Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN45773


BLASTX 7.6.2

Query= UN45773 /QuerySize=822
        (821 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|143015239|sp|Q9LJF9.2|FBL46_ARATH RecName: Full=F-box/LRR-rep...    114   3e-023
gi|15229076|ref|NP_190472.1| putative F-box/FBD/LRR-repeat prote...     85   1e-014
gi|334185830|ref|NP_001190036.1| putative F-box/FBD/LRR-repeat p...     85   1e-014
gi|15241204|ref|NP_200450.1| putative FBD-associated F-box prote...     76   6e-012
gi|297796523|ref|XP_002866146.1| F-box family protein [Arabidops...     75   1e-011
gi|75262451|sp|Q9FGR8.1|FBD19_ARATH RecName: Full=Putative FBD-a...     74   2e-011
gi|22327683|ref|NP_199838.2| FBD domain-containing protein [Arab...     74   2e-011
gi|75262701|sp|Q9FM91.1|FBD23_ARATH RecName: Full=Putative FBD-a...     72   9e-011
gi|22327886|ref|NP_200451.2| FBD, F-box, Skp2-like and leucine r...     72   9e-011
gi|297812663|ref|XP_002874215.1| hypothetical protein ARALYDRAFT...     66   6e-009
gi|22327891|ref|NP_200467.2| FBD, F-box and leucine rich repeat ...     60   3e-007
gi|10176759|dbj|BAB09873.1| unnamed protein product [Arabidopsis...     60   3e-007
gi|261278281|sp|Q9FJV2.2|FBD27_ARATH RecName: Full=Putative FBD-...     60   3e-007
gi|242042794|ref|XP_002459268.1| hypothetical protein SORBIDRAFT...     60   5e-007
gi|7413567|emb|CAB86046.1| putative protein [Arabidopsis thaliana]      58   1e-006
gi|145357569|ref|NP_568109.2| F-box/LRR-repeat protein 25 [Arabi...     58   1e-006
gi|33146551|dbj|BAC79728.1| unknown protein [Oryza sativa Japoni...     57   3e-006
gi|125557049|gb|EAZ02585.1| hypothetical protein OsI_24695 [Oryz...     57   3e-006

>gi|143015239|sp|Q9LJF9.2|FBL46_ARATH RecName: Full=F-box/LRR-repeat protein
        At3g26920

          Length = 434

 Score =  114 bits (283), Expect = 3e-023
 Identities = 73/160 (45%), Positives = 103/160 (64%), Gaps = 9/160 (5%)
 Frame = +3

Query: 243 DRISKLPDAVLVKILSSLPTTKDVVATSVLSKQWRSLWKMVPKLTFSYNGGNDIQGFSDS 422
           DRIS+LP+A+L++ILS LP TK+VVA SVL+K+WR LWKMVP L F Y    D++ FS +
Sbjct:  17 DRISQLPEALLLQILSLLP-TKEVVAVSVLAKRWRFLWKMVPSLEFFYYFTYDLERFSYN 75

Query: 423 VRRTMLSLEAPYLQSLHLDVE---GDRMDGFGELLGIARGLHVRELVLKLSGPDDNRHPI 593
           V + + S +AP+LQSLHL++      R+  F  L+GIA G  +R+LVLK+   D  + P 
Sbjct:  76 VSKCLFSHQAPFLQSLHLNMNFGCDPRIMDFEILIGIAFGRQLRKLVLKVYSGDWFKFPT 135

Query: 594 ILDNCPSLETLKVLGEYGSIALESLLPFVSSLLELCTFKI 713
            L N  +LETL++   Y  I ++  +PF   L  L T  +
Sbjct: 136 SLYNSETLETLEL---YHCILID--VPFPVCLKSLRTLNL 170

>gi|15229076|ref|NP_190472.1| putative F-box/FBD/LRR-repeat protein [Arabidopsis
        thaliana]

          Length = 443

 Score =  85 bits (208), Expect = 1e-014
 Identities = 53/108 (49%), Positives = 74/108 (68%), Gaps = 5/108 (4%)
 Frame = +3

