BLASTX 7.6.2
Query= UN46470 /QuerySize=1043
(1042 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297810423|ref|XP_002873095.1| predicted protein [Arabidopsis ... 93 7e-017
gi|297851804|ref|XP_002893783.1| predicted protein [Arabidopsis ... 93 7e-017
gi|15242768|ref|NP_195968.1| RNA-binding (RRM/RBD/RNP motifs) fa... 83 6e-014
gi|297810419|ref|XP_002873093.1| predicted protein [Arabidopsis ... 77 3e-012
gi|297831128|ref|XP_002883446.1| predicted protein [Arabidopsis ... 77 5e-012
gi|297810421|ref|XP_002873094.1| predicted protein [Arabidopsis ... 76 9e-012
gi|297806309|ref|XP_002871038.1| predicted protein [Arabidopsis ... 75 1e-011
gi|297828670|ref|XP_002882217.1| predicted protein [Arabidopsis ... 75 1e-011
gi|145334285|ref|NP_001078524.1| RNA-binding (RRM/RBD/RNP motifs... 75 2e-011
gi|297788920|ref|XP_002862489.1| predicted protein [Arabidopsis ... 73 6e-011
gi|297792673|ref|XP_002864221.1| predicted protein [Arabidopsis ... 73 6e-011
gi|297849788|ref|XP_002892775.1| predicted protein [Arabidopsis ... 73 8e-011
gi|5923685|gb|AAD56336.1|AC009326_23 hypothetical protein [Arabi... 72 1e-010
gi|334185184|ref|NP_187528.2| RNA recognition motif-containing p... 72 1e-010
gi|79537384|ref|NP_200181.2| RNA-binding (RRM/RBD/RNP motifs) fa... 71 2e-010
gi|297788311|ref|XP_002862284.1| predicted protein [Arabidopsis ... 68 2e-009
gi|297810599|ref|XP_002873183.1| predicted protein [Arabidopsis ... 68 2e-009
gi|7378635|emb|CAB83311.1| putative protein [Arabidopsis thaliana] 67 4e-009
gi|9759064|dbj|BAB09542.1| unnamed protein product [Arabidopsis ... 62 2e-007
>gi|297810423|ref|XP_002873095.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 93 bits (229), Expect = 7e-017
Identities = 58/134 (43%), Positives = 78/134 (58%), Gaps = 7/134 (5%)
Frame = +3
Query: 33 MDESAIKG---LELNGCEAEIRESR---IVVEGYDTSLRREDVEEALRKHFASCGNIIHV 194
MDESAIKG LELN A R+ R I VEGYDT LR ++ AL KHFASCG I +
Sbjct: 1 MDESAIKGLKLLELNDSGAVSRKPRKTTISVEGYDTRLREYTLKLALEKHFASCGKITTI 60
Query: 195 YVPINEETDIPNRFSFIYVNGED-EEKALRLDGSDMGGRILQTYAYPFQENYLDDVLATL 371
YVP + + I +F+++ G+D EEKAL+L G+D+GG P Q++ +D +
Sbjct: 61 YVPRDYKRGILKSVTFMWIKGDDAEEKALQLSGTDVGGWTALVKPAPSQKDIMDPWCPAM 120
Query: 372 KEARQTQRT*IVLY 413
+TQR + Y
Sbjct: 121 LSKHETQRVRVTGY 134
>gi|297851804|ref|XP_002893783.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 276
Score = 93 bits (229), Expect = 7e-017
Identities = 50/98 (51%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Frame = +3
Query: 93 SRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDIPNRFSFIYVNGED-EE 269
SRI VEGYDTSL D++ ALRKHF+SCG I H+YVP + E +I F+FI++ GE EE
Sbjct: 59 SRICVEGYDTSLHEYDLKLALRKHFSSCGEITHIYVPRDFERNILKSFAFIHIAGEGAEE 118
Query: 270 KALRLDGSDMGGRILQTYAYPFQENYLDDVLATLKEAR 383
KAL L GSD GG + + P+ Y+D AT + R
Sbjct: 119 KALALSGSDAGGWNVFAKSSPYDGQYVDPGRATAESPR 156
>gi|15242768|ref|NP_195968.1| RNA-binding (RRM/RBD/RNP motifs) family protein
[Arabidopsis thaliana]
Length = 321
Score = 83 bits (204), Expect = 6e-014
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Frame = +3
Query: 33 MDESAI---KGLELNGCEAEIRESRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVP 203
M+ESAI K LELN + + + I VEGYDTSL+ + AL KHFASCG I +YVP
Sbjct: 1 MEESAIKRLKSLELNDSDKQSTSTAICVEGYDTSLKEYPLRLALTKHFASCGEITQIYVP 60
Query: 204 INEETDIPNRFSFIYVNGED-EEKALRLDGSDMGG 305
