BLASTX 7.6.2
Query= UN46237 /QuerySize=875
(874 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|312282753|dbj|BAJ34242.1| unnamed protein product [Thellungie... 262 5e-068
gi|297851450|ref|XP_002893606.1| hypothetical protein ARALYDRAFT... 233 4e-059
gi|18397402|ref|NP_564351.1| transcription factor TCP24 [Arabido... 154 3e-035
gi|170679338|gb|ACB31729.1| TCP24 [Arabidopsis thaliana] 114 2e-023
>gi|312282753|dbj|BAJ34242.1| unnamed protein product [Thellungiella halophila]
Length = 339
Score = 262 bits (669), Expect = 5e-068
Identities = 156/220 (70%), Positives = 168/220 (76%), Gaps = 34/220 (15%)
Frame = +3
Query: 63 SLSKSSTSDSSLLSLSRTESRGK----ERERTSKERDNKDL---QSSFTQLLTSGFDEPN 221
S S TS+SSLLSLSRTE RGK RERT+KE+D KDL QSSFTQLLT GFDEPN
Sbjct: 126 SACSSGTSESSLLSLSRTEIRGKARERARERTAKEKD-KDLQNAQSSFTQLLTGGFDEPN 184
Query: 222 RNWTGGGSSDCF-NPVQLMPNSNSLNHRQEPSLNHHHH----SQNQYSFVPNYNFGISSS 386
RNWTGGG SDCF NPVQL+PNS+S P N++HH S NQ+SFVP+YNFGISSS
Sbjct: 185 RNWTGGGGSDCFNNPVQLIPNSSS---SSLPHFNNNHHRQETSMNQFSFVPDYNFGISSS 241
Query: 387 DSPGAT----GCYSSRGTLQSNSQSL-FLNNNNNNINQRSLSSSSSSSSPMDSQSISF-- 545
DSPGA GCYSSRGTLQSNSQSL FL NNNNINQRS+SSSSSSSSPMDSQSISF
Sbjct: 242 DSPGAAAINGGCYSSRGTLQSNSQSLSFL--NNNNINQRSISSSSSSSSPMDSQSISFFM 299
Query: 546 ---------SPQLPEAFDGRLCLYYGEGNRSSDDKGKERR 638
S QLP AFDGRL LYYGEGNRSS+DKGK+RR
Sbjct: 300 ATPPPLDHHSHQLPAAFDGRLYLYYGEGNRSSEDKGKDRR 339
Score = 235 bits (598), Expect = 9e-060
Identities = 142/200 (71%), Positives = 154/200 (77%), Gaps = 27/200 (13%)
Frame = +3
Query: 36 IDTNFDQTLSLSKSS----TSDSSLLSLSRTESRGK----ERERTSKERDNKDL---QSS 182
I+TNFDQ LSLSKS+ TS+SSLLSLSRTE RGK RERT+KE+D KDL QSS
Sbjct: 113 INTNFDQALSLSKSACSSGTSESSLLSLSRTEIRGKARERARERTAKEKD-KDLQNAQSS 171
Query: 183 FTQLLTSGFDEPNRNWTGGGSSDCF-NPVQLMPNSNSLNHRQEPSLNHHHH----SQNQY 347
FTQLLT GFDEPNRNWTGGG SDCF NPVQL+PNS+S P N++HH S NQ+
Sbjct: 172 FTQLLTGGFDEPNRNWTGGGGSDCFNNPVQLIPNSSS---SSLPHFNNNHHRQETSMNQF 228
Query: 348 SFVPNYNFGISSSDSPGAT----GCYSSRGTLQSNSQSL-FLNNNNNNINQRSLSSSSSS 512
SFVP+YNFGISSSDSPGA GCYSSRGTLQSNSQSL FL NNNNINQRS+SSSSSS
Sbjct: 229 SFVPDYNFGISSSDSPGAAAINGGCYSSRGTLQSNSQSLSFL--NNNNINQRSISSSSSS 286
Query: 513 SSPMDSQSISFSPQLPEAFD 572
SSPMDSQSISF P D
Sbjct: 287 SSPMDSQSISFFMATPPPLD 306
>gi|297851450|ref|XP_002893606.1| hypothetical protein ARALYDRAFT_473241
[Arabidopsis lyrata subsp. lyrata]
Length = 326
Score = 233 bits (592), Expect = 4e-059
Identities = 149/228 (65%), Positives = 167/228 (73%), Gaps = 36/228 (15%)
Frame = +3
Query: 21 SGLDPIDTNFDQTLSLSKSSTSDSSLLSLSRTESRGK----ERERTSKERDNKDL---QS 179
+ D +D N +QT S S TS+SSLLSLSRTE RGK RERT+KERD KDL QS
Sbjct: 113 TNFDYLDENQNQTKSAGSSGTSESSLLSLSRTEIRGKARERARERTAKERD-KDLQNAQS 171
Query: 180 SFTQLLTSGFDE--PNRNWTGGGSSDCFNPVQL-MPNSNSLNHRQEPSLNHHHHSQNQYS 350
SFTQLLT GFD+ NRNWTGG SDCFNPVQL +PNS+S QEP +N ++H +S
Sbjct: 172 SFTQLLTGGFDQQPSNRNWTGG--SDCFNPVQLQIPNSSS----QEP-MNQNNH---PFS 221
Query: 351 FVPNYNFGISSSDSPGATGCYSSRGTLQSNSQSLFLNNNNNNINQR-SLSSSSSSSSPMD 527
FVP+YNFGISSS S G YSSRGTLQSNSQSLFL NNNNI QR S+SSSSSSSSPMD
