BLASTX 7.6.2
Query= UN45866 /QuerySize=535
(534 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|164665690|gb|ABY66299.1| DNA repair protein RAD23 [Brassica n... 83 2e-014
gi|164665688|gb|ABY66298.1| RAD23-like protein [Brassica napus] 78 6e-013
gi|193872586|gb|ACF23021.1| ST6-40 [Eutrema halophilum] 68 6e-010
gi|297814221|ref|XP_002874994.1| hypothetical protein ARALYDRAFT... 62 3e-008
gi|297832888|ref|XP_002884326.1| hypothetical protein ARALYDRAFT... 62 4e-008
gi|15232924|ref|NP_186903.1| putative DNA repair protein RAD23-3... 61 6e-008
gi|42572233|ref|NP_974211.1| putative DNA repair protein RAD23-3... 61 6e-008
gi|334185033|ref|NP_001189793.1| putative DNA repair protein RAD... 61 6e-008
gi|90657579|gb|ABD96879.1| hypothetical protein [Cleome spinosa] 60 1e-007
gi|15240922|ref|NP_198663.1| putative DNA repair protein RAD23-4... 59 3e-007
gi|30409730|dbj|BAC76395.1| RAD23-like protein [Arabidopsis thal... 59 3e-007
gi|14335004|gb|AAK59766.1| unknown protein [Arabidopsis thaliana] 59 3e-007
gi|145334669|ref|NP_001078680.1| putative DNA repair protein RAD... 59 3e-007
gi|297805910|ref|XP_002870839.1| hypothetical protein ARALYDRAFT... 59 3e-007
gi|90657662|gb|ABD96960.1| hypothetical protein [Cleome spinosa] 58 6e-007
gi|18411555|ref|NP_567210.1| uncharacterized protein [Arabidopsi... 57 1e-006
gi|687677|gb|AAB00107.1| unknown [Arabidopsis thaliana] 57 1e-006
gi|186511415|ref|NP_001118909.1| uncharacterized protein [Arabid... 57 1e-006
gi|5640111|emb|CAB51544.1| RAD23 protein [Solanum lycopersicum v... 56 2e-006
gi|217069976|gb|ACJ83348.1| unknown [Medicago truncatula] 55 4e-006
>gi|164665690|gb|ABY66299.1| DNA repair protein RAD23 [Brassica napus]
Length = 327
Score = 83 bits (203), Expect = 2e-014
Identities = 41/51 (80%), Positives = 46/51 (90%)
Frame = -2
Query: 332 EQVVDVKKKIETVLGVTAAEQLLIHKGKVLKDETTVEANNVSEKSIIGVMK 180
+ V DVKK IETV+GVTAAEQ+LIHKGKVL+DETT+EAN VSEKSII VMK
Sbjct: 21 DSVADVKKNIETVMGVTAAEQMLIHKGKVLEDETTMEANEVSEKSIIAVMK 71
>gi|164665688|gb|ABY66298.1| RAD23-like protein [Brassica napus]
Length = 357
Score = 78 bits (190), Expect = 6e-013
Identities = 41/54 (75%), Positives = 47/54 (87%), Gaps = 3/54 (5%)
Frame = -2
Query: 332 EQVVDVKKKIETVLGVT---AAEQLLIHKGKVLKDETTVEANNVSEKSIIGVMK 180
+ V DVKK IETV+GVT AAEQ+LIHKGKVLKDETT+ ANNVSEKS+IGV+K
Sbjct: 21 DSVGDVKKNIETVMGVTAYPAAEQVLIHKGKVLKDETTLAANNVSEKSVIGVIK 74
>gi|193872586|gb|ACF23021.1| ST6-40 [Eutrema halophilum]
Length = 169
Score = 68 bits (164), Expect = 6e-010
Identities = 36/42 (85%)
Frame = -3
Query: 478 MAMTVAASSSVAVMIPRVPAVSARLSAVPYLPPLPPLSISCS 353
MAMTVAASSSVAVMI RVPAVSAR SAVPYLPPLPP S S
Sbjct: 1 MAMTVAASSSVAVMITRVPAVSARCSAVPYLPPLPPRSFGRS 42
>gi|297814221|ref|XP_002874994.1| hypothetical protein ARALYDRAFT_912116
[Arabidopsis lyrata subsp. lyrata]
Length = 167
Score = 62 bits (150), Expect = 3e-008
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = -3
Query: 478 MAMTVAASSSVAVMIPRVPAVSARLSAVPYLPPLPPLSISCS 353
MA++VAASSSV V++PRVPA+S R SAVPYLPPLPP S S
Sbjct: 1 MAISVAASSSVTVIVPRVPAISTRCSAVPYLPPLPPRSFGRS 42
>gi|297832888|ref|XP_002884326.1| hypothetical protein ARALYDRAFT_477488
[Arabidopsis lyrata subsp. lyrata]
Length = 417
Score = 62 bits (148), Expect = 4e-008
