BLASTX 7.6.2
Query= UN46402 /QuerySize=740
(739 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G27860.1 | Symbols: | unknown protein | chr5:... 300 5e-082
TAIR9_protein||AT5G27860.2 | Symbols: | unknown protein | chr5:... 300 5e-082
TAIR9_protein||AT5G53800.1 | Symbols: | unknown protein | chr5:... 70 2e-012
TAIR9_protein||AT1G20920.1 | Symbols: | DEAD box RNA helicase, ... 59 4e-009
TAIR9_protein||AT5G49400.1 | Symbols: | zinc knuckle (CCHC-type... 57 8e-009
TAIR9_protein||AT5G53930.1 | Symbols: | unknown protein | chr5:... 51 8e-007
TAIR9_protein||AT5G12230.1 | Symbols: | unknown protein | chr5:... 49 4e-006
>TAIR9_protein||AT5G27860.1 | Symbols: | unknown protein | chr5:9875068-9876442
REVERSE
Length = 178
Score = 300 bits (768), Expect = 5e-082
Identities = 157/178 (88%), Positives = 167/178 (93%), Gaps = 3/178 (1%)
Frame = +3
Query: 66 SSSSSSSDVSSDSSDSHRRRNDRRRHRRSDRDKDSLKVRKKSRSSSKRRRKRHRSSDSFD 245
SSSSSSSDVSSDSSDSHRRR DRR HRR+DRD+DSLKVRKKSRS+SK+RR+R SSDS D
Sbjct: 4 SSSSSSSDVSSDSSDSHRRRKDRRHHRRNDRDRDSLKVRKKSRSTSKKRRRRQHSSDSSD 63
Query: 246 SSYSDSSSSESSESEHERSRRHKKHDKPKKAKDKERSKSHRHKRHKNNRDRKNGEGEGSS 425
SSYSD SSSESS+SEHE+SRRHKKH+KPKKAKDKERSKSHRHKRHK NR+RK GEGEGSS
Sbjct: 64 SSYSD-SSSESSDSEHEKSRRHKKHEKPKKAKDKERSKSHRHKRHK-NRERKKGEGEGSS 121
Query: 426 GPVKLSKFLGRDKDDGGERRSAVSGKKIMLKVDKSKEDKAAESKRNELLKFLNASFD* 599
GPVKLSKFL RDKDD GERRSAVSGKKI+LKVDKSKEDKAAESKRNELLKFLNASFD*
Sbjct: 122 GPVKLSKFLNRDKDD-GERRSAVSGKKILLKVDKSKEDKAAESKRNELLKFLNASFD* 178
>TAIR9_protein||AT5G27860.2 | Symbols: | unknown protein | chr5:9875068-9876442
REVERSE
Length = 178
Score = 300 bits (768), Expect = 5e-082
Identities = 157/178 (88%), Positives = 167/178 (93%), Gaps = 3/178 (1%)
Frame = +3
Query: 66 SSSSSSSDVSSDSSDSHRRRNDRRRHRRSDRDKDSLKVRKKSRSSSKRRRKRHRSSDSFD 245
SSSSSSSDVSSDSSDSHRRR DRR HRR+DRD+DSLKVRKKSRS+SK+RR+R SSDS D
Sbjct: 4 SSSSSSSDVSSDSSDSHRRRKDRRHHRRNDRDRDSLKVRKKSRSTSKKRRRRQHSSDSSD 63
Query: 246 SSYSDSSSSESSESEHERSRRHKKHDKPKKAKDKERSKSHRHKRHKNNRDRKNGEGEGSS 425
SSYSD SSSESS+SEHE+SRRHKKH+KPKKAKDKERSKSHRHKRHK NR+RK GEGEGSS
Sbjct: 64 SSYSD-SSSESSDSEHEKSRRHKKHEKPKKAKDKERSKSHRHKRHK-NRERKKGEGEGSS 121
Query: 426 GPVKLSKFLGRDKDDGGERRSAVSGKKIMLKVDKSKEDKAAESKRNELLKFLNASFD* 599
GPVKLSKFL RDKDD GERRSAVSGKKI+LKVDKSKEDKAAESKRNELLKFLNASFD*
Sbjct: 122 GPVKLSKFLNRDKDD-GERRSAVSGKKILLKVDKSKEDKAAESKRNELLKFLNASFD* 178
>TAIR9_protein||AT5G53800.1 | Symbols: | unknown protein |
chr5:21848180-21849935 FORWARD
Length = 352
Score = 70 bits (169), Expect = 2e-012
Identities = 49/132 (37%), Positives = 68/132 (51%), Gaps = 11/132 (8%)
Frame = +3
Query: 18 KRSQLSSETMAASSSPSSSSSSSDVSSDSSDSHRRRNDRRRHRRSDRDKDSLKVRKKSRS 197
+R + T + S S S S S+ + R R DR + R+SD RK SRS
Sbjct: 46 RRRESKRRTKDGNDSGSESGLESGSESEKEERRRSRKDRGK-RKSD--------RKSSRS 96
Query: 198 SSKRRRKRHRSSDSFDSSYSDSSSSESSESEHERSRRHKKHDKPKKAKDKERSKSHRHK- 374
+RR SSDS S S+ S SE SESE ER RR +K K ++ ++KER + R K