+ + I SF+++ GE E+KAL+L G+D+GG
Sbjct: 61 RDFKKKILKSVSFMWIKGEGAEDKALQLSGTDVGG 95
Score = 67 bits (162), Expect = 4e-009
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Frame = +3
Query: 99 IVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDIPNRFSFIYVNGED-EEKA 275
I VEGYDTSL++ +E L KHF SCG I HVYVP + E + +F+ + GE E+KA
Sbjct: 115 ISVEGYDTSLQKYLLELILEKHFDSCGEIRHVYVPTDYERGVLKSVAFLRIEGEGAEDKA 174
Query: 276 LRLDGSDMGG 305
L+L G+D+ G
Sbjct: 175 LQLSGTDVVG 184
>gi|297810419|ref|XP_002873093.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 161
Score = 77 bits (189), Expect = 3e-012
Identities = 45/109 (41%), Positives = 66/109 (60%), Gaps = 6/109 (5%)
Frame = +3
Query: 48 IKGLELN--GCEAEIRES---RIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINE 212
+K LE N G +++ S I VEGY+T+L+ + AL KHFASCG I +YVP +
Sbjct: 9 LKLLEFNDSGADSQTHSSTSTAISVEGYNTTLKEYPLRLALAKHFASCGKITQIYVPRDF 68
Query: 213 ETDIPNRFSFIYVNGED-EEKALRLDGSDMGGRILQTYAYPFQENYLDD 356
+ + R SF+++ G+D EEKAL+L G+D+GG P Q+ + DD
Sbjct: 69 KKKLLKRASFVWIEGDDAEEKALQLSGTDVGGWTAIVKPVPSQKIFYDD 117
>gi|297831128|ref|XP_002883446.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 319
Score = 77 bits (187), Expect = 5e-012
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Frame = +3
Query: 84 IRESRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDIPNRFSFIYVNGED 263
I + + VEGYDT LR+ ++ L KHFASCG I ++YVP + E I +F+ + GE
Sbjct: 42 ISSTTVSVEGYDTWLRKYPLKLVLEKHFASCGEITNIYVPTDFERGILKSVAFMRIEGEG 101
Query: 264 -EEKALRLDGSDMGGRILQTYAYPFQENYLDD 356
EEKAL+L G+D+GG P+Q+ ++DD
Sbjct: 102 AEEKALQLSGTDIGGWTAIVKPAPWQKVFMDD 133
>gi|297810421|ref|XP_002873094.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 76 bits (185), Expect = 9e-012
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Frame = +3
Query: 33 MDESAIKGLELNGCEAEIRESRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINE 212
+++S E N C + I VEGYDT LR+ ++ L KHFASCG I ++YVP +
Sbjct: 14 LNDSGSDSGESNCCSC--TSTTISVEGYDTWLRKYPLKLVLEKHFASCGEITNIYVPTDF 71
Query: 213 ETDIPNRFSFIYVNGED-EEKALRLDGSDMGGRILQTYAYPFQENYLDD 356
E I +F+ + GE EEKAL+L G+D+GG P Q+ ++DD
Sbjct: 72 ERGILKSVAFMRIEGEGAEEKALQLSGTDVGGWTAIVKPAPSQKVFMDD 120
>gi|297806309|ref|XP_002871038.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 248
Score = 75 bits (184), Expect = 1e-011
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +3
Query: 84 IRESRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDIPNRFSFIYVNGED 263
I + + VEGYDT LR+ ++ L KHFASCG I ++YVP + E I +F+ + GE
Sbjct: 42 ISSTTVSVEGYDTWLRKYPLKLVLEKHFASCGEITNIYVPTDFERGILKSVAFMRIEGEG 101
Query: 264 -EEKALRLDGSDMGGRILQTYAYPFQENYLDD 356
EEKAL+L G+D+GG P Q+ ++DD
Sbjct: 102 AEEKALQLSGTDVGGWTAIVKPAPSQKVFMDD 133
>gi|297828670|ref|XP_002882217.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 195
Score = 75 bits (184), Expect = 1e-011
Identities = 46/105 (43%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Frame = +3
Query: 48 IKGLELNGCEA-EIRESRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDI 224
++G E NG +A I + RI VEGYDTS+ D+E AL KHF+SCG I H+Y+P N E I
Sbjct: 1 MEGFESNGSDASNIPKDRIRVEGYDTSIYEYDLELALTKHFSSCGEISHIYIPRNFEKGI 60
Query: 225 PNRFSFI-YVNGEDEEKALRLDGSDM-GGRILQTYAYPFQENYLD 353
F+F+ + EKAL L S + GG + PF +Y+D
Sbjct: 61 LKSFAFVDFATEGAVEKALNLSRSAVEGGWRVFAEESPFNGDYID 105