Query: 243 DRISKLPDAVLVKILSSLPTTKDVVATSVLSKQWRSLWKMVPKLTFSYNGGNDI-QGFSD 419
           DRIS+LP+ +L++ILS +P T++V+ATSVLSK+WRSLWKMVP LTF +       Q FS+
Sbjct:  21 DRISELPEDLLLQILSDIP-TENVIATSVLSKRWRSLWKMVPNLTFDFTFDPKYHQTFSE 79

Query: 420 SVRRTMLSLEAPYLQSLHLDVEGDRMDG--FGELLGIARGLHVRELVL 557
           ++ R++ S EA  L+SL L+     +DG   G  +  A   HVR+LVL
Sbjct:  80 NLYRSLTSHEASVLESLQLNFTRG-IDGLNIGMWIATAYVRHVRKLVL 126

>gi|334185830|ref|NP_001190036.1| putative F-box/FBD/LRR-repeat protein
        [Arabidopsis thaliana]

          Length = 417

 Score =  85 bits (208), Expect = 1e-014
 Identities = 53/108 (49%), Positives = 74/108 (68%), Gaps = 5/108 (4%)
 Frame = +3

Query: 243 DRISKLPDAVLVKILSSLPTTKDVVATSVLSKQWRSLWKMVPKLTFSYNGGNDI-QGFSD 419
           DRIS+LP+ +L++ILS +P T++V+ATSVLSK+WRSLWKMVP LTF +       Q FS+
Sbjct:  21 DRISELPEDLLLQILSDIP-TENVIATSVLSKRWRSLWKMVPNLTFDFTFDPKYHQTFSE 79

Query: 420 SVRRTMLSLEAPYLQSLHLDVEGDRMDG--FGELLGIARGLHVRELVL 557
           ++ R++ S EA  L+SL L+     +DG   G  +  A   HVR+LVL
Sbjct:  80 NLYRSLTSHEASVLESLQLNFTRG-IDGLNIGMWIATAYVRHVRKLVL 126

>gi|15241204|ref|NP_200450.1| putative FBD-associated F-box protein [Arabidopsis
        thaliana]

          Length = 428

 Score =  76 bits (185), Expect = 6e-012
 Identities = 49/111 (44%), Positives = 69/111 (62%), Gaps = 6/111 (5%)
 Frame = +3

Query: 240 LDRISKLPDAVLVKILSSLPTTKDVVATSVLSKQWRSLWKMVPKLTF--SYNGGNDIQGF 413
           +D+IS+L D +L+ ILS LP  KDVVAT VLSK+WR LW MVP L +  SY    D   F
Sbjct:   1 MDKISQLHDELLLGILSLLPNAKDVVATMVLSKRWRYLWMMVPSLVYDDSYQ-DIDYGRF 59

Query: 414 SDSVRRTMLSLEAPYLQSLHLDVEGDRMDGFGE-LLGIARGLHVRELVLKL 563
           S  V R++   +AP + +LH  +    + G G+ L+G A    VR+L++K+
Sbjct:  60 SRFVDRSLALHKAPVIDTLHFKL--GHICGSGDTLIGAAEKCCVRKLIIKI 108

>gi|297796523|ref|XP_002866146.1| F-box family protein [Arabidopsis lyrata
        subsp. lyrata]

          Length = 455

 Score =  75 bits (183), Expect = 1e-011
 Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
 Frame = +3

Query: 237 HLDRISKLPDAVLVKILSSLPTTKDVVATSVLSKQWRSLWKMVPKLTFS--YNGGNDIQG 410
           ++D+IS LP+ +LV ILS LPTT D+VATS +SK+W+SLWK V KL F+     G   + 
Sbjct:  31 NVDKISDLPEDLLVHILSLLPTTNDIVATSGVSKRWKSLWKKVHKLRFNDQIYHGKKYES 90

Query: 411 FSDSVRRTMLSLEAPYLQSLHLDVEGD-RMDGFGELLGIARGLHVRELVLK 560
           F   V + ++  +AP L SL L V      D  G  + +A   ++ EL++K
Sbjct:  91 FLHFVEKALVLHKAPTLVSLRLSVGPKCTADDIGLWIKLALDRNICELIIK 141

>gi|75262451|sp|Q9FGR8.1|FBD19_ARATH RecName: Full=Putative FBD-associated F-box
        protein At5g50270

