BLASTX 7.6.2
Query= UN46471 /QuerySize=735
(734 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G32060.1 | Symbols: | 40S ribosomal protein S... 257 7e-069
TAIR9_protein||AT2G32060.3 | Symbols: | 40S ribosomal protein S... 257 7e-069
TAIR9_protein||AT2G32060.2 | Symbols: | 40S ribosomal protein S... 257 7e-069
TAIR9_protein||AT1G15930.2 | Symbols: | 40S ribosomal protein S... 240 9e-064
TAIR9_protein||AT1G15930.1 | Symbols: | 40S ribosomal protein S... 240 9e-064
>TAIR9_protein||AT2G32060.1 | Symbols: | 40S ribosomal protein S12 (RPS12C) |
chr2:13639228-13640104 REVERSE
Length = 145
Score = 257 bits (655), Expect = 7e-069
Identities = 128/145 (88%), Positives = 137/145 (94%), Gaps = 2/145 (1%)
Frame = +3
Query: 96 GDEAAAAAPTVVPPVAEAAVIPEDMGLLTALELTLRKARAHGGVVRGLHESAKLIEKRSA 275
GDEA AA VVPPVAEAAVIPEDM + TALELT+RK+RA+GGVVRGLHESAKLIEKR+A
Sbjct: 3 GDEAVAA--PVVPPVAEAAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNA 60
Query: 276 QLCVLAEDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 455
QLCVLAEDCNQPDYVKLVKALCADHSI LLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS
Sbjct: 61 QLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 120
Query: 456 CLVVKDYGEETTALNIVKKHIESN* 530
CLV+KD+GEETTALNIVKKH++SN*
Sbjct: 121 CLVIKDFGEETTALNIVKKHLDSN* 145
>TAIR9_protein||AT2G32060.3 | Symbols: | 40S ribosomal protein S12 (RPS12C) |
chr2:13639228-13640104 REVERSE
Length = 145
Score = 257 bits (655), Expect = 7e-069
Identities = 128/145 (88%), Positives = 137/145 (94%), Gaps = 2/145 (1%)
Frame = +3
Query: 96 GDEAAAAAPTVVPPVAEAAVIPEDMGLLTALELTLRKARAHGGVVRGLHESAKLIEKRSA 275
GDEA AA VVPPVAEAAVIPEDM + TALELT+RK+RA+GGVVRGLHESAKLIEKR+A
Sbjct: 3 GDEAVAA--PVVPPVAEAAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNA 60
Query: 276 QLCVLAEDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 455
QLCVLAEDCNQPDYVKLVKALCADHSI LLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS
Sbjct: 61 QLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 120
Query: 456 CLVVKDYGEETTALNIVKKHIESN* 530
CLV+KD+GEETTALNIVKKH++SN*
Sbjct: 121 CLVIKDFGEETTALNIVKKHLDSN* 145
>TAIR9_protein||AT2G32060.2 | Symbols: | 40S ribosomal protein S12 (RPS12C) |
chr2:13639228-13640104 REVERSE
Length = 145
Score = 257 bits (655), Expect = 7e-069
Identities = 128/145 (88%), Positives = 137/145 (94%), Gaps = 2/145 (1%)
Frame = +3
Query: 96 GDEAAAAAPTVVPPVAEAAVIPEDMGLLTALELTLRKARAHGGVVRGLHESAKLIEKRSA 275
GDEA AA VVPPVAEAAVIPEDM + TALELT+RK+RA+GGVVRGLHESAKLIEKR+A
Sbjct: 3 GDEAVAA--PVVPPVAEAAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNA 60
Query: 276 QLCVLAEDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 455
QLCVLAEDCNQPDYVKLVKALCADHSI LLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS
Sbjct: 61 QLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 120
Query: 456 CLVVKDYGEETTALNIVKKHIESN* 530
CLV+KD+GEETTALNIVKKH++SN*
Sbjct: 121 CLVIKDFGEETTALNIVKKHLDSN* 145
>TAIR9_protein||AT1G15930.2 | Symbols: | 40S ribosomal protein S12 (RPS12A) |
chr1:5471702-5472741 FORWARD
Length = 145
Score = 240 bits (611), Expect = 9e-064
Identities = 124/146 (84%), Positives = 129/146 (88%), Gaps = 4/146 (2%)
Frame = +3
Query: 96 GDEAAAAAPTVV-PPVAEAAVIPEDMGLLTALELTLRKARAHGGVVRGLHESAKLIEKRS 272
GDE AAP VV PPVAE A IPEDM L+TALELTLRKARA+GGVVRGLHE AKLIEKR
Sbjct: 3 GDE---AAPVVVPPPVAEPAAIPEDMDLMTALELTLRKARAYGGVVRGLHECAKLIEKRV 59
Query: 273 AQLCVLAEDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGC 452
AQL VLAEDCNQPDYVKLVKALCADH + LLTVPSAKTLGEWAGLCKIDSEGNARKVVGC
Sbjct: 60 AQLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLGEWAGLCKIDSEGNARKVVGC 119
Query: 453 SCLVVKDYGEETTALNIVKKHIESN* 530
SCLVVKD+GEETTAL+IV KHI S *
Sbjct: 120 SCLVVKDFGEETTALSIVNKHIASQ* 145
>TAIR9_protein||AT1G15930.1 | Symbols: | 40S ribosomal protein S12 (RPS12A) |
chr1:5471702-5472741 FORWARD
Length = 145
Score = 240 bits (611), Expect = 9e-064
Identities = 124/146 (84%), Positives = 129/146 (88%), Gaps = 4/146 (2%)
Frame = +3
Query: 96 GDEAAAAAPTVV-PPVAEAAVIPEDMGLLTALELTLRKARAHGGVVRGLHESAKLIEKRS 272
GDE AAP VV PPVAE A IPEDM L+TALELTLRKARA+GGVVRGLHE AKLIEKR
Sbjct: 3 GDE---AAPVVVPPPVAEPAAIPEDMDLMTALELTLRKARAYGGVVRGLHECAKLIEKRV 59
Query: 273 AQLCVLAEDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGC 452
AQL VLAEDCNQPDYVKLVKALCADH + LLTVPSAKTLGEWAGLCKIDSEGNARKVVGC
Sbjct: 60 AQLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLGEWAGLCKIDSEGNARKVVGC 119
Query: 453 SCLVVKDYGEETTALNIVKKHIESN* 530
SCLVVKD+GEETTAL+IV KHI S *
Sbjct: 120 SCLVVKDFGEETTALSIVNKHIASQ* 145
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,307,662,547
Number of Sequences: 33410
Number of Extensions: 22307662547
Number of Successful Extensions: 702439419
Number of sequences better than 0.0: 0
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