BLASTX 7.6.2
Query= UN46565 /QuerySize=717
(716 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G55030.1 | Symbols: | F-box family protein | ... 129 2e-030
TAIR9_protein||AT5G56800.1 | Symbols: | FUNCTIONS IN: molecular... 119 2e-027
TAIR9_protein||AT3G52680.1 | Symbols: | F-box family protein | ... 116 2e-026
TAIR9_protein||AT3G52680.2 | Symbols: | F-box family protein | ... 116 2e-026
TAIR9_protein||AT1G50980.1 | Symbols: | F-box family protein | ... 111 4e-025
TAIR9_protein||AT5G56420.1 | Symbols: | F-box family protein | ... 92 4e-019
TAIR9_protein||AT5G56420.2 | Symbols: | F-box family protein | ... 92 4e-019
TAIR9_protein||AT5G56560.1 | Symbols: | F-box family protein | ... 91 8e-019
TAIR9_protein||AT5G50270.1 | Symbols: | F-box family protein | ... 87 7e-018
TAIR9_protein||AT3G26930.1 | Symbols: | FUNCTIONS IN: molecular... 87 1e-017
TAIR9_protein||AT3G50710.1 | Symbols: | F-box family protein | ... 86 3e-017
TAIR9_protein||AT4G13965.1 | Symbols: | FUNCTIONS IN: molecular... 82 2e-016
TAIR9_protein||AT3G26920.1 | Symbols: | FUNCTIONS IN: molecular... 79 2e-015
TAIR9_protein||AT5G56430.1 | Symbols: | F-box family protein | ... 76 2e-014
TAIR9_protein||AT5G56400.1 | Symbols: | F-box family protein | ... 72 2e-013
TAIR9_protein||AT1G32375.1 | Symbols: | F-box family protein | ... 71 7e-013
TAIR9_protein||AT5G56390.1 | Symbols: | F-box family protein | ... 70 9e-013
>TAIR9_protein||AT1G55030.1 | Symbols: | F-box family protein |
chr1:20530417-20531768 REVERSE
Length = 423
Score = 129 bits (324), Expect = 2e-030
Identities = 86/226 (38%), Positives = 128/226 (56%), Gaps = 9/226 (3%)
Frame = +3
Query: 57 MSEFPDELLLKMLNLLPTKDAVATSVLSKRWISLWKEMNAFRYDG----STVGRVYWGFA 224
+S+ P+ L+L++L LPTK A+ TSVLSK+W S WK M +D + V
Sbjct: 11 ISQLPEPLILQILGSLPTKVAITTSVLSKQWQSHWKMMPKLEFDSFLRRLDLENVTKCLL 70
Query: 225 LFITKLLNLDSLDLKINPYSTNKYINYLVNIAVARSLRKLRVEMVC--GSFEFPKSLFIH 398
+L SL ++++ + I L+ IA+ R++RKL +E+ G+F FP+SL+
Sbjct: 71 SHKAPVLQTFSLKVRLDRRNNAVDIGCLIGIAMTRNVRKLVLEVYFHRGTFTFPRSLYHC 130
Query: 399 SNLGTVILEKVSLEDPPLDARFVCLKSLHLLSVRFSSDESVETLLSRCPVLEDLVVGRSS 578
L T+ L + D P LK+L+LL+V F DESV LLS CP L+DLV+ R+S
Sbjct: 131 ETLETLELILNVVMDVPPSVYLKSLKTLYLLAVDFKDDESVINLLSGCPNLQDLVMRRNS 190
Query: 579 FTNVMVFTIDVPTLRSLCVDNSVGESRPESVHGFVIRTPSLRWFSI 716
+NV FTI VP+L+ L + N G P+ G+ I TPSL++ +
Sbjct: 191 SSNVKTFTIAVPSLQRLAIHN--GSGTPQHC-GYTINTPSLKYLKL 233
>TAIR9_protein||AT5G56800.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich
repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match
is: F-box family protein (TAIR:AT5G56560.1); Has 519 Blast hits to 504
proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
4; Plants - 515; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink). | chr5:22972989-22974208 FORWARD
Length = 345
Score = 119 bits (298), Expect = 2e-027
Identities = 68/129 (52%), Positives = 88/129 (68%), Gaps = 1/129 (0%)
Frame = +3
Query: 333 LRKLRVEMVCGSFEFPKSL-FIHSNLGTVILEKVSLEDPPLDARFVCLKSLHLLSVRFSS 509
L ++ +E GS P+SL H NL T+ L+K+S D F LK+LHLLSVRFS
Sbjct: 32 LSEVSIESCYGSQTLPRSLRSRHWNLKTLKLKKLSFVDTDAYMWFESLKTLHLLSVRFSD 91
Query: 510 DESVETLLSRCPVLEDLVVGRSSFTNVMVFTIDVPTLRSLCVDNSVGESRPESVHGFVIR 689
D+SV+ LLS CP LEDLVV R+++ NV +F+I+VP+LRSL +D S SRP VHGFVI
Sbjct: 92 DKSVQRLLSVCPKLEDLVVKRTTYVNVRIFSINVPSLRSLSIDYSWAVSRPADVHGFVID 151
Query: 690 TPSLRWFSI 716
PSLR+ +I
Sbjct: 152 APSLRFMNI 160
>TAIR9_protein||AT3G52680.1 | Symbols: | F-box family protein |
chr3:19527075-19528838 FORWARD
Length = 457
Score = 116 bits (288), Expect = 2e-026
Identities = 89/236 (37%), Positives = 124/236 (52%), Gaps = 24/236 (10%)
Frame = +3
Query: 57 MSEFPDELLLKMLNLLPTKDAVATSVLSKRWISLWKEMNAFRYDGSTVGRVYWGFALFIT 236
+SE PD LLLK+L+ LPT VATSVLSK+W SLWK + +D ++ F+ +
Sbjct: 23 ISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDSDDYESEHYTFSEIVC 82
Query: 237 KLL------NLDSLDLK---INPYSTNKYINYLVNIAVARSLRKLRVEMVCG------SF 371
K L+S LK NP I V IA +R LR+L ++ +F
Sbjct: 83 KSFLSHKAPVLESFRLKFVNFNPVD----IGLWVGIAFSRHLRELVLDFYPAELGKGVTF 138
Query: 372 EFPKSLFIHSNLGTVILEKVSLEDPPLDARFVCLKSLHLLSVRFSSDESVETLLSRCPVL 551
FP SL + L T+ L L D P L++LHL VR+ + SV LLS CP L
Sbjct: 139 TFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLHLEFVRYKDESSVRNLLSGCPGL 198
Query: 552 EDLVVGRSSFTNVMVFTIDVPTLRSLCV-DNSVGESRPESVHGFVIRTPSLRWFSI 716
E+L + R +++ VFTI+VP+L+ L + DN+ G PE G+VI P L++ I
Sbjct: 199 EELRLYRGDDSDIKVFTIEVPSLQRLTIHDNNDG---PE-FWGYVINAPFLKYLLI 250
>TAIR9_protein||AT3G52680.2 | Symbols: | F-box family protein |
chr3:19527075-19528838 FORWARD
Length = 457
Score = 116 bits (288), Expect = 2e-026
Identities = 89/236 (37%), Positives = 124/236 (52%), Gaps = 24/236 (10%)
Frame = +3
Query: 57 MSEFPDELLLKMLNLLPTKDAVATSVLSKRWISLWKEMNAFRYDGSTVGRVYWGFALFIT 236
+SE PD LLLK+L+ LPT VATSVLSK+W SLWK + +D ++ F+ +
Sbjct: 23 ISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDSDDYESEHYTFSEIVC 82
Query: 237 KLL------NLDSLDLK---INPYSTNKYINYLVNIAVARSLRKLRVEMVCG------SF 371
K L+S LK NP I V IA +R LR+L ++ +F
Sbjct: 83 KSFLSHKAPVLESFRLKFVNFNPVD----IGLWVGIAFSRHLRELVLDFYPAELGKGVTF 138
Query: 372 EFPKSLFIHSNLGTVILEKVSLEDPPLDARFVCLKSLHLLSVRFSSDESVETLLSRCPVL 551
FP SL + L T+ L L D P L++LHL VR+ + SV LLS CP L
