BLASTX 7.6.2
Query= UN46211 /QuerySize=881
(880 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G29270.1 | Symbols: | ubiquitin-protein ligas... 169 3e-042
TAIR9_protein||AT3G29270.2 | Symbols: | ubiquitin-protein ligas... 169 3e-042
TAIR9_protein||AT1G69330.1 | Symbols: | zinc finger (C3HC4-type... 113 2e-025
TAIR9_protein||AT1G74370.1 | Symbols: | zinc finger (C3HC4-type... 92 3e-019
>TAIR9_protein||AT3G29270.1 | Symbols: | ubiquitin-protein ligase |
chr3:11235326-11236117 FORWARD
Length = 264
Score = 169 bits (426), Expect = 3e-042
Identities = 84/103 (81%), Positives = 89/103 (86%), Gaps = 9/103 (8%)
Frame = +1
Query: 46 RMWNLASSYLT---GPKHHETRRPVHDVHAHDECSDDESSSVGSSKEEEGLECPICWESF 216
RMWNLASSYLT GPK ++ RRP VHAH ECSDD+ SSVGS ++EGLECPICWESF
Sbjct: 8 RMWNLASSYLTGNIGPK-NDIRRP---VHAHAECSDDDVSSVGS--KDEGLECPICWESF 61
Query: 217 NIVENVPYVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLLPS 345
NIVENVPYVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPL S
Sbjct: 62 NIVENVPYVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFIS 104
Score = 144 bits (361), Expect = 1e-034
Identities = 74/91 (81%), Positives = 77/91 (84%)
Frame = +2
Query: 464 PPPPPTCLHHRHHRDNVQTSLRKSLVFFVQLTAKFPLVVTCLLIILYAVPICAAILVMYI 643
P P + HR RDN+QTSLRKSLVFFVQLTAKFPLVV LLIILYA+P AAIL MYI
Sbjct: 174 PEPSRSVNDHRIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYI 233
Query: 644 LVTLLLALPSFLILYFAYPCLDWLVREIVT* 736
LVTLLLALPSFLILYFAYPCLDWLVREIVT*
Sbjct: 234 LVTLLLALPSFLILYFAYPCLDWLVREIVT* 264
Score = 91 bits (224), Expect = 9e-019
Identities = 47/71 (66%), Positives = 51/71 (71%), Gaps = 11/71 (15%)
Frame = +2
Query: 332 LSFRLVFKGALRFPHKNYFLLWMVERMNGERRTS----QTD---DHQREPPPPPPPTCLH 490
LSFRLVF+G LRFPHKNYF+LWMVERMNGERR S QTD DH RE P P CLH
Sbjct: 111 LSFRLVFRGTLRFPHKNYFVLWMVERMNGERRNSPGGAQTDGNNDHTRETPSP----CLH 166
Query: 491 HRHHRDNVQTS 523
+RHHR + S
Sbjct: 167 NRHHRSQPEPS 177
>TAIR9_protein||AT3G29270.2 | Symbols: | ubiquitin-protein ligase |
chr3:11235326-11236117 FORWARD
Length = 264
Score = 169 bits (426), Expect = 3e-042
Identities = 84/103 (81%), Positives = 89/103 (86%), Gaps = 9/103 (8%)
Frame = +1
Query: 46 RMWNLASSYLT---GPKHHETRRPVHDVHAHDECSDDESSSVGSSKEEEGLECPICWESF 216
RMWNLASSYLT GPK ++ RRP VHAH ECSDD+ SSVGS ++EGLECPICWESF
Sbjct: 8 RMWNLASSYLTGNIGPK-NDIRRP---VHAHAECSDDDVSSVGS--KDEGLECPICWESF 61
Query: 217 NIVENVPYVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLLPS 345
NIVENVPYVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPL S
Sbjct: 62 NIVENVPYVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFIS 104
Score = 144 bits (361), Expect = 1e-034
Identities = 74/91 (81%), Positives = 77/91 (84%)
Frame = +2
Query: 464 PPPPPTCLHHRHHRDNVQTSLRKSLVFFVQLTAKFPLVVTCLLIILYAVPICAAILVMYI 643
P P + HR RDN+QTSLRKSLVFFVQLTAKFPLVV LLIILYA+P AAIL MYI
Sbjct: 174 PEPSRSVNDHRIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYI 233
Query: 644 LVTLLLALPSFLILYFAYPCLDWLVREIVT* 736
LVTLLLALPSFLILYFAYPCLDWLVREIVT*
Sbjct: 234 LVTLLLALPSFLILYFAYPCLDWLVREIVT* 264
