BLASTX 7.6.2
Query= UN45984 /QuerySize=496
(495 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15232179|ref|NP_191540.1| U6 snRNA-associated Sm-like protein... 164 3e-039
gi|21554327|gb|AAM63434.1| U6 snRNA-associated Sm-like protein [... 163 7e-039
gi|297817284|ref|XP_002876525.1| hypothetical protein ARALYDRAFT... 163 7e-039
gi|255587821|ref|XP_002534408.1| small nuclear ribonucleoprotein... 161 3e-038
gi|224098796|ref|XP_002311269.1| predicted protein [Populus tric... 160 4e-038
gi|224112373|ref|XP_002316168.1| predicted protein [Populus tric... 159 7e-038
gi|225434160|ref|XP_002278412.1| PREDICTED: hypothetical protein... 159 1e-037
gi|255627589|gb|ACU14139.1| unknown [Glycine max] 158 2e-037
gi|297824373|ref|XP_002880069.1| hypothetical protein ARALYDRAFT... 158 2e-037
gi|15224366|ref|NP_181909.1| U6 snRNA-associated Sm-like protein... 156 1e-036
gi|326504448|dbj|BAJ91056.1| predicted protein [Hordeum vulgare ... 156 1e-036
gi|212722680|ref|NP_001131392.1| hypothetical protein LOC1001927... 154 3e-036
gi|242075544|ref|XP_002447708.1| hypothetical protein SORBIDRAFT... 154 3e-036
gi|222424888|dbj|BAH20395.1| AT2G43810 [Arabidopsis thaliana] 154 4e-036
gi|48716974|dbj|BAD23667.1| putative Sm protein F [Oryza sativa ... 152 2e-035
gi|115446301|ref|NP_001046930.1| Os02g0510100 [Oryza sativa Japo... 152 2e-035
gi|218190824|gb|EEC73251.1| hypothetical protein OsI_07364 [Oryz... 152 2e-035
gi|168005297|ref|XP_001755347.1| predicted protein [Physcomitrel... 150 4e-035
gi|116782342|gb|ABK22473.1| unknown [Picea sitchensis] 150 6e-035
gi|116792892|gb|ABK26542.1| unknown [Picea sitchensis] 150 6e-035
>gi|15232179|ref|NP_191540.1| U6 snRNA-associated Sm-like protein LSm6
[Arabidopsis thaliana]
Length = 91
Score = 164 bits (414), Expect = 3e-039
Identities = 80/87 (91%), Positives = 82/87 (94%)
Frame = +2
Query: 80 DNKVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLK 259
+ KVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRG L CLDGYMNIAMEQTEEYVNGQLK
Sbjct: 5 EEKVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGTLTCLDGYMNIAMEQTEEYVNGQLK 64
Query: 260 NKYGDAFIRGNNVLYISTVNTPLADGA 340
NKYGDAFIRGNNVLYISTVN +ADGA
Sbjct: 65 NKYGDAFIRGNNVLYISTVNMTVADGA 91
>gi|21554327|gb|AAM63434.1| U6 snRNA-associated Sm-like protein [Arabidopsis
thaliana]
Length = 91
Score = 163 bits (411), Expect = 7e-039
Identities = 79/85 (92%), Positives = 81/85 (95%)
Frame = +2
Query: 86 KVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNK 265
KVSGTTKTPADFLKSIRGRPV+VKLNSGVDYRG L CLDGYMNIAMEQTEEYVNGQLKNK
Sbjct: 7 KVSGTTKTPADFLKSIRGRPVIVKLNSGVDYRGTLTCLDGYMNIAMEQTEEYVNGQLKNK 66
Query: 266 YGDAFIRGNNVLYISTVNTPLADGA 340
YGDAFIRGNNVLYISTVN +ADGA
Sbjct: 67 YGDAFIRGNNVLYISTVNMTVADGA 91
>gi|297817284|ref|XP_002876525.1| hypothetical protein ARALYDRAFT_486445
[Arabidopsis lyrata subsp. lyrata]
Length = 91
Score = 163 bits (411), Expect = 7e-039
Identities = 80/85 (94%), Positives = 81/85 (95%)
Frame = +2
Query: 86 KVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNK 265
KVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGIL CLDGYMNIAMEQTEEYVNGQLKNK
Sbjct: 7 KVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNGQLKNK 66
Query: 266 YGDAFIRGNNVLYISTVNTPLADGA 340
YGDAFIRGNNVLYISTV +ADGA
Sbjct: 67 YGDAFIRGNNVLYISTVKMTVADGA 91
>gi|255587821|ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative
[Ricinus communis]
Length = 91
Score = 161 bits (406), Expect = 3e-038
Identities = 80/88 (90%)
Frame = +2
Query: 77 GDNKVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 256
G K S TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL
Sbjct: 4 GGEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 63
Query: 257 KNKYGDAFIRGNNVLYISTVNTPLADGA 340
KNKYGDAFIRGNNVLYIST LADGA
Sbjct: 64 KNKYGDAFIRGNNVLYISTTKRTLADGA 91
>gi|224098796|ref|XP_002311269.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 160 bits (404), Expect = 4e-038
Identities = 80/88 (90%)
Frame = +2
Query: 77 GDNKVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 256
