BLASTX 7.6.2
Query= UN45760 /QuerySize=618
(617 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|119720746|gb|ABL97943.1| component of 6.1 kDa polypeptide of ... 138 9e-031
gi|950023|emb|CAA62296.1| component of 6.1 kDa polypeptide of ph... 129 3e-028
gi|15224531|ref|NP_180615.1| photosystem II reaction center W pr... 129 3e-028
gi|297826473|ref|XP_002881119.1| hypothetical protein ARALYDRAFT... 129 3e-028
gi|255626603|gb|ACU13646.1| unknown [Glycine max] 117 1e-024
gi|255627917|gb|ACU14303.1| unknown [Glycine max] 117 2e-024
gi|16930765|gb|AAL32042.1|AF439283_1 photosystem II reaction cen... 116 2e-024
gi|225437235|ref|XP_002282059.1| PREDICTED: hypothetical protein... 116 3e-024
gi|255626853|gb|ACU13771.1| unknown [Glycine max] 115 5e-024
gi|2493694|sp|Q41387.1|PSBW_SPIOL RecName: Full=Photosystem II r... 114 1e-023
gi|255559939|ref|XP_002520988.1| Photosystem II reaction center ... 114 1e-023
gi|147802575|emb|CAN68593.1| hypothetical protein VITISV_016961 ... 113 2e-023
gi|225453018|ref|XP_002264508.1| PREDICTED: hypothetical protein... 113 2e-023
gi|224085585|ref|XP_002307627.1| hypothetical protein POPTRDRAFT... 112 3e-023
gi|255631268|gb|ACU16001.1| unknown [Glycine max] 112 5e-023
gi|224062236|ref|XP_002300801.1| hypothetical protein POPTRDRAFT... 111 1e-022
gi|118489315|gb|ABK96462.1| unknown [Populus trichocarpa x Popul... 109 3e-022
gi|217071582|gb|ACJ84151.1| unknown [Medicago truncatula] 109 3e-022
gi|255580931|ref|XP_002531284.1| Photosystem II reaction center ... 107 2e-021
gi|226508870|ref|NP_001150205.1| LOC100283835 [Zea mays] 106 2e-021
>gi|119720746|gb|ABL97943.1| component of 6.1 kDa polypeptide of photosystem II
reaction center [Brassica rapa]
Length = 133
Score = 138 bits (345), Expect = 9e-031
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = -2
Query: 394 STAALTAVMSSPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLD 215
+TAALTAVMS+PAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLD
Sbjct: 65 ATAALTAVMSNPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLD 124
Query: 214 EDEESGLSL 188
EDEESGLSL
Sbjct: 125 EDEESGLSL 133
>gi|950023|emb|CAA62296.1| component of 6.1 kDa polypeptide of photosystem II
reaction center [Arabidopsis thaliana]
Length = 133
Score = 129 bits (324), Expect = 3e-028
Identities = 62/69 (89%), Positives = 67/69 (97%)
Frame = -2
Query: 394 STAALTAVMSSPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLD 215
+TAALTAVMS+PAMALVD+RMSTEGTGLPFGLSNNLLGWIL GVFGLIWTF+F YTSSL+
Sbjct: 65 ATAALTAVMSNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFAYTSSLE 124
Query: 214 EDEESGLSL 188
EDEESGLSL
Sbjct: 125 EDEESGLSL 133
>gi|15224531|ref|NP_180615.1| photosystem II reaction center W protein
[Arabidopsis thaliana]
Length = 133
Score = 129 bits (324), Expect = 3e-028
Identities = 62/69 (89%), Positives = 67/69 (97%)
Frame = -2
Query: 394 STAALTAVMSSPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLD 215
+TAALTAVMS+PAMALVD+RMSTEGTGLPFGLSNNLLGWIL GVFGLIWTF+F YTSSL+
Sbjct: 65 ATAALTAVMSNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYTSSLE 124
Query: 214 EDEESGLSL 188
EDEESGLSL
Sbjct: 125 EDEESGLSL 133
>gi|297826473|ref|XP_002881119.1| hypothetical protein ARALYDRAFT_902045
[Arabidopsis lyrata subsp. lyrata]
Length = 133
Score = 129 bits (324), Expect = 3e-028
Identities = 62/69 (89%), Positives = 67/69 (97%)
Frame = -2
Query: 394 STAALTAVMSSPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLD 215
+TAALTAVMS+PAMALVD+RMSTEGTGLPFGLSNNLLGWIL GVFGLIWTF+F YTSSL+
Sbjct: 65 ATAALTAVMSNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYTSSLE 124
Query: 214 EDEESGLSL 188
EDEESGLSL
Sbjct: 125 EDEESGLSL 133
>gi|255626603|gb|ACU13646.1| unknown [Glycine max]
Length = 136
Score = 117 bits (292), Expect = 1e-024
Identities = 56/67 (83%), Positives = 59/67 (88%)
Frame = -2
Query: 388 AALTAVMSSPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLDED 209