Sbjct: 139 TFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLHLEFVRYKDESSVRNLLSGCPGL 198
Query: 552 EDLVVGRSSFTNVMVFTIDVPTLRSLCV-DNSVGESRPESVHGFVIRTPSLRWFSI 716
E+L + R +++ VFTI+VP+L+ L + DN+ G PE G+VI P L++ I
Sbjct: 199 EELRLYRGDDSDIKVFTIEVPSLQRLTIHDNNDG---PE-FWGYVINAPFLKYLLI 250
>TAIR9_protein||AT1G50980.1 | Symbols: | F-box family protein |
chr1:18900541-18902057 REVERSE
Length = 371
Score = 111 bits (277), Expect = 4e-025
Identities = 64/129 (49%), Positives = 85/129 (65%), Gaps = 6/129 (4%)
Frame = +3
Query: 246 NLDSLDLKINPYSTNKYINYLVNIAVARSLRKLRVEMVCGSFEFPKSLFIHSNLGTVILE 425
+++SL LKINP +TNK I LVN+AVARS+R+LR+EM+C +FE PKS ++ S L TVIL+
Sbjct: 78 SVESLQLKINPSATNKDIQSLVNMAVARSMRELRIEMICKNFELPKSFYMFSQLETVILD 137
Query: 426 KVSLEDPPLDARFVCLKSLHLLSVRFSSDESVETLLSRCPVLEDLVV----GRSSFTNVM 593
KVSL DPP D CLK LHLLSV ++ + T+ P L L + G+S V
Sbjct: 138 KVSLMDPPPDVHLPCLKRLHLLSVNSLTNVMIFTI--DVPTLRILSIDNTSGKSRPKGVH 195
Query: 594 VFTIDVPTL 620
F I+ P+L
Sbjct: 196 GFVINTPSL 204
Score = 73 bits (177), Expect = 2e-013
Identities = 32/52 (61%), Positives = 45/52 (86%)
Frame = +3
Query: 27 EKKKKKEIRSMSEFPDELLLKMLNLLPTKDAVATSVLSKRWISLWKEMNAFR 182
++ +K+IR++SEFPD++LLK+L+LLP+KD VAT VLSKRW SLWK++ FR
Sbjct: 24 QENMEKKIRTISEFPDKVLLKILSLLPSKDVVATGVLSKRWRSLWKDVKTFR 75
Score = 68 bits (165), Expect = 4e-012
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +3
Query: 573 SSFTNVMVFTIDVPTLRSLCVDNSVGESRPESVHGFVIRTPSL 701
+S TNVM+FTIDVPTLR L +DN+ G+SRP+ VHGFVI TPSL
Sbjct: 162 NSLTNVMIFTIDVPTLRILSIDNTSGKSRPKGVHGFVINTPSL 204
>TAIR9_protein||AT5G56420.1 | Symbols: | F-box family protein |
chr5:22850863-22852334 REVERSE
Length = 423
Score = 92 bits (226), Expect = 4e-019
Identities = 60/165 (36%), Positives = 89/165 (53%), Gaps = 5/165 (3%)
Frame = +3
Query: 222 ALFITKLLNLDSLDLKINP--YSTNKYINYLVNIAVARSLRKLRVEMVCGS--FEFPKSL 389
+L + K L+SL++KI ++ K + V I V R +R+L V G PK L
Sbjct: 69 SLLLHKAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRFVRELSVSYCSGEEPIRLPKCL 128
Query: 390 FIHSNLGTVILEKVSLEDPPLDARFVCLKSLHLLSVRFSSDESVETLLSRCPVLEDLVVG 569
F S L + LE ++LED F LK+LHLL V++ D+S+ ++S C LEDLVV
Sbjct: 129 FTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYLDDQSLPRIISSCSSLEDLVVQ 188
Query: 570 RSSFTNVMVFTIDVPTLRSLCVDNSVGESRPESVHGFVIRTPSLR 704
R NV V T+ P+L++L + S ++ GF+I TP L+
Sbjct: 189 RCPGDNVKVVTVTAPSLKTLSLHKS-SQAFEGDDDGFLIDTPKLK 232
>TAIR9_protein||AT5G56420.2 | Symbols: | F-box family protein |
chr5:22850863-22852334 REVERSE
Length = 423
Score = 92 bits (226), Expect = 4e-019
Identities = 60/165 (36%), Positives = 89/165 (53%), Gaps = 5/165 (3%)
Frame = +3
Query: 222 ALFITKLLNLDSLDLKINP--YSTNKYINYLVNIAVARSLRKLRVEMVCGS--FEFPKSL 389