Sbjct: 97 RRRRRDYSSSSSDSESESESEYSDSEESESEDERRRRKRKR-KEREEEEKERKRRRREKD 155
Query: 375 RHKNNRDRKNGE 410
+ K N+ K+G+
Sbjct: 156 KKKRNKSDKDGD 167
>TAIR9_protein||AT1G20920.1 | Symbols: | DEAD box RNA helicase, putative |
chr1:7285342-7288842 FORWARD
Length = 1167
Score = 59 bits (140), Expect = 4e-009
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 25/174 (14%)
Frame = +3
Query: 54 SSSPSSSSSSSDVSSDSSDSHRRRNDRRR-HRRSDRDKDSLKVRKKSRSSSKRR-RKRHR 227
S SS S DV + RR N++ R HR +RD+ K RK+ R +R+ ++R R
Sbjct: 93 SERRKSSDSEDDVEEEDERDKRRVNEKERGHREHERDRG--KDRKRDREREERKDKERER 150
Query: 228 SSDSFDSSYSDSSSSESSESEHERSRRHKKHDKPKKAKDKERSKSHRHKRHKNNRDRKNG 407
D + E E E ER + ++ ++ +D+ + R R R+R
Sbjct: 151 EKD------RERREREREEREKERVKERERREREDGERDRREREKERGSRRNRERERSRE 204
Query: 408 EG-EGSSGPVKLSKFLGRDKDDGGERRSAVSGKKIMLKVDKSKEDKAAESKRNE 566
G E S VK + L R + +GGER+ +K +E S R+E
Sbjct: 205 VGNEESDDDVK--RDLKRRRKEGGERK------------EKEREKSVGRSSRHE 244
>TAIR9_protein||AT5G49400.1 | Symbols: | zinc knuckle (CCHC-type) family
protein | chr5:20031154-20031981 FORWARD
Length = 276
Score = 57 bits (137), Expect = 8e-009
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Frame = +3
Query: 6 QKPFKRSQLSSETMAASSSPSSSSSSSDVSSDSSDSHRRRNDRRRHRRSDRDKDSLKVRK 185
+K +S S++ A+ S SS + SS+ S S ++RRR R++ K
Sbjct: 173 RKHRSKSDSESDSEASVFETDSDGSSGESSSEYSSSSDSEDERRRRRKA----------K 222
Query: 186 KSRSSSKRRRKRHRSSDSFDSSYSDSSSSESSESEHERSRRHKK 317
KS+ K+R++R R S S S+S S+ S+S+ +RSRR KK
Sbjct: 223 KSKKKQKQRKERRRRYSSSSSESSESESASDSDSDEDRSRRKKK 266
>TAIR9_protein||AT5G53930.1 | Symbols: | unknown protein |
chr5:21894387-21896283 REVERSE
Length = 530
Score = 51 bits (120), Expect = 8e-007
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Frame = +3
Query: 54 SSSPSSSSSSSDVSSDSSDSHRRRNDRRRHRRSDRDKDSLKVRKKSRSSSKRRRKRHRSS 233
S S SS S D SD R ++R +R D + +KK + S++RRKR SS
Sbjct: 69 SKKRSRKRYSSSESDDDSDDDRLLKKKKRSKRKDENVG----KKKKKVVSRKRRKRDLSS 124
Query: 234 DSFDSSYSDSSSSESSESEHERSRRHKKHDKPKKAKDKERSK 359
S S SD+ SES + + R ++ K K ++ + R +
Sbjct: 125 SSTSSEQSDNDGSESDDGKRWSRDRGRRLGKVKDSRSRSRDE 166
>TAIR9_protein||AT5G12230.1 | Symbols: | unknown protein | chr5:3953915-3955285
REVERSE
Length = 222
Score = 49 bits (114), Expect = 4e-006
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
Frame = +3
Query: 63 PSSSSSSSDVSSDSSDSHRRRNDRRRHRRSDRDKDSLKVRKKSRSSSKRRRKRHRSSDSF 242
P+ + + S S+S R DR+ + DRDKD + KK + K R K
Sbjct: 106 PAEKGAPTIPSKSKSESKDR--DRKHKKHKDRDKDKDREHKKHKHKHKDRSKDKDKDKDR 163
Query: 243 DSSYSDSSSSESSESEHERSRRHKKHDKPKKAKDKERSKSHRHKRHK 383
D + +S + + + +KHD + D +R K ++HK K
Sbjct: 164 DRKKDKNGHHDSGDHSKKHHDKKRKHDGDEDLNDVQRHKKNKHKSSK 210
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,307,662,547
Number of Sequences: 33410
Number of Extensions: 22307662547
Number of Successful Extensions: 702439419
Number of sequences better than 0.0: 0
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