BLASTX 7.6.2
Query= UN45879 /QuerySize=782
(781 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15240962|ref|NP_198678.1| MADS-box protein AGL73 [Arabidopsis... 72 8e-011
gi|42568417|ref|NP_199753.3| MADS-box transcription factor famil... 69 7e-010
gi|9759425|dbj|BAB09912.1| MADS-box protein-like [Arabidopsis th... 69 7e-010
gi|116831593|gb|ABK28749.1| unknown [Arabidopsis thaliana] 69 7e-010
gi|15239907|ref|NP_199760.1| protein agamous-like 83 [Arabidopsi... 62 1e-007
gi|297806447|ref|XP_002871107.1| hypothetical protein ARALYDRAFT... 60 2e-007
gi|63055532|gb|AAY29120.1| cement precursor protein 3B variant 1... 59 5e-007
>gi|15240962|ref|NP_198678.1| MADS-box protein AGL73 [Arabidopsis thaliana]
Length = 349
Score = 72 bits (175), Expect = 8e-011
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Frame = -1
Query: 772 NTKATREDLGICMARKDLGLGFWWDDDKLVNSNDSEELMEAMESMKVLQSHLKRLEDRTL 593
+ K TRED+GIC+ RK+LGLGFWW+D+ LV S + +E+ EA+ SM L S+LK L
Sbjct: 88 DNKETREDVGICLTRKNLGLGFWWNDESLVRSENPQEISEAIGSMWTLLSNLKELR---- 143
Query: 592 TTTTTTVDENMVEISPESDEWSEMDLFKLLQDCDCDCDDVPPLHDVVSNTEEDHNVSEKT 413
D ++ + +SD D + Q C L+D+ + ++ +
Sbjct: 144 ADEACVNDHKDLKKNEKSDVHGTQDQTLIFQSASAVCCIPENLNDITQEPNQTLDIQSSS 203
>gi|42568417|ref|NP_199753.3| MADS-box transcription factor family protein
[Arabidopsis thaliana]
Length = 334
Score = 69 bits (167), Expect = 7e-010
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Frame = -1
Query: 772 NTKATREDLGICMARKDLGLGFWWDDDKLVNSNDSEELMEAMESMKVLQSHLKRLE-DRT 596
+ K TRED+GIC+ R +LGLGFWW+D+ L S + +E+ EA++SM+ L +LK L D
Sbjct: 88 DNKETREDVGICLTRNNLGLGFWWNDESLARSENPQEISEAIDSMRTLLRNLKELRADEA 147
Query: 595 LTTTTTTV-DENMVEISPESDEWSE---MDLFKLLQDCDCDCDDVPPLHDVVSNTEEDHN 428
L V D ++ + + D S+ D +LQ C L+++ + N
Sbjct: 148 LACNQAFVNDREDLKNNDKCDFVSDHETHDQTLILQSASPICCIPENLNEITQEPNQTLN 207
Query: 427 VSEKT 413
+ T
Sbjct: 208 IQSST 212
>gi|9759425|dbj|BAB09912.1| MADS-box protein-like [Arabidopsis thaliana]
Length = 368
Score = 69 bits (167), Expect = 7e-010
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Frame = -1
Query: 772 NTKATREDLGICMARKDLGLGFWWDDDKLVNSNDSEELMEAMESMKVLQSHLKRLE-DRT 596
+ K TRED+GIC+ R +LGLGFWW+D+ L S + +E+ EA++SM+ L +LK L D
Sbjct: 88 DNKETREDVGICLTRNNLGLGFWWNDESLARSENPQEISEAIDSMRTLLRNLKELRADEA 147
Query: 595 LTTTTTTV-DENMVEISPESDEWSE---MDLFKLLQDCDCDCDDVPPLHDVVSNTEEDHN 428
L V D ++ + + D S+ D +LQ C L+++ + N
Sbjct: 148 LACNQAFVNDREDLKNNDKCDFVSDHETHDQTLILQSASPICCIPENLNEITQEPNQTLN 207
Query: 427 VSEKT 413
+ T
Sbjct: 208 IQSST 212
>gi|116831593|gb|ABK28749.1| unknown [Arabidopsis thaliana]
Length = 335
Score = 69 bits (167), Expect = 7e-010
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Frame = -1