+L + K L+SL++KI ++ K + V I V R +R+L V G PK L
Sbjct: 69 SLLLHKAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRFVRELSVSYCSGEEPIRLPKCL 128
Query: 390 FIHSNLGTVILEKVSLEDPPLDARFVCLKSLHLLSVRFSSDESVETLLSRCPVLEDLVVG 569
F S L + LE ++LED F LK+LHLL V++ D+S+ ++S C LEDLVV
Sbjct: 129 FTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYLDDQSLPRIISSCSSLEDLVVQ 188
Query: 570 RSSFTNVMVFTIDVPTLRSLCVDNSVGESRPESVHGFVIRTPSLR 704
R NV V T+ P+L++L + S ++ GF+I TP L+
Sbjct: 189 RCPGDNVKVVTVTAPSLKTLSLHKS-SQAFEGDDDGFLIDTPKLK 232
>TAIR9_protein||AT5G56560.1 | Symbols: | F-box family protein |
chr5:22899724-22901985 FORWARD
Length = 608
Score = 91 bits (223), Expect = 8e-019
Identities = 59/139 (42%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Frame = +3
Query: 249 LDSLDLKINPYSTNKYINYLVNIAVARSLRKLRVEMVCGSFEFPKSLFIHSNLGTVILEK 428
LD L LK+N + IN+ V +AV RS+R+LR+++ + E P L L + L
Sbjct: 79 LDRLHLKLNQKYSASDINFWVQVAVNRSVRELRIDLFGKTLELPCCLCSCITLKELTLHD 138
Query: 429 VSLEDPPLDARFVCLKSLHLLSVRFSSDESVETLLSRCPVLEDLVVGRSSFTNVMVFTID 608
+ ++ P R LK+LHLLSV+FSSD V ++L CPVLE LVV + NV + +D
Sbjct: 139 LCIKVVPAWFRLPSLKTLHLLSVKFSSDGFVASILRICPVLERLVVDGTKGVNVKIPNMD 198
Query: 609 VPTLRSLCVDNSVGESRPE 665
VP LRSL S GE R E
Sbjct: 199 VPNLRSLSF-RSTGELRIE 216
Score = 85 bits (208), Expect = 4e-017
Identities = 56/135 (41%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Frame = +3
Query: 300 NYLVNIAVARSLRKLRVEMVCGSFEFPKSLFIHSNLGTVILEKVSLEDPPLDARFVCLKS 479
N ++ SLR L + SL L +IL ++S++ P L++
Sbjct: 285 NVMIPNIYVPSLRSLSIRS-SRELRIDLSLKTFRTLKELILHELSIKVVPPSFSLPSLEA 343
Query: 480 LHLLSVRFSSDESVETLLSRCPVLEDLVVGRSSFTNVMVFTIDVPTLRSLCVDNSVGE-S 656
LHLLSV+F DESV +LL CPVLE LVV + NVM+ IDVPTLR+L + NS G+ +
Sbjct: 344 LHLLSVKFFGDESVASLLKICPVLEHLVVDQIKNENVMITNIDVPTLRNLSIRNSKGKGT 403
Query: 657 RPESVHGFVIRTPSL 701
E GFVI+ PSL
Sbjct: 404 YVEGSKGFVIKAPSL 418
>TAIR9_protein||AT5G50270.1 | Symbols: | F-box family protein |
chr5:20457487-20458873 FORWARD
Length = 382
Score = 87 bits (215), Expect = 7e-018
Identities = 59/170 (34%), Positives = 92/170 (54%), Gaps = 6/170 (3%)
Frame = +3
Query: 222 ALFITKLLNLDSLDLKINPYSTNKYINYLVNIAVARSLRKLRVEMVCGSFE----FPKSL 389
+LF+ K +++L K+ N I + + A R+L +E+ C + P+SL
Sbjct: 66 SLFMRKAPGIETLHFKLGQNCGNGDIQWWIRAASKFCFRELIIEINCSTSASPSILPRSL 125
Query: 390 FIHSN-LGTVILEKVSLEDPPLDARFVCLKSLHLLSVRFSSDESVETLLSRCPVLEDLVV 566
+ L T+ L+K L D F LK+L L+SV++ +E V++LLS C VLEDLVV
Sbjct: 126 YTECRMLVTLKLKKAVLVDVSSPTCFPSLKNLSLVSVKYPGNEFVKSLLSSCHVLEDLVV 185
Query: 567 GRSSFTNVMVFTIDVPTLRSLCVDNSVGESRPESVHGFVIRTPSLRWFSI 716
+ NV +F++ VP+L+SL + S E P+ GFV+ PSL + I