AA A MS PAMALVD+R+STEGTGLPFGLSNNLLGWIL GVFGLIW YF YTSSL+ED
Sbjct: 70 AASAAAMSGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYTSSLEED 129
Query: 208 EESGLSL 188
EESGLSL
Sbjct: 130 EESGLSL 136
>gi|255627917|gb|ACU14303.1| unknown [Glycine max]
Length = 132
Score = 117 bits (291), Expect = 2e-024
Identities = 55/67 (82%), Positives = 60/67 (89%)
Frame = -2
Query: 388 AALTAVMSSPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLDED 209
AA+ A MSSPAMALVD+R+STEGTGLPFGLSNNLLGWIL GVFGLIW YF Y S+L+ED
Sbjct: 66 AAVAATMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYASTLEED 125
Query: 208 EESGLSL 188
EESGLSL
Sbjct: 126 EESGLSL 132
>gi|16930765|gb|AAL32042.1|AF439283_1 photosystem II reaction center [Retama
raetam]
Length = 96
Score = 116 bits (290), Expect = 2e-024
Identities = 56/69 (81%), Positives = 60/69 (86%)
Frame = -2
Query: 394 STAALTAVMSSPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLD 215
+ A A MSSPAMALVD+R+STEGTGLPFGLSNNLLGWIL VFGLIWTFYF Y SSL+
Sbjct: 28 AAACAAATMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFVVFGLIWTFYFIYASSLE 87
Query: 214 EDEESGLSL 188
EDEESGLSL
Sbjct: 88 EDEESGLSL 96
>gi|225437235|ref|XP_002282059.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 135
Score = 116 bits (289), Expect = 3e-024
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = -2
Query: 388 AALTAVMSSPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLDED 209
AA A MSSPAMALVD+RMSTEGTGLPFGLSNN LGWIL GVFGLIW YF YT++L+ED
Sbjct: 69 AACAATMSSPAMALVDERMSTEGTGLPFGLSNNTLGWILFGVFGLIWALYFVYTATLEED 128
Query: 208 EESGLSL 188
EESGLSL
Sbjct: 129 EESGLSL 135
>gi|255626853|gb|ACU13771.1| unknown [Glycine max]
Length = 133
Score = 115 bits (287), Expect = 5e-024
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = -2
Query: 388 AALTAVMSSPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLDED 209
AA A MS PAMALVD+R+STEGTGLPFGLSNNLLGWIL GVFGLIWT YF YTS+L+E
Sbjct: 67 AASAAAMSGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFVYTSTLEEG 126
Query: 208 EESGLSL 188
EESGLSL
Sbjct: 127 EESGLSL 133
>gi|2493694|sp|Q41387.1|PSBW_SPIOL RecName: Full=Photosystem II reaction center
W protein, chloroplastic; AltName: Full=PSII 6.1 kDa protein; Flags:
Precursor
Length = 137
Score = 114 bits (284), Expect = 1e-023
Identities = 54/67 (80%), Positives = 58/67 (86%)
Frame = -2
Query: 388 AALTAVMSSPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLDED 209
AA A +S+PAMALVD+RMSTEGTGLPFGLSNNLLGWIL GVFGLIW YF Y S L+ED
Sbjct: 71 AAAAATISNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYASGLEED 130
Query: 208 EESGLSL 188
EESGLSL
Sbjct: 131 EESGLSL 137
>gi|255559939|ref|XP_002520988.1| Photosystem II reaction center W protein,
chloroplast precursor, putative [Ricinus communis]
Length = 132
Score = 114 bits (283), Expect = 1e-023
Identities = 55/79 (69%), Positives = 67/79 (84%), Gaps = 4/79 (5%)
Frame = -2
Query: 412 RPSKETSTAALTAV----MSSPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWT 245
R +K S + + ++ MSSPA+ALVD+R+STEGTGLPFGLSNNLLGWILLGVFGLIW+
Sbjct: 54 RSNKGMSASLIASICGVTMSSPALALVDERLSTEGTGLPFGLSNNLLGWILLGVFGLIWS 113
Query: 244 FYFTYTSSLDEDEESGLSL 188
FY YTS+LD+DE+SGLSL
Sbjct: 114 FYTVYTSTLDDDEDSGLSL 132
>gi|147802575|emb|CAN68593.1| hypothetical protein VITISV_016961 [Vitis
vinifera]
Length = 70
Score = 113 bits (281), Expect = 2e-023
Identities = 52/69 (75%), Positives = 60/69 (86%)
Frame = -2
Query: 394 STAALTAVMSSPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLD 215
+ AA A + PAMALVD+R+STEGTGLPFGLSNNLLGWIL GVFGLIW YFTYT++L+
Sbjct: 2 AAAAAVAASAGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFTYTATLE 61
Query: 214 EDEESGLSL 188
ED+ESGLSL
Sbjct: 62 EDDESGLSL 70
>gi|225453018|ref|XP_002264508.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 135
Score = 113 bits (281), Expect = 2e-023
Identities = 52/69 (75%), Positives = 60/69 (86%)
Frame = -2
Query: 394 STAALTAVMSSPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLD 215