G K S TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL
Sbjct: 4 GGEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 63
Query: 257 KNKYGDAFIRGNNVLYISTVNTPLADGA 340
KNKYGDAFIRGNNVLYIST LADGA
Sbjct: 64 KNKYGDAFIRGNNVLYISTSKRTLADGA 91
>gi|224112373|ref|XP_002316168.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 159 bits (402), Expect = 7e-038
Identities = 80/88 (90%)
Frame = +2
Query: 77 GDNKVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 256
G K S TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL
Sbjct: 4 GGEKGSTTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 63
Query: 257 KNKYGDAFIRGNNVLYISTVNTPLADGA 340
KNKYGDAFIRGNNVLYIST LADGA
Sbjct: 64 KNKYGDAFIRGNNVLYISTSKRTLADGA 91
>gi|225434160|ref|XP_002278412.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 91
Score = 159 bits (400), Expect = 1e-037
Identities = 79/88 (89%), Positives = 80/88 (90%)
Frame = +2
Query: 77 GDNKVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 256
G K S TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL
Sbjct: 4 GGEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 63
Query: 257 KNKYGDAFIRGNNVLYISTVNTPLADGA 340
KNKYGDAFIRGNNVLYIST LA+GA
Sbjct: 64 KNKYGDAFIRGNNVLYISTSKRTLAEGA 91
>gi|255627589|gb|ACU14139.1| unknown [Glycine max]
Length = 91
Score = 158 bits (399), Expect = 2e-037
Identities = 78/83 (93%), Positives = 79/83 (95%)
Frame = +2
Query: 92 SGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYG 271
SGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYG
Sbjct: 9 SGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYG 68
Query: 272 DAFIRGNNVLYISTVNTPLADGA 340
DAFIRGNNVLYIST LA+GA
Sbjct: 69 DAFIRGNNVLYISTSKRTLAEGA 91
>gi|297824373|ref|XP_002880069.1| hypothetical protein ARALYDRAFT_903785
[Arabidopsis lyrata subsp. lyrata]
Length = 91
Score = 158 bits (398), Expect = 2e-037
Identities = 76/85 (89%), Positives = 79/85 (92%)
Frame = +2
Query: 86 KVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNK 265
K SGTTKTPADFLKSIRG+PVVVKLNSGVDYRGIL CLDGYMNIAMEQTEEYVNGQLKNK
Sbjct: 7 KASGTTKTPADFLKSIRGKPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNGQLKNK 66
Query: 266 YGDAFIRGNNVLYISTVNTPLADGA 340
YGDAF+RGNNVLYIST L+DGA
Sbjct: 67 YGDAFVRGNNVLYISTTKGTLSDGA 91
>gi|15224366|ref|NP_181909.1| U6 snRNA-associated Sm-like protein LSm6
[Arabidopsis thaliana]
Length = 91
Score = 156 bits (392), Expect = 1e-036
Identities = 75/85 (88%), Positives = 78/85 (91%)
Frame = +2
Query: 86 KVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNK 265
K SGTTKTPADFLKSIRG+PVVVKLNSGVDYRGIL CLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 7 KASGTTKTPADFLKSIRGKPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNGQLKNT 66
Query: 266 YGDAFIRGNNVLYISTVNTPLADGA 340
YGDAF+RGNNVLYIST L+DGA
Sbjct: 67 YGDAFVRGNNVLYISTTKGTLSDGA 91
>gi|326504448|dbj|BAJ91056.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 99
Score = 156 bits (392), Expect = 1e-036
Identities = 76/88 (86%), Positives = 77/88 (87%)
Frame = +2
Query: 77 GDNKVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 256
G G KTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL
Sbjct: 12 GGGGAGGPVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 71
Query: 257 KNKYGDAFIRGNNVLYISTVNTPLADGA 340
KNKYGDAFIRGNNVLYIST PL DGA
Sbjct: 72 KNKYGDAFIRGNNVLYISTSKRPLTDGA 99
>gi|212722680|ref|NP_001131392.1| hypothetical protein LOC100192719 [Zea mays]
Length = 95
Score = 154 bits (388), Expect = 3e-036
Identities = 75/82 (91%), Positives = 76/82 (92%)
Frame = +2
Query: 95 GTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 274
G KTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD
Sbjct: 14 GAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 73
Query: 275 AFIRGNNVLYISTVNTPLADGA 340
AFIRGNNVLYIST LADGA
Sbjct: 74 AFIRGNNVLYISTTKRTLADGA 95
>gi|242075544|ref|XP_002447708.1| hypothetical protein SORBIDRAFT_06g013920
[Sorghum bicolor]
Length = 97
Score = 154 bits (388), Expect = 3e-036
Identities = 76/90 (84%), Positives = 77/90 (85%)
Frame = +2
Query: 71 KMGDNKVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 250