Identities = 33/53 (62%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
Frame = -2
Query: 332 EQVVDVKKKIETVLGV---TAAEQLLIHKGKVLKDETTVEANNVSEKSIIGVM 183
+ V DVKK IETV G AA+Q+LIH+GKVLKDETT+E N V+E S I VM
Sbjct: 21 DSVADVKKNIETVQGADVYPAAKQMLIHQGKVLKDETTIEENKVAENSFIVVM 73
>gi|15232924|ref|NP_186903.1| putative DNA repair protein RAD23-3 [Arabidopsis
thaliana]
Length = 419
Score = 61 bits (147), Expect = 6e-008
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 3/53 (5%)
Frame = -2
Query: 332 EQVVDVKKKIETVLGV---TAAEQLLIHKGKVLKDETTVEANNVSEKSIIGVM 183
+ VVDVKK IE+V G AA+Q+LIH+GKVLKDETT+E N V+E S I +M
Sbjct: 21 DSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEENKVAENSFIVIM 73
>gi|42572233|ref|NP_974211.1| putative DNA repair protein RAD23-3 [Arabidopsis
thaliana]
Length = 299
Score = 61 bits (147), Expect = 6e-008
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 3/53 (5%)
Frame = -2
Query: 332 EQVVDVKKKIETVLGV---TAAEQLLIHKGKVLKDETTVEANNVSEKSIIGVM 183
+ VVDVKK IE+V G AA+Q+LIH+GKVLKDETT+E N V+E S I +M
Sbjct: 21 DSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEENKVAENSFIVIM 73
>gi|334185033|ref|NP_001189793.1| putative DNA repair protein RAD23-3
[Arabidopsis thaliana]
Length = 418
Score = 61 bits (147), Expect = 6e-008
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 3/53 (5%)
Frame = -2
Query: 332 EQVVDVKKKIETVLGV---TAAEQLLIHKGKVLKDETTVEANNVSEKSIIGVM 183
+ VVDVKK IE+V G AA+Q+LIH+GKVLKDETT+E N V+E S I +M
Sbjct: 21 DSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEENKVAENSFIVIM 73
>gi|90657579|gb|ABD96879.1| hypothetical protein [Cleome spinosa]
Length = 383
Score = 60 bits (144), Expect = 1e-007
Identities = 31/53 (58%), Positives = 40/53 (75%), Gaps = 3/53 (5%)
Frame = -2
Query: 332 EQVVDVKKKIETVLGV---TAAEQLLIHKGKVLKDETTVEANNVSEKSIIGVM 183
+ V DVKK IETV G +A+Q+LIH+GKVL+DETT+E N V+EKS I +M
Sbjct: 21 DTVADVKKNIETVQGADVYPSAQQMLIHQGKVLRDETTMEENKVAEKSFIVIM 73
>gi|15240922|ref|NP_198663.1| putative DNA repair protein RAD23-4 [Arabidopsis
thaliana]
Length = 378
Score = 59 bits (141), Expect = 3e-007
Identities = 32/52 (61%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Frame = -2
Query: 332 EQVVDVKKKIETVLGV--TAAEQLLIHKGKVLKDETTVEANNVSEKSIIGVM 183
++V DVK IETV G AA+Q+LIH+GKVLKDETT+E NNV E S I +M
Sbjct: 21 DKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEENNVVENSFIVIM 72
>gi|30409730|dbj|BAC76395.1| RAD23-like protein [Arabidopsis thaliana]
Length = 343
Score = 59 bits (141), Expect = 3e-007
Identities = 32/52 (61%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Frame = -2
Query: 332 EQVVDVKKKIETVLGV--TAAEQLLIHKGKVLKDETTVEANNVSEKSIIGVM 183
++V DVK IETV G AA+Q+LIH+GKVLKDETT+E NNV E S I +M
Sbjct: 21 DKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEENNVVENSFIVIM 72
>gi|14335004|gb|AAK59766.1| unknown protein [Arabidopsis thaliana]
Length = 378
Score = 59 bits (141), Expect = 3e-007
Identities = 32/52 (61%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Frame = -2
Query: 332 EQVVDVKKKIETVLGV--TAAEQLLIHKGKVLKDETTVEANNVSEKSIIGVM 183
++V DVK IETV G AA+Q+LIH+GKVLKDETT+E NNV E S I +M
Sbjct: 21 DKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEENNVVENSFIVIM 72
