BLASTX 7.6.2
Query= UN46352 /QuerySize=1007
(1006 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P0AGK6|YHBY_ECO57 RNA-binding protein yhbY OS=Escherichia col... 52 6e-006
sp|P0AGK5|YHBY_ECOL6 RNA-binding protein yhbY OS=Escherichia col... 52 6e-006
sp|P0AGK4|YHBY_ECOLI RNA-binding protein yhbY OS=Escherichia col... 52 6e-006
sp|P0AGK7|YHBY_SHIFL RNA-binding protein yhbY OS=Shigella flexne... 52 6e-006
>sp|P0AGK6|YHBY_ECO57 RNA-binding protein yhbY OS=Escherichia coli O157:H7
GN=yhbY PE=4 SV=1
Length = 97
Score = 52 bits (123), Expect = 6e-006
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +1
Query: 466 KEKKELASYAHSLGDKLKCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPEEMEDA 645
K+K+ L AH L + L+G +G+T+ V+ + LE +EL+KVKI E
Sbjct: 6 KQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62
Query: 646 VMHLEEATGSVAVGQIGRTVILYRPS 723
V + TG+ V IG+T++LYRP+
Sbjct: 63 VEAIVRETGACNVQVIGKTLVLYRPT 88
>sp|P0AGK5|YHBY_ECOL6 RNA-binding protein yhbY OS=Escherichia coli O6 GN=yhbY
PE=4 SV=1
Length = 97
Score = 52 bits (123), Expect = 6e-006
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +1
Query: 466 KEKKELASYAHSLGDKLKCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPEEMEDA 645
K+K+ L AH L + L+G +G+T+ V+ + LE +EL+KVKI E
Sbjct: 6 KQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62
Query: 646 VMHLEEATGSVAVGQIGRTVILYRPS 723
V + TG+ V IG+T++LYRP+
Sbjct: 63 VEAIVRETGACNVQVIGKTLVLYRPT 88
>sp|P0AGK4|YHBY_ECOLI RNA-binding protein yhbY OS=Escherichia coli (strain K12)
GN=yhbY PE=1 SV=1
Length = 97
Score = 52 bits (123), Expect = 6e-006
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +1
Query: 466 KEKKELASYAHSLGDKLKCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPEEMEDA 645
K+K+ L AH L + L+G +G+T+ V+ + LE +EL+KVKI E
Sbjct: 6 KQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62
Query: 646 VMHLEEATGSVAVGQIGRTVILYRPS 723
V + TG+ V IG+T++LYRP+
Sbjct: 63 VEAIVRETGACNVQVIGKTLVLYRPT 88
>sp|P0AGK7|YHBY_SHIFL RNA-binding protein yhbY OS=Shigella flexneri GN=yhbY PE=4
SV=1
Length = 97
Score = 52 bits (123), Expect = 6e-006
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +1
Query: 466 KEKKELASYAHSLGDKLKCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPEEMEDA 645
K+K+ L AH L + L+G +G+T+ V+ + LE +EL+KVKI E
Sbjct: 6 KQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62
Query: 646 VMHLEEATGSVAVGQIGRTVILYRPS 723
V + TG+ V IG+T++LYRP+
Sbjct: 63 VEAIVRETGACNVQVIGKTLVLYRPT 88
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 174,418,403,310
Number of Sequences: 518415
Number of Extensions: 174418403310
Number of Successful Extensions: 1059328112
Number of sequences better than 0.0: 0
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