+ AA A + PAMALVD+R+STEGTGLPFGLSNNLLGWIL GVFGLIW YFTYT++L+
Sbjct: 67 AAAAAVAASAGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFTYTATLE 126
Query: 214 EDEESGLSL 188
ED+ESGLSL
Sbjct: 127 EDDESGLSL 135
>gi|224085585|ref|XP_002307627.1| hypothetical protein POPTRDRAFT_715100
[Populus trichocarpa]
Length = 134
Score = 112 bits (280), Expect = 3e-023
Identities = 55/73 (75%), Positives = 60/73 (82%)
Frame = -2
Query: 406 SKETSTAALTAVMSSPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYT 227
S A A MSSPA+ALVD+RMSTEGTGLPFGLSNNLL WILLGVF LIW YFTYT
Sbjct: 62 SASLMAAVCAASMSSPALALVDERMSTEGTGLPFGLSNNLLVWILLGVFALIWALYFTYT 121
Query: 226 SSLDEDEESGLSL 188
++L+EDEESGLSL
Sbjct: 122 ATLEEDEESGLSL 134
>gi|255631268|gb|ACU16001.1| unknown [Glycine max]
Length = 133
Score = 112 bits (278), Expect = 5e-023
Identities = 55/68 (80%), Positives = 60/68 (88%), Gaps = 1/68 (1%)
Frame = -2
Query: 388 AALTAVMSSP-AMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLDE 212
AA A MSSP AMALVD+R+STEGTGLPFGLSNNLLGWIL GVFGLIW +F YTS+L+E
Sbjct: 66 AAAAATMSSPAAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALFFVYTSTLEE 125
Query: 211 DEESGLSL 188
DEESGLSL
Sbjct: 126 DEESGLSL 133
>gi|224062236|ref|XP_002300801.1| hypothetical protein POPTRDRAFT_830089
[Populus trichocarpa]
Length = 134
Score = 111 bits (275), Expect = 1e-022
Identities = 53/73 (72%), Positives = 59/73 (80%)
Frame = -2
Query: 406 SKETSTAALTAVMSSPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYT 227
S A A +SSPA+ALVD+RMSTEGTGLPFGLSNNLL WILLGVF IW+ YF YT
Sbjct: 62 SASLMAAVCAATISSPALALVDERMSTEGTGLPFGLSNNLLVWILLGVFAFIWSLYFVYT 121
Query: 226 SSLDEDEESGLSL 188
SSLDEDE+SG+SL
Sbjct: 122 SSLDEDEDSGMSL 134
>gi|118489315|gb|ABK96462.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 133
Score = 109 bits (272), Expect = 3e-022
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = -2
Query: 406 SKETSTAALTAVMSSPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYT 227
S A A +SSPA+ALVD+R+STEGTGLPFGLSNNLL WILLGVF IW+ YF YT
Sbjct: 61 SASLMAAVCAATISSPALALVDERLSTEGTGLPFGLSNNLLVWILLGVFAFIWSLYFVYT 120
Query: 226 SSLDEDEESGLSL 188
SSLDEDE+SG+SL
Sbjct: 121 SSLDEDEDSGMSL 133
>gi|217071582|gb|ACJ84151.1| unknown [Medicago truncatula]
Length = 136
Score = 109 bits (272), Expect = 3e-022
Identities = 54/68 (79%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
Frame = -2
Query: 388 AALTAVMSSP-AMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLDE 212
A A +SSP AMALVD+RMSTEGTGLPFGLSNNLLGW+L GVFGLIW YF Y SSLDE
Sbjct: 69 AISAATLSSPAAMALVDERMSTEGTGLPFGLSNNLLGWLLFGVFGLIWALYFIYASSLDE 128
Query: 211 DEESGLSL 188
DE+SGLSL
Sbjct: 129 DEDSGLSL 136
>gi|255580931|ref|XP_002531284.1| Photosystem II reaction center W protein,
chloroplast precursor, putative [Ricinus communis]
Length = 134
Score = 107 bits (265), Expect = 2e-021
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = -2
Query: 394 STAALTAVMSSPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLD 215
+ A+ A + PAMALVD+RMSTEGTGLPFGLSNNLLGWILLGVF LIW+ Y YTS+LD
Sbjct: 66 AAASAVAATAGPAMALVDERMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLD 125
Query: 214 EDEESGLSL 188
ED++S LSL
Sbjct: 126 EDDDSALSL 134
>gi|226508870|ref|NP_001150205.1| LOC100283835 [Zea mays]
Length = 127
Score = 106 bits (264), Expect = 2e-021
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = -2
Query: 406 SKETSTAALTAVMSSPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYT 227
S A +AV +SP +ALVD+RMSTEGTGL GLSNNLLGWILLGVFGLIW+ Y YT
Sbjct: 55 SSSLLAVATSAVTTSPXLALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYT 114
Query: 226 SSLDEDEESGLSL 188
S+LDED++SGLSL
Sbjct: 115 STLDEDDDSGLSL 127
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,939,538,178,972
Number of Sequences: 15229318
Number of Extensions: 4939538178972
Number of Successful Extensions: 1157257337
Number of sequences better than 0.0: 0
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