>gi|145334285|ref|NP_001078524.1| RNA-binding (RRM/RBD/RNP motifs) family
protein [Arabidopsis thaliana]
Length = 226
Score = 75 bits (182), Expect = 2e-011
Identities = 45/92 (48%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Frame = +3
Query: 48 IKGLELNGCEAEIRESR-----IVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINE 212
+K L+LN A R+ R I VEGYDT LR V+ L KHFASCG I H+YVP +
Sbjct: 9 MKLLQLNEIGANSRKPRIPWTKISVEGYDTRLREYTVKLVLEKHFASCGKITHIYVPRDF 68
Query: 213 ETDIPNRFSFIYVNGE-DEEKALRLDGSDMGG 305
E I +F+ + GE EEKAL L G+D GG
Sbjct: 69 ERGILKSVAFMCIKGEGGEEKALLLSGTDAGG 100
>gi|297788920|ref|XP_002862489.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 73 bits (178), Expect = 6e-011
Identities = 52/111 (46%), Positives = 65/111 (58%), Gaps = 7/111 (6%)
Frame = +3
Query: 33 MDESAIK---GLELNGCEAEIRESRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVP 203
M+ES++K LELN C I S I VEGYDTSL ++ ALRKHFASCG I ++VP
Sbjct: 1 MEESSVKVQESLELN-CRKSI--STISVEGYDTSLHGYPLKLALRKHFASCGKIASMFVP 57
Query: 204 INEETDIPNRFSFIYVNGED-EEKALRLDGSDMGGRILQTYAYPFQENYLD 353
+ + I FI GE +KAL L GSD+G + A P QE+Y D
Sbjct: 58 RDFKRGILKSPLFIDFWGEGARDKALELSGSDVGRWNVVVKAVPRQEDYYD 108
>gi|297792673|ref|XP_002864221.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 240
Score = 73 bits (178), Expect = 6e-011
Identities = 52/111 (46%), Positives = 65/111 (58%), Gaps = 7/111 (6%)
Frame = +3
Query: 33 MDESAIK---GLELNGCEAEIRESRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVP 203
M+ES++K LELN C I S I VEGYDTSL ++ ALRKHFASCG I ++VP
Sbjct: 1 MEESSVKVQESLELN-CRKSI--STISVEGYDTSLHGYPLKLALRKHFASCGKIASMFVP 57
Query: 204 INEETDIPNRFSFIYVNGED-EEKALRLDGSDMGGRILQTYAYPFQENYLD 353
+ + I FI GE +KAL L GSD+G + A P QE+Y D
Sbjct: 58 RDFKRGILKSPLFIDFWGEGARDKALELSGSDVGRWNVVVKAVPRQEDYYD 108
>gi|297849788|ref|XP_002892775.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 73 bits (177), Expect = 8e-011
Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Frame = +3
Query: 57 LELNGCEAEIRESRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDIPNRF 236
++LNGC RI VEGYDTS+ D++ ALRKHF+SCG + +V VP + I R
Sbjct: 6 VQLNGCST---VCRISVEGYDTSVHAYDLKLALRKHFSSCGEVKNVNVPKDFVRGILKRC 62
Query: 237 SFIYVNGEDE-EKALRLDGSDMGGRILQTYAYPF 335
++I + GE EKAL+L GSD+ G + A PF
Sbjct: 63 AYICIVGEGALEKALQLSGSDVRGWTISVKASPF 96
>gi|5923685|gb|AAD56336.1|AC009326_23 hypothetical protein [Arabidopsis
thaliana]
Length = 198
Score = 72 bits (176), Expect = 1e-010
Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 6/105 (5%)
Frame = +3
Query: 33 MDESAIKGLELNGCEAEIRES---RIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVP 203
MDE A KGLE+ +IR+S RI V GYD L RE VE L+K F+ CG I V++P
Sbjct: 1 MDEIANKGLEVKR-SRKIRDSDIERISVTGYDIELPREHVESELKKLFSPCGEITDVHIP 59
Query: 204 INEETDIPNRFSFIYVNGE-DEEKALRLDGSDMGGRILQTYAYPF 335
+ + + +FIY GE +KAL+L+GSDMGG + A PF
Sbjct: 60 ETRNSSLWSH-AFIYFVGEGTADKALQLNGSDMGGWTVDAEADPF 103
>gi|334185184|ref|NP_187528.2| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 132
Score = 72 bits (176), Expect = 1e-010
Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 6/105 (5%)
Frame = +3
Query: 33 MDESAIKGLELNGCEAEIRES---RIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVP 203
MDE A KGLE+ +IR+S RI V GYD L RE VE L+K F+ CG I V++P
Sbjct: 1 MDEIANKGLEVKR-SRKIRDSDIERISVTGYDIELPREHVESELKKLFSPCGEITDVHIP 59