          Length = 423

 Score =  74 bits (180), Expect = 2e-011
 Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
 Frame = +3

Query: 240 LDRISKLPDAVLVKILSSLPTTKDVVATSVLSKQWRSLWKMVPKLTFSYNGGNDIQG-FS 416
           +DRIS LPD +L+++LS LP  KDVV T VLSK+W+ LW MVPKL +  +  N   G FS
Sbjct:   1 MDRISGLPDELLLRVLSLLPNVKDVVVTMVLSKRWQFLWMMVPKLVYDDSYQNLEYGKFS 60

Query: 417 DSVRRTMLSLEAPYLQSLH 473
             V R++   +AP +++LH
Sbjct:  61 RFVDRSLFMRKAPGIETLH 79

>gi|22327683|ref|NP_199838.2| FBD domain-containing protein [Arabidopsis
        thaliana]

          Length = 381

 Score =  74 bits (180), Expect = 2e-011
 Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
 Frame = +3

Query: 240 LDRISKLPDAVLVKILSSLPTTKDVVATSVLSKQWRSLWKMVPKLTFSYNGGNDIQG-FS 416
           +DRIS LPD +L+++LS LP  KDVV T VLSK+W+ LW MVPKL +  +  N   G FS
Sbjct:   1 MDRISGLPDELLLRVLSLLPNVKDVVVTMVLSKRWQFLWMMVPKLVYDDSYQNLEYGKFS 60

Query: 417 DSVRRTMLSLEAPYLQSLH 473
             V R++   +AP +++LH
Sbjct:  61 RFVDRSLFMRKAPGIETLH 79

>gi|75262701|sp|Q9FM91.1|FBD23_ARATH RecName: Full=Putative FBD-associated F-box
        protein At5g56400

          Length = 450

 Score =  72 bits (175), Expect = 9e-011
 Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
 Frame = +3

Query: 237 HLDRISKLPDAVLVKILSSLPTTKDVVATSVLSKQWRSLWKMVPKLTFS--YNGGNDIQG 410
           ++D+IS LP+ +LV ILS LPTT D+VATS +SK+W SLW  V KL F+     G     
Sbjct:  31 NVDKISDLPEDLLVHILSLLPTTNDIVATSGVSKRWESLWTKVHKLRFNDRIYDGKRYDS 90

Query: 411 FSDSVRRTMLSLEAPYLQSLHLDVEGD-RMDGFGELLGIARGLHVRELVLK 560
           F   V ++++  +AP L SL L V      D  G  + +A   ++ EL++K
Sbjct:  91 FLHFVEKSLILHKAPTLVSLRLSVGPKCTADDIGLWIKLALDRNICELIIK 141

>gi|22327886|ref|NP_200451.2| FBD, F-box, Skp2-like and leucine rich repeat
        domain-containing protein [Arabidopsis thaliana]

          Length = 455

 Score =  72 bits (175), Expect = 9e-011
 Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
 Frame = +3

Query: 237 HLDRISKLPDAVLVKILSSLPTTKDVVATSVLSKQWRSLWKMVPKLTFS--YNGGNDIQG 410
           ++D+IS LP+ +LV ILS LPTT D+VATS +SK+W SLW  V KL F+     G     
Sbjct:  31 NVDKISDLPEDLLVHILSLLPTTNDIVATSGVSKRWESLWTKVHKLRFNDRIYDGKRYDS 90

Query: 411 FSDSVRRTMLSLEAPYLQSLHLDVEGD-RMDGFGELLGIARGLHVRELVLK 560
           F   V ++++  +AP L SL L V      D  G  + +A   ++ EL++K
Sbjct:  91 FLHFVEKSLILHKAPTLVSLRLSVGPKCTADDIGLWIKLALDRNICELIIK 141

>gi|297812663|ref|XP_002874215.1| hypothetical protein ARALYDRAFT_910512
        [Arabidopsis lyrata subsp. lyrata]

          Length = 307

 Score =  66 bits (159), Expect = 6e-009
 Identities = 32/50 (64%), Positives = 39/50 (78%)
 Frame = +3