Score = 91 bits (224), Expect = 9e-019
Identities = 47/71 (66%), Positives = 51/71 (71%), Gaps = 11/71 (15%)
Frame = +2
Query: 332 LSFRLVFKGALRFPHKNYFLLWMVERMNGERRTS----QTD---DHQREPPPPPPPTCLH 490
LSFRLVF+G LRFPHKNYF+LWMVERMNGERR S QTD DH RE P P CLH
Sbjct: 111 LSFRLVFRGTLRFPHKNYFVLWMVERMNGERRNSPGGAQTDGNNDHTRETPSP----CLH 166
Query: 491 HRHHRDNVQTS 523
+RHHR + S
Sbjct: 167 NRHHRSQPEPS 177
>TAIR9_protein||AT1G69330.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:26064138-26064950 REVERSE
Length = 271
Score = 113 bits (281), Expect = 2e-025
Identities = 47/82 (57%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Frame = +1
Query: 100 RRPVHDVHAHDECSDDESSSVGSSKEEEGLECPICWESFNIVENVPYVLWCGHTMCKNCI 279
+ P A +CSDDE S++ S++EEGLECPICWESFNIVENVPYVLWCGHT+C+NC+
Sbjct: 16 KSPKDSAQASSQCSDDEVSNI--SRDEEGLECPICWESFNIVENVPYVLWCGHTLCQNCV 73
Query: 280 LGLQWAIVKLPTHPVQLPLLPS 345
GLQ A+++L + +++P S
Sbjct: 74 FGLQSAVLRLSSQDIRIPFFVS 95
Score = 78 bits (191), Expect = 6e-015
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = +2
Query: 488 HHRHHRDNVQT--SLRKSLVFFVQLTAKFPLVVTCLLIILYAVPICAAILVMYILVTLLL 661
HH H + S KSL FF+ T+KFP V+ LLI+ +A+P IL +Y L+T+L
Sbjct: 186 HHDHSNQPSRQLFSFHKSLDFFISFTSKFPFVIIFLLIVFFAIPGSLIILALYFLLTILF 245
Query: 662 ALPSFLILYFAYPCLDWLVREIVT 733
A+P+ L+LYFAYP L+ LV EI +
Sbjct: 246 AVPAGLVLYFAYPILERLVNEITS 269
Score = 55 bits (132), Expect = 4e-008
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Frame = +2
Query: 332 LSFRLVFKGALRFPHKNYFLLWMVERMNGER-----RTSQTDDHQREPPPPPPPTC 484
LSFR+V+KG L+FP KN+FLLWMVE +NG+R RTS P P C
Sbjct: 102 LSFRIVYKGNLKFPRKNFFLLWMVESLNGDRTSHGDRTSHGSLVTDNQQSAPTPRC 157
>TAIR9_protein||AT1G74370.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:27958200-27958985 REVERSE
Length = 262
Score = 92 bits (228), Expect = 3e-019
Identities = 43/64 (67%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Frame = +1
Query: 145 DESSSVGSSKEEEGLECPICWESFNIVENVPYVLWCGHTMCKNCILGLQWAIV-KLPTHP 321
D S + +EE LECPICWESFN+VENVPYVLWCGHT+CK C+LGLQ AIV K P
Sbjct: 30 DRSGDGRKTTKEEKLECPICWESFNVVENVPYVLWCGHTICKYCLLGLQRAIVIKSSALP 89
Query: 322 VQLP 333
QLP
Sbjct: 90 FQLP 93
Score = 91 bits (223), Expect = 1e-018
Identities = 42/72 (58%), Positives = 54/72 (75%)
Frame = +2
Query: 521 SLRKSLVFFVQLTAKFPLVVTCLLIILYAVPICAAILVMYILVTLLLALPSFLILYFAYP 700
S+RKS+ L AKFPLVV LL+ LYA+P+ AA+L +Y VT LA+PSFL+LYFA+P
Sbjct: 191 SVRKSMALVAHLLAKFPLVVIFLLMALYAIPVSAAVLGVYFFVTFALAVPSFLVLYFAFP 250
Query: 701 CLDWLVREIVT* 736
L+WL+REI T*
Sbjct: 251 SLNWLIREIAT* 262
Score = 51 bits (121), Expect = 8e-007
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +2
Query: 332 LSFRLVFKGALRFPHKNYFLLWMVERMNGERRTSQTDD 445
LS RLV G +RFP KN++LLWMVE MNG R + +D+
Sbjct: 104 LSLRLVCNGTIRFPSKNFYLLWMVESMNGSRSEAPSDN 141
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,240,468,063
Number of Sequences: 33410
Number of Extensions: 22240468063
Number of Successful Extensions: 702354376
Number of sequences better than 0.0: 0
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