BLASTX 7.6.2
Query= UN46486 /QuerySize=954
(953 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G10060.1 | Symbols: | FUNCTIONS IN: molecular... 406 1e-113
TAIR9_protein||AT5G65180.1 | Symbols: | FUNCTIONS IN: molecular... 235 5e-062
TAIR9_protein||AT5G65180.2 | Symbols: | unknown protein | chr5:... 235 5e-062
TAIR9_protein||AT3G26990.1 | Symbols: | FUNCTIONS IN: molecular... 62 6e-010
>TAIR9_protein||AT5G10060.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF618 (InterPro:IPR006903), Regulation of nuclear pre-mRNA
protein (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G65180.1); Has 4531 Blast hits to 4161 proteins in 412
species: Archae - 14; Bacteria - 404; Metazoa - 1999; Fungi - 666;
Plants - 262; Viruses - 36; Other Eukaryotes - 1150 (source: NCBI
BLink). | chr5:3145994-3148049 REVERSE
Length = 470
Score = 406 bits (1043), Expect = 1e-113
Identities = 217/268 (80%), Positives = 231/268 (86%), Gaps = 16/268 (5%)
Frame = +2
Query: 2 TAKDNPKRESLAKELEEEEYLLRQCIEKLKSVQGSRTSLVNQLKDALREQESELEYLEAQ 181
TAKDNPKR+SLAKELEEEEYLLRQCIEKLKSVQGSR+SLVNQLKDALREQESEL+ L+AQ
Sbjct: 213 TAKDNPKRKSLAKELEEEEYLLRQCIEKLKSVQGSRSSLVNQLKDALREQESELDNLKAQ 272
Query: 182 IQVAQEQTEEAQNMQKRLKDEDYTPKPTTVAPGSVSTDNNNDTKSGQASKMTPASIAAML 361
IQVA+EQTEEAQNMQKRL DEDYT K TT A + T+ N++TKSGQASKMTPASIAAML
Sbjct: 273 IQVAKEQTEEAQNMQKRLNDEDYTSKQTTAA--TTITETNDNTKSGQASKMTPASIAAML 330
Query: 362 TASTSSHMIMQSVLSSFAAEATKSSGLTKPESTVPVSDSNAFVPSYN---NQTPATQGQY 532
TASTSSHMIMQSVLSSFAAEATK+SGL+K ESTVPVSD+NA PSYN NQTP TQGQY
Sbjct: 331 TASTSSHMIMQSVLSSFAAEATKTSGLSKSESTVPVSDTNASFPSYNNSQNQTPTTQGQY 390
Query: 533 HHVIPNPAAPPQPQFLNPPVMNNPYGFGNIPLMPPGLPPPPPPPHMIGNQQ---FQSNSA 703
HVIPN PP PQFL PPVMNNPY FGNIPLMPPGLPPPPPPPH+IGNQQ QSNSA
Sbjct: 391 -HVIPN---PPPPQFLKPPVMNNPYAFGNIPLMPPGLPPPPPPPHLIGNQQPQIPQSNSA 446
Query: 704 QQQQQQQPQQGTYQPSGIMYYGAPHHS* 787
QQ QQ T+QP GIMYYGAPHHS*
Sbjct: 447 QQSQQGP----TFQPPGIMYYGAPHHS* 470
>TAIR9_protein||AT5G65180.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18
plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903),
Regulation of nuclear pre-mRNA protein (InterPro:IPR006569), ENTH/VHS
(InterPro:IPR008942); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G10060.1); Has 3523 Blast hits to 3241
proteins in 333 species: Archae - 25; Bacteria - 251; Metazoa - 1575;
Fungi - 421; Plants - 142; Viruses - 17; Other Eukaryotes - 1092
(source: NCBI BLink). | chr5:26045625-26047806 FORWARD
Length = 440
Score = 235 bits (597), Expect = 5e-062
Identities = 145/233 (62%), Positives = 168/233 (72%), Gaps = 43/233 (18%)
Frame = +2
Query: 2 TAKDNPKRESLAKELEEEEYLLRQCIEKLKSVQGSRTSLVNQLKDALREQESELEYLEAQ 181
TAKD P++ESLAKELEEEE +LRQ +EKLKSV+ SRTSLVN L++ALREQESELE L++Q
Sbjct: 212 TAKD-PRKESLAKELEEEENILRQSVEKLKSVEESRTSLVNHLREALREQESELENLQSQ 270
Query: 182 IQVAQEQTEEAQNMQKRLKDEDYTPKPTTVAPGSVSTDNNNDTKSGQASKMTPASIAA-- 355
IQVAQEQTEEAQNMQKRL +E TP NNN+ SGQ++K+TPASIAA
Sbjct: 271 IQVAQEQTEEAQNMQKRLNNE--TPV------------NNNNGTSGQSAKITPASIAAMA 316
Query: 356 -MLTASTSSHMIMQSVLSSFAAEATKSSGLTKPESTVPVSDSNAFVPSYNNQTPATQGQY 532
MLT+ST+S MIM SVLSSFAAEAT++SGLTK + SD+NAFV N Q
Sbjct: 317 EMLTSSTNSSMIMHSVLSSFAAEATQTSGLTKSNT----SDTNAFVVPPN-------PQQ 365