Query: 231 IRHLDRISKLPDAVLVKILSSLPTTKDVVATSVLSKQWRSLWKMVPKLTF 380
           IR  DRIS LPD +L+ IL  LP TKDVVAT +LSK+WRS+W MVP+L +
Sbjct:  41 IRGEDRISALPDDLLMHILLFLPGTKDVVATMILSKRWRSIWTMVPRLGY 90

>gi|22327891|ref|NP_200467.2| FBD, F-box and leucine rich repeat
        domain-containing protein [Arabidopsis thaliana]

          Length = 607

 Score =  60 bits (145), Expect = 3e-007
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
 Frame = +3

Query: 246 RISKLPDAVLVKILSSLPTTKDVVATSVLSKQWRSLWKMVPKLTFSYNG--GNDIQGFSD 419
           R+S LPD +L+KILS+LP  K  +AT ++S++W+  WK+VP +TF  +       + F  
Sbjct:   6 RLSDLPDELLLKILSALPMFKVTLATRLISRRWKGPWKLVPDVTFDDDDIPFKSFETFMS 65

Query: 420 SVRRTMLSLEAPYLQSLHLDV-EGDRMDGFGELLGIARGLHVRELVLKLSGPDDNRHPII 596
            V  + LS +A  L  LHL + +          + +A    VREL + L G      P  
Sbjct:  66 FVYGSFLSNDAQILDRLHLKLNQKYSASDINFWVQVAVNRSVRELRIDLFG-KTLELPCC 124

Query: 597 LDNCPSLETL 626
           L +C +L+ L
Sbjct: 125 LCSCITLKEL 134

>gi|10176759|dbj|BAB09873.1| unnamed protein product [Arabidopsis thaliana]

          Length = 477

 Score =  60 bits (145), Expect = 3e-007
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
 Frame = +3

Query: 246 RISKLPDAVLVKILSSLPTTKDVVATSVLSKQWRSLWKMVPKLTFSYNG--GNDIQGFSD 419
           R+S LPD +L+KILS+LP  K  +AT ++S++W+  WK+VP +TF  +       + F  
Sbjct:   6 RLSDLPDELLLKILSALPMFKVTLATRLISRRWKGPWKLVPDVTFDDDDIPFKSFETFMS 65

Query: 420 SVRRTMLSLEAPYLQSLHLDV-EGDRMDGFGELLGIARGLHVRELVLKLSGPDDNRHPII 596
            V  + LS +A  L  LHL + +          + +A    VREL + L G      P  
Sbjct:  66 FVYGSFLSNDAQILDRLHLKLNQKYSASDINFWVQVAVNRSVRELRIDLFG-KTLELPCC 124

Query: 597 LDNCPSLETL 626
           L +C +L+ L
Sbjct: 125 LCSCITLKEL 134

>gi|261278281|sp|Q9FJV2.2|FBD27_ARATH RecName: Full=Putative FBD-associated
        F-box protein At5g56560

          Length = 418

 Score =  60 bits (145), Expect = 3e-007
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
 Frame = +3

Query: 246 RISKLPDAVLVKILSSLPTTKDVVATSVLSKQWRSLWKMVPKLTFSYNG--GNDIQGFSD 419
           R+S LPD +L+KILS+LP  K  +AT ++S++W+  WK+VP +TF  +       + F  
Sbjct:   6 RLSDLPDELLLKILSALPMFKVTLATRLISRRWKGPWKLVPDVTFDDDDIPFKSFETFMS 65

Query: 420 SVRRTMLSLEAPYLQSLHLDV-EGDRMDGFGELLGIARGLHVRELVLKLSGPDDNRHPII 596
            V  + LS +A  L  LHL + +          + +A    VREL + L G      P  
Sbjct:  66 FVYGSFLSNDAQILDRLHLKLNQKYSASDINFWVQVAVNRSVRELRIDLFG-KTLELPCC 124

Query: 597 LDNCPSLETL 626
           L +C +L+ L
Sbjct: 125 LCSCITLKEL 134

>gi|242042794|ref|XP_002459268.1| hypothetical protein SORBIDRAFT_02g001550
        [Sorghum bicolor]

          Length = 493

 Score =  60 bits (143), Expect = 5e-007
 Identities = 25/49 (51%), Positives = 36/49 (73%)
 Frame = +3

