BLASTX 7.6.2
Query= UN46031 /QuerySize=879
(878 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G36800.1 | Symbols: RCE1 | RCE1 (RUB1 CONJUGAT... 94 8e-020
TAIR9_protein||AT4G36800.2 | Symbols: RCE1 | RCE1 (RUB1 CONJUGAT... 94 8e-020
TAIR9_protein||AT2G18600.1 | Symbols: | RUB1-conjugating enzyme... 86 2e-017
TAIR9_protein||AT1G05350.1 | Symbols: | thiF family protein | c... 57 1e-008
>TAIR9_protein||AT4G36800.1 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1);
NEDD8 ligase/ small conjugating protein ligase | chr4:17341237-17342148
REVERSE
Length = 185
Score = 94 bits (233), Expect = 8e-020
Identities = 48/61 (78%), Positives = 52/61 (85%), Gaps = 1/61 (1%)
Frame = +1
Query: 292 ELMNSSRGRGASVKKPSAGELRLQKDISELNLRSSCTISFPNGKDDLMNCRDSIKPDDGY 471
+ N++RG GASVKK SAGELRL KDISELNL SSC+ISFPNGKDDLMN SIKPDDGY
Sbjct: 14 QAQNATRG-GASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLMNFEVSIKPDDGY 72
Query: 472 Y 474
Y
Sbjct: 73 Y 73
>TAIR9_protein||AT4G36800.2 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1);
NEDD8 ligase/ small conjugating protein ligase | chr4:17341237-17342148
REVERSE
Length = 185
Score = 94 bits (233), Expect = 8e-020
Identities = 48/61 (78%), Positives = 52/61 (85%), Gaps = 1/61 (1%)
Frame = +1
Query: 292 ELMNSSRGRGASVKKPSAGELRLQKDISELNLRSSCTISFPNGKDDLMNCRDSIKPDDGY 471
+ N++RG GASVKK SAGELRL KDISELNL SSC+ISFPNGKDDLMN SIKPDDGY
Sbjct: 14 QAQNATRG-GASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLMNFEVSIKPDDGY 72
Query: 472 Y 474
Y
Sbjct: 73 Y 73
>TAIR9_protein||AT2G18600.1 | Symbols: | RUB1-conjugating enzyme, putative |
chr2:8073337-8074565 REVERSE
Length = 186
Score = 86 bits (212), Expect = 2e-017
Identities = 45/62 (72%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Frame = +1
Query: 292 ELMNSSRGRGAS-VKKPSAGELRLQKDISELNLRSSCTISFPNGKDDLMNCRDSIKPDDG 468
E S+ GRGAS VKK SAGELRL KDISELNL SC ISFPNGK+DLMN +IKPD+G
Sbjct: 13 EESQSNNGRGASTVKKQSAGELRLHKDISELNLPKSCKISFPNGKNDLMNFEVTIKPDEG 72
Query: 469 YY 474
YY
Sbjct: 73 YY 74
>TAIR9_protein||AT1G05350.1 | Symbols: | thiF family protein |
chr1:1560891-1564005 REVERSE
Length = 446
Score = 57 bits (136), Expect = 1e-008
Identities = 29/39 (74%), Positives = 32/39 (82%), Gaps = 2/39 (5%)
Frame = +3
Query: 567 KEYMLVKPARDAA--AKMEAEAATAIDDGRLHDDNESNI 677
KEYML KP RDAA AKMEA+A+T ID+G LHDDNE NI
Sbjct: 340 KEYMLAKPERDAAAKAKMEADASTTIDEGPLHDDNEWNI 378
Score = 52 bits (123), Expect = 4e-007
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +3
Query: 477 GVVAGLLVENSLKFLLNFGEVSTYQVVNSVKEY 575
GVVAGLLV+NSLKFLLNFGEVS Y NS+K++
Sbjct: 286 GVVAGLLVQNSLKFLLNFGEVSPYLGYNSLKDF 318
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,125,547,072
Number of Sequences: 33410
Number of Extensions: 22125547072
Number of Successful Extensions: 696913121
Number of sequences better than 0.0: 0
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