K G G KTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG
Sbjct: 8 KPGSGSGGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 67
Query: 251 QLKNKYGDAFIRGNNVLYISTVNTPLADGA 340
QLKNKYGDAFIRGNNVLYIST L DGA
Sbjct: 68 QLKNKYGDAFIRGNNVLYISTSKRTLTDGA 97
>gi|222424888|dbj|BAH20395.1| AT2G43810 [Arabidopsis thaliana]
Length = 91
Score = 154 bits (387), Expect = 4e-036
Identities = 74/85 (87%), Positives = 77/85 (90%)
Frame = +2
Query: 86 KVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNK 265
K SGTTKTPADFLKSIRG+PVVVKLNSGVDYRGIL CLDGYMNIAMEQ EEYVNGQLKN
Sbjct: 7 KASGTTKTPADFLKSIRGKPVVVKLNSGVDYRGILTCLDGYMNIAMEQAEEYVNGQLKNT 66
Query: 266 YGDAFIRGNNVLYISTVNTPLADGA 340
YGDAF+RGNNVLYIST L+DGA
Sbjct: 67 YGDAFVRGNNVLYISTTKGTLSDGA 91
>gi|48716974|dbj|BAD23667.1| putative Sm protein F [Oryza sativa Japonica
Group]
Length = 101
Score = 152 bits (382), Expect = 2e-035
Identities = 74/82 (90%), Positives = 75/82 (91%)
Frame = +2
Query: 95 GTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 274
G KTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD
Sbjct: 20 GAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 79
Query: 275 AFIRGNNVLYISTVNTPLADGA 340
AFIRGNNVLYIST L DGA
Sbjct: 80 AFIRGNNVLYISTSKRTLTDGA 101
>gi|115446301|ref|NP_001046930.1| Os02g0510100 [Oryza sativa Japonica Group]
Length = 96
Score = 152 bits (382), Expect = 2e-035
Identities = 74/82 (90%), Positives = 75/82 (91%)
Frame = +2
Query: 95 GTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 274
G KTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD
Sbjct: 15 GAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 74
Query: 275 AFIRGNNVLYISTVNTPLADGA 340
AFIRGNNVLYIST L DGA
Sbjct: 75 AFIRGNNVLYISTSKRTLTDGA 96
>gi|218190824|gb|EEC73251.1| hypothetical protein OsI_07364 [Oryza sativa Indica
Group]
Length = 97
Score = 152 bits (382), Expect = 2e-035
Identities = 74/82 (90%), Positives = 75/82 (91%)
Frame = +2
Query: 95 GTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 274
G KTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD
Sbjct: 16 GAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 75
Query: 275 AFIRGNNVLYISTVNTPLADGA 340
AFIRGNNVLYIST L DGA
Sbjct: 76 AFIRGNNVLYISTSKRTLTDGA 97
>gi|168005297|ref|XP_001755347.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 91
Score = 150 bits (378), Expect = 4e-035
Identities = 72/81 (88%), Positives = 75/81 (92%)
Frame = +2
Query: 92 SGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYG 271
+G+ KTPADFLKSIRGRPVVVKLNSGVDYRG+LACLDGYMNIAMEQTEEYVNGQLKNKYG
Sbjct: 11 TGSAKTPADFLKSIRGRPVVVKLNSGVDYRGVLACLDGYMNIAMEQTEEYVNGQLKNKYG 70
Query: 272 DAFIRGNNVLYISTVNTPLAD 334
DAFIRGNNVLYIST L D
Sbjct: 71 DAFIRGNNVLYISTTKRTLGD 91
>gi|116782342|gb|ABK22473.1| unknown [Picea sitchensis]
Length = 91
Score = 150 bits (377), Expect = 6e-035
Identities = 74/88 (84%), Positives = 77/88 (87%)
Frame = +2
Query: 77 GDNKVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 256
G + + KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL
Sbjct: 4 GGSGGGASAKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 63
Query: 257 KNKYGDAFIRGNNVLYISTVNTPLADGA 340
KNKYGDAFIRGNNVLYIST L +GA
Sbjct: 64 KNKYGDAFIRGNNVLYISTSKRSLGEGA 91
>gi|116792892|gb|ABK26542.1| unknown [Picea sitchensis]
Length = 91
Score = 150 bits (377), Expect = 6e-035
Identities = 76/89 (85%), Positives = 78/89 (87%), Gaps = 1/89 (1%)
Frame = +2
Query: 77 GDNKVSGTT-KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQ 253
G GT+ KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQ
Sbjct: 3 GGGSGGGTSAKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQ 62
Query: 254 LKNKYGDAFIRGNNVLYISTVNTPLADGA 340
LKNKYGDAFIRGNNVLYIST L +GA
Sbjct: 63 LKNKYGDAFIRGNNVLYISTSKRTLGEGA 91
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,027,124,687,929
Number of Sequences: 15229318
Number of Extensions: 5027124687929
Number of Successful Extensions: 1168073280
Number of sequences better than 0.0: 0
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