Query: 240 LDRISKLPDAVLVKILSSLPTTKDVVATSVLSKQWRSLWKMVPKLTFSY 386
           +DR+S LPD +L KILSS+  + D V T +LS+ WR LWK++P+L F +
Sbjct:   1 MDRLSPLPDDILAKILSSIDNSPDAVRTCLLSRSWRPLWKLLPELRFPF 49

>gi|7413567|emb|CAB86046.1| putative protein [Arabidopsis thaliana]

          Length = 345

 Score =  58 bits (139), Expect = 1e-006
 Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
 Frame = +3

Query: 234 RHLDRISKLPDAVLVKILSSLPTTKDVVATSVLSKQWRSLWKMVPKLTFSYNGGNDIQGF 413
           R  D IS LPD +L  ILS +P T  V+ TSVLSK+WR +W   P L+F +     +   
Sbjct:  25 RSSDSISNLPDEILHHILSFIPETNLVIRTSVLSKRWRHVWSKTPHLSFEW-----LMVS 79

Query: 414 SDSVRRTMLSLEAPYLQSLHL 476
              + +T+ S  A  + S HL
Sbjct:  80 PKLINKTLASYTASKITSFHL 100

>gi|145357569|ref|NP_568109.2| F-box/LRR-repeat protein 25 [Arabidopsis
        thaliana]

          Length = 258

 Score =  58 bits (139), Expect = 1e-006
 Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
 Frame = +3

Query: 234 RHLDRISKLPDAVLVKILSSLPTTKDVVATSVLSKQWRSLWKMVPKLTFSYNGGNDIQGF 413
           R  D IS LPD +L  ILS +P T  V+ TSVLSK+WR +W   P L+F +     +   
Sbjct:  25 RSSDSISNLPDEILHHILSFIPETNLVIRTSVLSKRWRHVWSKTPHLSFEW-----LMVS 79

Query: 414 SDSVRRTMLSLEAPYLQSLHL 476
              + +T+ S  A  + S HL
Sbjct:  80 PKLINKTLASYTASKITSFHL 100

>gi|33146551|dbj|BAC79728.1| unknown protein [Oryza sativa Japonica Group]

          Length = 437

 Score =  57 bits (136), Expect = 3e-006
 Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
 Frame = +3

Query: 243 DRISKLPDAVLVKILSSLPTTKDVVATSVLSKQWRSLWKMVPKLTF--SYNGGNDIQGFS 416
           DR+S LPD +LV++L  +  T     TSVLS++WRSLW ++P+L F    +GG       
Sbjct:  28 DRLSALPDDLLVQVLLRIGGTTAAARTSVLSRRWRSLWCLLPELDFVPEADGG------- 80

Query: 417 DSVRRTMLSLEAPYLQSLHLDVEGDRMDGFGELLGIARGLHVRELVL 557
            S+R  + + E P L+ L +  +     G  E L +A      +L+L
Sbjct:  81 -SIRAALAAHEPPSLRHLLVAAQDAAPHGMAEWLPVAARRLAGDLLL 126

>gi|125557049|gb|EAZ02585.1| hypothetical protein OsI_24695 [Oryza sativa Indica
        Group]

          Length = 481

 Score =  57 bits (136), Expect = 3e-006
 Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
 Frame = +3

Query: 243 DRISKLPDAVLVKILSSLPTTKDVVATSVLSKQWRSLWKMVPKLTF--SYNGGNDIQGFS 416
           DR+S LPD +LV++L  +  T     TSVLS++WRSLW ++P+L F    +GG       
Sbjct:  28 DRLSALPDDLLVQVLLRIGGTTAAARTSVLSRRWRSLWCLLPELDFVPEADGG------- 80

Query: 417 DSVRRTMLSLEAPYLQSLHLDVEGDRMDGFGELLGIARGLHVRELVL 557
            S+R  + + E P L+ L +  +     G  E L +A      +L+L
Sbjct:  81 -SIRAALAAHEPPSLRHLLVAAQDAAPHGMAEWLPVAARRLAGDLLL 126

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,027,124,687,929
Number of Sequences: 15229318
Number of Extensions: 5027124687929
Number of Successful Extensions: 1168073280
Number of sequences better than 0.0: 0