>gi|145334669|ref|NP_001078680.1| putative DNA repair protein RAD23-4
[Arabidopsis thaliana]
Length = 332
Score = 59 bits (141), Expect = 3e-007
Identities = 32/52 (61%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Frame = -2
Query: 332 EQVVDVKKKIETVLGV--TAAEQLLIHKGKVLKDETTVEANNVSEKSIIGVM 183
++V DVK IETV G AA+Q+LIH+GKVLKDETT+E NNV E S I +M
Sbjct: 21 DKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEENNVVENSFIVIM 72
>gi|297805910|ref|XP_002870839.1| hypothetical protein ARALYDRAFT_494129
[Arabidopsis lyrata subsp. lyrata]
Length = 377
Score = 59 bits (141), Expect = 3e-007
Identities = 32/52 (61%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Frame = -2
Query: 332 EQVVDVKKKIETVLGV--TAAEQLLIHKGKVLKDETTVEANNVSEKSIIGVM 183
+ V DVKK IETV G A +Q+LIH+GKVLKDETT+E NNV E S I +M
Sbjct: 21 DTVSDVKKAIETVKGAEYPAVKQMLIHQGKVLKDETTLEENNVVENSFIVIM 72
>gi|90657662|gb|ABD96960.1| hypothetical protein [Cleome spinosa]
Length = 435
Score = 58 bits (138), Expect = 6e-007
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Frame = -2
Query: 332 EQVVDVKKKIETVLG---VTAAEQLLIHKGKVLKDETTVEANNVSEKSIIGVM 183
+ V DVKK IETV AA+Q+LIH+GKVLKDETT+E N V+E S I +M
Sbjct: 21 DTVADVKKNIETVQSPDVYPAAQQMLIHQGKVLKDETTMEENKVAENSFIVIM 73
>gi|18411555|ref|NP_567210.1| uncharacterized protein [Arabidopsis thaliana]
Length = 164
Score = 57 bits (135), Expect = 1e-006
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = -3
Query: 478 MAMTVAASSSVAVMIPRVPAVSARLSAVPYLPP 380
MA++VAASSS+AVM+PRVPAVS R SAVPYLPP
Sbjct: 1 MAISVAASSSMAVMVPRVPAVSTRCSAVPYLPP 33
>gi|687677|gb|AAB00107.1| unknown [Arabidopsis thaliana]
Length = 164
Score = 57 bits (135), Expect = 1e-006
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = -3
Query: 478 MAMTVAASSSVAVMIPRVPAVSARLSAVPYLPP 380
MA++VAASSS+AVM+PRVPAVS R SAVPYLPP
Sbjct: 1 MAISVAASSSMAVMVPRVPAVSTRCSAVPYLPP 33
>gi|186511415|ref|NP_001118909.1| uncharacterized protein [Arabidopsis
thaliana]
Length = 125
Score = 57 bits (135), Expect = 1e-006
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = -3
Query: 478 MAMTVAASSSVAVMIPRVPAVSARLSAVPYLPP 380
MA++VAASSS+AVM+PRVPAVS R SAVPYLPP
Sbjct: 1 MAISVAASSSMAVMVPRVPAVSTRCSAVPYLPP 33
>gi|5640111|emb|CAB51544.1| RAD23 protein [Solanum lycopersicum var.
cerasiforme]
Length = 389
Score = 56 bits (134), Expect = 2e-006
Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Frame = -2
Query: 332 EQVVDVKKKIETVLG---VTAAEQLLIHKGKVLKDETTVEANNVSEKSIIGVM 183
+ V DVKK IE+V G AA+Q+LIH+GKVLKD TT+E N V+E S + +M
Sbjct: 21 DSVADVKKNIESVQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIM 73
>gi|217069976|gb|ACJ83348.1| unknown [Medicago truncatula]
Length = 159
Score = 55 bits (131), Expect = 4e-006
Identities = 30/48 (62%), Positives = 36/48 (75%), Gaps = 3/48 (6%)
Frame = -2
Query: 317 VKKKIETVLGV---TAAEQLLIHKGKVLKDETTVEANNVSEKSIIGVM 183
VKK IETV GV AA+Q+LIH+GKVLKD TT+E N V+E S I +M
Sbjct: 26 VKKNIETVQGVDVYPAAQQMLIHQGKVLKDGTTLEENKVAENSFIVIM 73
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,027,124,687,929
Number of Sequences: 15229318
Number of Extensions: 5027124687929
Number of Successful Extensions: 1168073280
Number of sequences better than 0.0: 0
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