPRVGKKTARSGLHILLGGLCALTIV
Sbjct: 264 DILPMENRATKWAVEGTGILLATGLLTVTLVWLIAPRVGKKTARSGLHILLGGLCALTIV 323
Query: 369 IFFRFVVLTRIKYGPARYWAILFIFWFLVFGIWASRSSHGDS*P 500
IFFRFVVLTRI+YGPARYWAILFIFWFLVFGIWASRS+ + P
Sbjct: 324 IFFRFVVLTRIRYGPARYWAILFIFWFLVFGIWASRSNASHNSP 367
>TAIR9_protein||AT5G08750.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:2853066-2854343 FORWARD
Length = 364
Score = 252 bits (641), Expect = 3e-067
Identities = 128/167 (76%), Positives = 142/167 (85%), Gaps = 8/167 (4%)
Frame = +3
Query: 21 NTEST-IDADEVAAIRRQRLSEISSWFGPHSLNNHNNSSSVAA-----SQATPEQSLGVV 182
NT S+ ID D VAAIRRQRLSEIS WFGPH N+NNSS+ AA SQ T EQ +G+V
Sbjct: 198 NTSSSGIDPDAVAAIRRQRLSEISLWFGPHCSTNNNNSSNSAAAGTASSQVTSEQPVGIV 257
Query: 183 SFGVLPTENRATKWAVEGTGILLATGLLTVTLVWLIAPRVGKKTARSGLHILLGGLCALT 362
+F +LP E+RATKWAVEGTGILLATGLLTVTL WLIAPRVGK+TA+SGLHILLGGLCALT
Sbjct: 258 NFDILPMESRATKWAVEGTGILLATGLLTVTLAWLIAPRVGKRTAKSGLHILLGGLCALT 317
Query: 363 IVIFFRFVVLTRIKYGPARYWAILFIFWFLVFGIWASRS--SHGDS* 497
+VIFFRFVVLTRI+YGPARYWAILF+FWFLVFGIWASRS SH +*
Sbjct: 318 VVIFFRFVVLTRIRYGPARYWAILFVFWFLVFGIWASRSHASHSST* 364
>TAIR9_protein||AT5G08750.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:2853066-2854343 FORWARD
Length = 364
Score = 252 bits (641), Expect = 3e-067
Identities = 128/167 (76%), Positives = 142/167 (85%), Gaps = 8/167 (4%)
Frame = +3
Query: 21 NTEST-IDADEVAAIRRQRLSEISSWFGPHSLNNHNNSSSVAA-----SQATPEQSLGVV 182
NT S+ ID D VAAIRRQRLSEIS WFGPH N+NNSS+ AA SQ T EQ +G+V
Sbjct: 198 NTSSSGIDPDAVAAIRRQRLSEISLWFGPHCSTNNNNSSNSAAAGTASSQVTSEQPVGIV 257
Query: 183 SFGVLPTENRATKWAVEGTGILLATGLLTVTLVWLIAPRVGKKTARSGLHILLGGLCALT 362
+F +LP E+RATKWAVEGTGILLATGLLTVTL WLIAPRVGK+TA+SGLHILLGGLCALT
Sbjct: 258 NFDILPMESRATKWAVEGTGILLATGLLTVTLAWLIAPRVGKRTAKSGLHILLGGLCALT 317
Query: 363 IVIFFRFVVLTRIKYGPARYWAILFIFWFLVFGIWASRS--SHGDS* 497
+VIFFRFVVLTRI+YGPARYWAILF+FWFLVFGIWASRS SH +*
Sbjct: 318 VVIFFRFVVLTRIRYGPARYWAILFVFWFLVFGIWASRSHASHSST* 364
>TAIR9_protein||AT5G08750.3 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:2852912-2854343 FORWARD
Length = 371
Score = 252 bits (641), Expect = 3e-067
Identities = 128/167 (76%), Positives = 142/167 (85%), Gaps = 8/167 (4%)
Frame = +3
Query: 21 NTEST-IDADEVAAIRRQRLSEISSWFGPHSLNNHNNSSSVAA-----SQATPEQSLGVV 182
NT S+ ID D VAAIRRQRLSEIS WFGPH N+NNSS+ AA SQ T EQ +G+V
Sbjct: 205 NTSSSGIDPDAVAAIRRQRLSEISLWFGPHCSTNNNNSSNSAAAGTASSQVTSEQPVGIV 264
Query: 183 SFGVLPTENRATKWAVEGTGILLATGLLTVTLVWLIAPRVGKKTARSGLHILLGGLCALT 362
+F +LP E+RATKWAVEGTGILLATGLLTVTL WLIAPRVGK+TA+SGLHILLGGLCALT
Sbjct: 265 NFDILPMESRATKWAVEGTGILLATGLLTVTLAWLIAPRVGKRTAKSGLHILLGGLCALT 324
Query: 363 IVIFFRFVVLTRIKYGPARYWAILFIFWFLVFGIWASRS--SHGDS* 497
+VIFFRFVVLTRI+YGPARYWAILF+FWFLVFGIWASRS SH +*
Sbjct: 325 VVIFFRFVVLTRIRYGPARYWAILFVFWFLVFGIWASRSHASHSST* 371
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,035,721,855
Number of Sequences: 33410
Number of Extensions: 22035721855
Number of Successful Extensions: 696891752
Number of sequences better than 0.0: 0
|