Sbjct: 222 FVPDYNFGISSSSS-AINGGYSSRGTLQSNSQSLFL--NNNNITQRSSISSSSSSSSPMD 278
Query: 528 SQSISF-----------SPQLPEAFDGRLCLYYGEGNRSSDDKGKERR 638
SQSISF + QLPE FDGRL LYYGEGNR+SDDKGK++R
Sbjct: 279 SQSISFFMATPPPLDHHNHQLPETFDGRLYLYYGEGNRNSDDKGKDKR 326
>gi|18397402|ref|NP_564351.1| transcription factor TCP24 [Arabidopsis thaliana]
Length = 324
Score = 154 bits (387), Expect = 3e-035
Identities = 106/224 (47%), Positives = 140/224 (62%), Gaps = 30/224 (13%)
Frame = +3
Query: 21 SGLDPIDTNFDQTLSLSKSSTSDSSLLSLSRTESRGK----ERERTSKERDNKDLQ---S 179
+ D +D N +QT S S TS+SSLLSLSRTE RGK RERT+K+RD KDLQ S
Sbjct: 113 TNFDHLDQNQNQTKSACSSGTSESSLLSLSRTEIRGKARERARERTAKDRD-KDLQNAHS 171
Query: 180 SFTQLLTSGFDE--PNRNWTGGGSSDCFNPVQL-MPNSNSLNHRQEPSLNHHHHSQNQYS 350
SFTQLLT GFD+ NRNWTGG SDCFNPVQL +PNS+S QEP +NH Y+
Sbjct: 172 SFTQLLTGGFDQQPSNRNWTGG--SDCFNPVQLQIPNSSS----QEP-MNHPFSFVPDYN 224
Query: 351 F-VPNYNFGISSSDSPGATGCYSSRGTLQSNSQSL-------FLNNNNNNINQRSLSSSS 506
F + + + I+ S T +S+ +N+ ++ +++++ ++ +S+S
Sbjct: 225 FGISSSSSAINGGYSSRGTLQSNSQSLFLNNNNNITQRSSISSSSSSSSPMDSQSISFFM 284
Query: 507 SSSSPMDSQSISFSPQLPEAFDGRLCLYYGEGNRSSDDKGKERR 638
++ P+D + QLPE FDGRL LYYGEGNRSSDDK KERR
Sbjct: 285 ATPPPLDHH----NHQLPETFDGRLYLYYGEGNRSSDDKAKERR 324
Score = 142 bits (356), Expect = 1e-031
Identities = 99/197 (50%), Positives = 115/197 (58%), Gaps = 16/197 (8%)
Frame = +3
Query: 9 SDSISGLDPIDTNFD-------QTLSLSKSSTSDSSLLSLSRTESRGKERERTSKERDNK 167
SDSI+ L ++TNFD QT S S TS+SSLLSLSRTE RGK RER ++ER K
Sbjct: 102 SDSITDLPLLNTNFDHLDQNQNQTKSACSSGTSESSLLSLSRTEIRGKARER-ARERTAK 160
Query: 168 DLQSSFTQLLTSGFDEPNRNWTGGGSSDCFNPVQLMPNSNSLN--HRQEPSLNHHHHSQN 341
D L + + TGG N S+ N Q P+ + +
Sbjct: 161 DRDKD----LQNAHSSFTQLLTGGFDQQPSNR-NWTGGSDCFNPVQLQIPNSSSQEPMNH 215
Query: 342 QYSFVPNYNFGISSSDSPGATGCYSSRGTLQSNSQSLFLNNNNNNINQRSLSSSSSSSSP 521
+SFVP+YNFGISSS S G YSSRGTLQSNSQSLFLNNNNN + S+SSSSSSSSP
Sbjct: 216 PFSFVPDYNFGISSSSS-AINGGYSSRGTLQSNSQSLFLNNNNNITQRSSISSSSSSSSP 274
Query: 522 MDSQSISFSPQLPEAFD 572
MDSQSISF P D
Sbjct: 275 MDSQSISFFMATPPPLD 291
>gi|170679338|gb|ACB31729.1| TCP24 [Arabidopsis thaliana]
Length = 175
Score = 114 bits (285), Expect = 2e-023
Identities = 84/187 (44%), Positives = 114/187 (60%), Gaps = 30/187 (16%)
Frame = +3
Query: 105 LSRTESRGK----ERERTSKERDNKDLQ---SSFTQLLTSGFDE--PNRNWTGGGSSDCF 257
LSRTE RGK RERT+K+RD KDLQ SSFTQLLT GFD+ NRNWTGG SDCF
Sbjct: 1 LSRTEIRGKARERARERTAKDRD-KDLQNAHSSFTQLLTGGFDQQPSNRNWTGG--SDCF 57
Query: 258 NPVQL-MPNSNSLNHRQEPSLNHHHHSQNQYSF-VPNYNFGISSSDSPGATGCYSSRGTL 431
NPVQL +PNS+S QEP +NH Y+F + + + I+ S T +S+
Sbjct: 58 NPVQLQIPNSSS----QEP-MNHPFSFVPDYNFGISSSSSAINGGYSSRGTLQSNSQSLF 112
Query: 432 QSNSQSL-------FLNNNNNNINQRSLSSSSSSSSPMDSQSISFSPQLPEAFDGRLCLY 590
+N+ ++ +++++ ++ +S+S ++ P+D + QLPE FDGRL LY
Sbjct: 113 LNNNNNITQRSSISSSSSSSSPMDSQSISFFMATPPPLDHH----NHQLPETFDGRLYLY 168
Query: 591 YGEGNRS 611
YGEGNRS
Sbjct: 169 YGEGNRS 175
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,027,124,687,929
Number of Sequences: 15229318
Number of Extensions: 5027124687929
Number of Successful Extensions: 1168073280
Number of sequences better than 0.0: 0
|