Query: 772 NTKATREDLGICMARKDLGLGFWWDDDKLVNSNDSEELMEAMESMKVLQSHLKRLE-DRT 596
+ K TRED+GIC+ R +LGLGFWW+D+ L S + +E+ EA++SM+ L +LK L D
Sbjct: 88 DNKETREDVGICLTRNNLGLGFWWNDESLARSENPQEISEAIDSMRTLLRNLKELRADEA 147
Query: 595 LTTTTTTV-DENMVEISPESDEWSE---MDLFKLLQDCDCDCDDVPPLHDVVSNTEEDHN 428
L V D ++ + + D S+ D +LQ C L+++ + N
Sbjct: 148 LACNQAFVNDREDLKNNDKCDFVSDHETHDQTLILQSASPICCIPENLNEITQEPNQTLN 207
Query: 427 VSEKT 413
+ T
Sbjct: 208 IQSST 212
>gi|15239907|ref|NP_199760.1| protein agamous-like 83 [Arabidopsis thaliana]
Length = 285
Score = 62 bits (148), Expect = 1e-007
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = -1
Query: 775 DNTKATREDLGICMARKDLGLGFWWDDDKLVNSNDSEELMEAMESMKVLQSHLKRL 608
++TK RED+ IC++R +LGLGFWW+++ L S + +E+ +A+ SM L S+LK L
Sbjct: 127 EDTKEMREDVAICLSRTNLGLGFWWNNESLNKSENPQEISDAINSMLTLLSNLKEL 182
>gi|297806447|ref|XP_002871107.1| hypothetical protein ARALYDRAFT_487246
[Arabidopsis lyrata subsp. lyrata]
Length = 289
Score = 60 bits (145), Expect = 2e-007
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Frame = -1
Query: 730 RKDLGLGFWWDDDKLVNSNDSEELMEAMESMKVLQSHLKRLEDRTLTTTTTTVD---ENM 560
R+ LGLGFWW+D+KL S D EEL +AM+SM + LK L L VD + +
Sbjct: 37 REGLGLGFWWEDEKLAKSEDPEELRDAMDSMSKMLKDLKELRFNALENRRDCVDVKKKGV 96
Query: 559 VEISPESDEWSEMDLFKLLQDCDCDCDDVP-PLHDVVSNTEEDH-NVSEKTCNNNNFVSL 386
+ + + S L C DDV + NTEE VS + NNN+F
Sbjct: 97 LHGTHQKQTLSPQSFSASL----CILDDVSVNFNGFKKNTEEQTLAVSNNSSNNNDF--- 149
Query: 385 PELDE 371
+LDE
Sbjct: 150 -DLDE 153
>gi|63055532|gb|AAY29120.1| cement precursor protein 3B variant 1 [Phragmatopoma
californica]
Length = 341
Score = 59 bits (142), Expect = 5e-007
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 1/205 (0%)
Frame = +3
Query: 141 YSSLRSSSPDAKTVSQSIFIASSSRLPTTASGNDTKLLQVFSDTL*SSSSWSVLPKTGGS 320
YSS SSS + + S S + +SSS +++S + + S + SSSS S + S
Sbjct: 127 YSSSSSSSSSSYSSSSSSYSSSSSSSYSSSSSSSSSSYSSSSSSYSSSSSSSSSYSSSSS 186
Query: 321 GT*SQSSSS*LRTISLHSSNSGNDTKLLLLQVFSDTL*SSSVLLTTSCSGGTSSQSQSQS 500
+ S SSSS + S SS+ + + +S + SSS ++S S +SS S S S
Sbjct: 187 SSSSYSSSS-SSSYSSSSSSYSSSSSSSSSSSYSSSSSSSSSSYSSSSSSYSSSSSSSSS 245
Query: 501 WRSLKRSISLHSSDSGEISTMFSSTVVVVVVRVRSSNRLRWLCSTFIDSIASISSSESFE 680
+ S S S +SS S S+ +SS+ SS+ + S+ +S SSS S
Sbjct: 246 YSSSSSSSSSYSSSSSSSSSSYSSSSSSSSSSSYSSSSSSYSSSSSSSYSSSSSSSSSSY 305
Query: 681 LTSLSSSHQNPNPRSLRAIHIPRSS 755
+S SSS+ + + S + + SS
Sbjct: 306 SSSSSSSYSSSSSSSSSSSYSSSSS 330
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,027,124,687,929
Number of Sequences: 15229318
Number of Extensions: 5027124687929
Number of Successful Extensions: 1168073280
Number of sequences better than 0.0: 0
|