Query: 204 INEETDIPNRFSFIYVNGE-DEEKALRLDGSDMGGRILQTYAYPF 335
+ + + +FIY GE +KAL+L+GSDMGG + A PF
Sbjct: 60 ETRNSSLWSH-AFIYFVGEGTADKALQLNGSDMGGWTVDAEADPF 103
>gi|79537384|ref|NP_200181.2| RNA-binding (RRM/RBD/RNP motifs) family protein
[Arabidopsis thaliana]
Length = 251
Score = 71 bits (173), Expect = 2e-010
Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Frame = +3
Query: 33 MDESAIKGLELNGCEAEIRESRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINE 212
M+ESA++GLE S+I VEGYDTS+ ++ AL KHFASCG I+ + VP +
Sbjct: 1 MEESAVRGLESKDTNNRKCFSKISVEGYDTSVHEFPLKLALAKHFASCGKIVDIDVPRDF 60
Query: 213 ETDIPNRFSFIYVNGEDEE----KALRLDGSDMGGRILQTYAYPFQENYLD 353
+ I FI + ++ E KAL L G+D+GG + + P Q+ Y D
Sbjct: 61 KKRILKSPLFIIFHAKEGESPVDKALELSGTDVGGWNVVVKSLPGQQMYRD 111
>gi|297788311|ref|XP_002862284.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 68 bits (165), Expect = 2e-009
Identities = 55/145 (37%), Positives = 75/145 (51%), Gaps = 12/145 (8%)
Frame = +3
Query: 54 GLELNGCEA-EIRE----SRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEET 218
G E NG +A +I + SRI VEGY+TSL D++ AL KHFASCG II +YVP N E
Sbjct: 1 GFESNGNDASDIPKRRGFSRISVEGYETSLHAYDLKLALTKHFASCGKIISIYVPRNAEK 60
Query: 219 DIPNRFSFIYVNGEDEEKA---LRLDGSDMGGRILQTYAYPFQENYLDDVLATLKEARQT 389
D RF F+ + EK R + ++ R + Y + + + D L+E
Sbjct: 61 DTIQRFDFVMPSCILPEKVPLRRRWNLVEVTSR-REDGVYTLRSHLIRDNTMILREPNTW 119
Query: 390 QRT*IVLYILIYLYVCCSFVMLLIV 464
+ LI L+VC VMLLI+
Sbjct: 120 SQN---ASKLISLFVCVLVVMLLIL 141
>gi|297810599|ref|XP_002873183.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 338
Score = 68 bits (165), Expect = 2e-009
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Frame = +3
Query: 96 RIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPI---NEETDIPNRFSFIYVNGEDE 266
RI V GYDT L +DV AL +HF+SCG I +Y+P+ +T + + + G+D
Sbjct: 16 RIKVTGYDTGLPLDDVYTALAEHFSSCGEIWEIYIPLKFDETKTSLNSHGVMCLLGGQDA 75
Query: 267 -EKALRLDGSDMGGRILQTYAYPFQENYLDDVLATLK 374
EKAL+L GS++GG + AYP+ N D V+ ++
Sbjct: 76 VEKALQLTGSNVGGWNVSVEAYPYPANANDRVIVIVE 112
>gi|7378635|emb|CAB83311.1| putative protein [Arabidopsis thaliana]
Length = 248
Score = 67 bits (162), Expect = 4e-009
Identities = 35/66 (53%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +3
Query: 111 GYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDIPNRFSFIYVNGE-DEEKALRLD 287
GYDT LR V+ L KHFASCG I H+YVP + E I +F+ + GE EEKAL L
Sbjct: 18 GYDTRLREYTVKLVLEKHFASCGKITHIYVPRDFERGILKSVAFMCIKGEGGEEKALLLS 77
Query: 288 GSDMGG 305
G+D GG
Sbjct: 78 GTDAGG 83
>gi|9759064|dbj|BAB09542.1| unnamed protein product [Arabidopsis thaliana]
Length = 248
Score = 62 bits (148), Expect = 2e-007
Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Frame = +3
Query: 93 SRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDIPNRFSFIYVNGEDEE- 269
S+I VEGYDTS+ ++ AL KHFASCG I+ + VP + + I FI + ++ E
Sbjct: 18 SKISVEGYDTSVHEFPLKLALAKHFASCGKIVDIDVPRDFKKRILKSPLFIIFHAKEGES 77
Query: 270 ---KALRLDGSDMGGRILQTYAYPFQENYLD 353
KAL L G+D+GG + + P Q+ Y D
Sbjct: 78 PVDKALELSGTDVGGWNVVVKSLPGQQMYRD 108
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,027,124,687,929
Number of Sequences: 15229318
Number of Extensions: 5027124687929
Number of Successful Extensions: 1168073280
Number of sequences better than 0.0: 0
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