Query: 533 HHVIPNPAAPPQPQFLNPPVMNNPYGFGNIPLMPPG-LPPPPP---PPHMIGN 679
+H+IPNPAA Q PYGFGNIPLMPPG LPPPPP PPHM+ N
Sbjct: 366 YHIIPNPAASQQ----------FPYGFGNIPLMPPGALPPPPPGTLPPHMMNN 408
Score = 84 bits (207), Expect = 9e-017
Identities = 47/85 (55%), Positives = 53/85 (62%), Gaps = 13/85 (15%)
Frame = +2
Query: 560 PPQPQ----FLNPPVMNN-PYGFGNIPLMPPG-LPPPPP---PPHMIGNQQFQSNSAQQQ 712
PP PQ NP PYGFGNIPLMPPG LPPPPP PPHM+ N Q N+AQQQ
Sbjct: 360 PPNPQQYHIIPNPAASQQFPYGFGNIPLMPPGALPPPPPGTLPPHMMNNNN-QPNAAQQQ 418
Query: 713 QQQQPQQGTYQPSGIMYYGAPHHS* 787
QQ ++ P G+MY+G PHHS*
Sbjct: 419 AQQGQ---SFHPPGMMYFGPPHHS* 440
>TAIR9_protein||AT5G65180.2 | Symbols: | unknown protein |
chr5:26046478-26047806 FORWARD
Length = 312
Score = 235 bits (597), Expect = 5e-062
Identities = 145/233 (62%), Positives = 168/233 (72%), Gaps = 43/233 (18%)
Frame = +2
Query: 2 TAKDNPKRESLAKELEEEEYLLRQCIEKLKSVQGSRTSLVNQLKDALREQESELEYLEAQ 181
TAKD P++ESLAKELEEEE +LRQ +EKLKSV+ SRTSLVN L++ALREQESELE L++Q
Sbjct: 84 TAKD-PRKESLAKELEEEENILRQSVEKLKSVEESRTSLVNHLREALREQESELENLQSQ 142
Query: 182 IQVAQEQTEEAQNMQKRLKDEDYTPKPTTVAPGSVSTDNNNDTKSGQASKMTPASIAA-- 355
IQVAQEQTEEAQNMQKRL +E TP NNN+ SGQ++K+TPASIAA
Sbjct: 143 IQVAQEQTEEAQNMQKRLNNE--TPV------------NNNNGTSGQSAKITPASIAAMA 188
Query: 356 -MLTASTSSHMIMQSVLSSFAAEATKSSGLTKPESTVPVSDSNAFVPSYNNQTPATQGQY 532
MLT+ST+S MIM SVLSSFAAEAT++SGLTK + SD+NAFV N Q
Sbjct: 189 EMLTSSTNSSMIMHSVLSSFAAEATQTSGLTKSNT----SDTNAFVVPPN-------PQQ 237
Query: 533 HHVIPNPAAPPQPQFLNPPVMNNPYGFGNIPLMPPG-LPPPPP---PPHMIGN 679
+H+IPNPAA Q PYGFGNIPLMPPG LPPPPP PPHM+ N
Sbjct: 238 YHIIPNPAASQQ----------FPYGFGNIPLMPPGALPPPPPGTLPPHMMNN 280
Score = 84 bits (207), Expect = 9e-017
Identities = 47/85 (55%), Positives = 53/85 (62%), Gaps = 13/85 (15%)
Frame = +2
Query: 560 PPQPQ----FLNPPVMNN-PYGFGNIPLMPPG-LPPPPP---PPHMIGNQQFQSNSAQQQ 712
PP PQ NP PYGFGNIPLMPPG LPPPPP PPHM+ N Q N+AQQQ
Sbjct: 232 PPNPQQYHIIPNPAASQQFPYGFGNIPLMPPGALPPPPPGTLPPHMMNNNN-QPNAAQQQ 290
Query: 713 QQQQPQQGTYQPSGIMYYGAPHHS* 787
QQ ++ P G+MY+G PHHS*
Sbjct: 291 AQQGQ---SFHPPGMMYFGPPHHS* 312
>TAIR9_protein||AT3G26990.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF618 (InterPro:IPR006903), Regulation of nuclear
pre-mRNA protein (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G10060.1); Has 815 Blast hits to 806 proteins in 138 species:
Archae - 0; Bacteria - 10; Metazoa - 490; Fungi - 159; Plants - 81;
Viruses - 1; Other Eukaryotes - 74 (source: NCBI BLink). |
chr3:9948426-9951557 REVERSE
Length = 514
Score = 62 bits (148), Expect = 6e-010
Identities = 28/78 (35%), Positives = 55/78 (70%)
Frame = +2
Query: 29 SLAKELEEEEYLLRQCIEKLKSVQGSRTSLVNQLKDALREQESELEYLEAQIQVAQEQTE 208
++ KEL+ + +LR CIE+L +++ SRTSL++ L++AL+EQE +LE + +Q+A+ Q++
Sbjct: 211 AVVKELQGQHVILRDCIEQLGAMETSRTSLISHLREALQEQELKLEQVRNHLQIARFQSD 270
Query: 209 EAQNMQKRLKDEDYTPKP 262
++ ++L D + +P
Sbjct: 271 RTGDLCRQLLDHGGSSQP 288
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,307,662,547
Number of Sequences: 33410
Number of Extensions: 22307662547
Number of Successful Extensions: 702439419
Number of sequences better than 0.0: 0
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