BLASTX 7.6.2
Query= UN45910 /QuerySize=428
(427 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15233167|ref|NP_191721.1| exosome complex component RRP41 [Ar... 66 1e-009
gi|297821020|ref|XP_002878393.1| hypothetical protein ARALYDRAFT... 66 1e-009
gi|225454436|ref|XP_002280302.1| PREDICTED: hypothetical protein... 55 2e-006
gi|224130470|ref|XP_002320845.1| predicted protein [Populus tric... 55 2e-006
gi|255579328|ref|XP_002530509.1| Exosome complex exonuclease RRP... 55 2e-006
>gi|15233167|ref|NP_191721.1| exosome complex component RRP41 [Arabidopsis
thaliana]
Length = 241
Score = 66 bits (159), Expect = 1e-009
Identities = 31/33 (93%), Positives = 33/33 (100%)
Frame = -3
Query: 206 MDAKLPMETFETVFALASEGCKAIAERVREVIQ 108
MDAKLPMETFETVFALASEGCKAIAER+REV+Q
Sbjct: 197 MDAKLPMETFETVFALASEGCKAIAERIREVLQ 229
Score = 55 bits (132), Expect = 2e-006
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -1
Query: 361 LIFNYVEDSAGGADVTVGILPKLDKVTLLQV 269
L NYVEDSAGGADVTVGILPKLDKV+LLQ+
Sbjct: 167 LDLNYVEDSAGGADVTVGILPKLDKVSLLQM 197
>gi|297821020|ref|XP_002878393.1| hypothetical protein ARALYDRAFT_486650
[Arabidopsis lyrata subsp. lyrata]
Length = 241
Score = 66 bits (159), Expect = 1e-009
Identities = 31/33 (93%), Positives = 33/33 (100%)
Frame = -3
Query: 206 MDAKLPMETFETVFALASEGCKAIAERVREVIQ 108
MDAKLPMETFETVFALASEGCKAIAER+REV+Q
Sbjct: 197 MDAKLPMETFETVFALASEGCKAIAERIREVLQ 229
Score = 57 bits (136), Expect = 6e-007
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = -1
Query: 361 LIFNYVEDSAGGADVTVGILPKLDKVTLLQV 269
L NYVEDSAGGADVTVGILPKLDKVTLLQ+
Sbjct: 167 LDLNYVEDSAGGADVTVGILPKLDKVTLLQM 197
>gi|225454436|ref|XP_002280302.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 241
Score = 55 bits (131), Expect = 2e-006
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = -1
Query: 361 LIFNYVEDSAGGADVTVGILPKLDKVTLLQV 269
L NYVEDSAGG DVTVGILPKLDKVTLLQ+
Sbjct: 167 LDLNYVEDSAGGPDVTVGILPKLDKVTLLQM 197
>gi|224130470|ref|XP_002320845.1| predicted protein [Populus trichocarpa]
Length = 241
Score = 55 bits (131), Expect = 2e-006
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = -1
Query: 361 LIFNYVEDSAGGADVTVGILPKLDKVTLLQV 269
L NYVEDSAGG DVTVGILPKLDKVTLLQ+
Sbjct: 167 LDLNYVEDSAGGPDVTVGILPKLDKVTLLQM 197
>gi|255579328|ref|XP_002530509.1| Exosome complex exonuclease RRP41, putative
[Ricinus communis]
Length = 241
Score = 55 bits (131), Expect = 2e-006
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = -1
Query: 361 LIFNYVEDSAGGADVTVGILPKLDKVTLLQV 269
L NYVEDSAGG DVTVGILPKLDKVTLLQ+
Sbjct: 167 LDLNYVEDSAGGPDVTVGILPKLDKVTLLQM 197
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,027,124,687,929
Number of Sequences: 15229318
Number of Extensions: 5027124687929
Number of Successful Extensions: 1168073280
Number of sequences better than 0.0: 0
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