BLASTX 7.6.2
Query= UN46095 /QuerySize=984
(983 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G53330.1 | Symbols: | FUNCTIONS IN: molecular... 298 4e-081
>TAIR9_protein||AT5G53330.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Ubiquitin-associated/translation elongation factor EF1B, N-terminal,
eukaryote (InterPro:IPR015940); Has 28 Blast hits to 28 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 2; Plants -
15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr5:21639236-21640716 FORWARD
Length = 222
Score = 298 bits (762), Expect = 4e-081
Identities = 163/225 (72%), Positives = 177/225 (78%), Gaps = 20/225 (8%)
Frame = +1
Query: 109 MDYDFRNKS-GPSYGRPMY--PSPSPSSMYTGPP-GYPKIG---GGQPFFPPPPERNPSF 267
MDYD+RNKS GPSY RPMY PS SPS P GYPKIG G P F PPERN SF
Sbjct: 1 MDYDYRNKSGGPSYPRPMYGPPSTSPSPSSNHPMYGYPKIGQQTGPGPQFFSPPERNSSF 60
Query: 268 QHNPS-SSGLGIKVTLKPDYLITPPPPLLPRVGDVPRSSFQFDFGLERKVLAEAEKDNPD 444
QHN S SSG+GI+V LKP+Y ITPPP LLPRVGD+ RSSFQFDFGLERKVLAEAEKDNPD
Sbjct: 61 QHNTSPSSGIGIRVNLKPEYRITPPPQLLPRVGDIHRSSFQFDFGLERKVLAEAEKDNPD 120
Query: 445 WSKFGSDHPPPPPPPANFSQPPPANFAQPPPAHSMGVDPVVMKY--AGLNREAVNIAVAN 618
WSKFGS++ PPA F +P P++ Q GVD VVMKY +GLNREAVNIAVAN
Sbjct: 121 WSKFGSEN-----PPAKFHEPSPSSVGQ-----MQGVDHVVMKYTASGLNREAVNIAVAN 170
Query: 619 YGDNPTKVHEFANGFSAIREMGFPTNAVADALFMFENDTEKALSH 753
YGDNPTKV EFANGF+AIREMGFPTNAVADALFMFENDT+KAL+H
Sbjct: 171 YGDNPTKVQEFANGFTAIREMGFPTNAVADALFMFENDTDKALAH 215
Score = 147 bits (369), Expect = 2e-035
Identities = 75/97 (77%), Positives = 82/97 (84%), Gaps = 5/97 (5%)
Frame = +1
Query: 499 SQPPPANFAQPPPA---HSMGVDPVVMKY--AGLNREAVNIAVANYGDNPTKVHEFANGF 663
S+ PPA F +P P+ GVD VVMKY +GLNREAVNIAVANYGDNPTKV EFANGF
Sbjct: 126 SENPPAKFHEPSPSSVGQMQGVDHVVMKYTASGLNREAVNIAVANYGDNPTKVQEFANGF 185
Query: 664 SAIREMGFPTNAVADALFMFENDTEKALSHLLHGSS* 774
+AIREMGFPTNAVADALFMFENDT+KAL+HLLHGSS*
Sbjct: 186 TAIREMGFPTNAVADALFMFENDTDKALAHLLHGSS* 222
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,219,304,975
Number of Sequences: 33410
Number of Extensions: 22219304975
Number of Successful Extensions: 702318539
Number of sequences better than 0.0: 0
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