Sbjct: 186 EQCINDNVTIFSVKVPSLKSLVLRTS-KERAPDGESGFVVEAPSLEYLDI 234
>TAIR9_protein||AT3G26930.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro
DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G13965.1); Has 678 Blast
hits to 661 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa -
21; Fungi - 0; Plants - 651; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink). | chr3:9925931-9927351 FORWARD
Length = 410
Score = 87 bits (213), Expect = 1e-017
Identities = 76/204 (37%), Positives = 104/204 (50%), Gaps = 17/204 (8%)
Frame = +3
Query: 129 SVLSKRWISLWKEMNAFRYDG----STVGRVYWGFALFITKLLNLDSLDLKIN-PYSTNK 293
SVLSKRW SLWK + ++D V R L + L SL L I+ + ++
Sbjct: 2 SVLSKRWRSLWKMLPRLKFDDWMFPDNVNR-----CLLSHQASFLQSLHLVIDYDFVSHM 56
Query: 294 YINYLVNIAVARSLRKLRVEMVCG---SFEFPKSLFIHSNLGTVILEKVSLEDPPLDARF 464
+ L+ IA R +R+L V V G SF FP SL +L T+ L L D P
Sbjct: 57 HTGILMGIAFGRHIREL-VLYVNGFQESFTFPLSLCNCESLETLTLGHNVLIDVPSPVFL 115
Query: 465 VCLKSLHLLSVRFSSDESVETLLSRCPVLEDLVVGRSSFTNVMVFTIDVPTLRSLCVDNS 644
L++LHL V ++ DESV LLS C LE+LVV R +V FTI VP+L+ L +
Sbjct: 116 KSLRTLHLDGVEYTDDESVVNLLSGCISLENLVVHRVIQADVTTFTIAVPSLKRLTLTTE 175
Query: 645 VGESRPESVHGFVIRTPSLRWFSI 716
+ +SV +VI PSL++ I
Sbjct: 176 FDDDE-DSV--YVINAPSLKYLKI 196
>TAIR9_protein||AT3G50710.1 | Symbols: | F-box family protein |
chr3:18845199-18846673 REVERSE
Length = 428
Score = 86 bits (210), Expect = 3e-017
Identities = 56/188 (29%), Positives = 103/188 (54%), Gaps = 11/188 (5%)
Frame = +3
Query: 177 FRYDGSTVGRV--YWGFALFITKLLNLDSLDLKINPYSTNKYINYLVNIAVARSLRKLRV 350
F + S GR Y ++ + + L+++ + P +++ I + I + R++R+L +
Sbjct: 50 FELEPSYYGRFLKYVDKSMVLNRAQVLETVKFNVGPCCSSEDIATWIRIGMVRNMRELEI 109
Query: 351 EMVCG------SFEFPKSLFIHSNLGTVILEKVSLEDPPLDARFVCLKSLHLLSVRFSSD 512
G S + PKSL+ + L + L + + P+D F LKSLHL+ V + +
Sbjct: 110 SHCEGYFREHRSIKLPKSLYTYEKLEVLKLASTVVLNVPIDVCFPSLKSLHLVCVEYKTK 169
Query: 513 ESVETLLSRCPVLEDLVVGRS-SFTNVMVFTIDVPTLRSLCVDNSVGESRPESVHGFVIR 689
+S LLS CPVLE+LV+ +S + +V F +++PTL+SL + ++ GE + FV+
Sbjct: 170 KSHRRLLSGCPVLEELVLDKSYNSFHVRSFYVEIPTLQSLSILDTSGELYGDFT--FVVN 227
Query: 690 TPSLRWFS 713
P+L++F+
Sbjct: 228 APALKYFN 235
>TAIR9_protein||AT4G13965.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich
repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match
is: F-box family protein (TAIR:AT1G55030.1); Has 1305 Blast hits to
1279 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 2;
Fungi - 4; Plants - 1281; Viruses - 0; Other Eukaryotes - 14 (source:
NCBI BLink). | chr4:8066138-8067435 REVERSE
Length = 377
Score = 82 bits (202), Expect = 2e-016
Identities = 63/166 (37%), Positives = 88/166 (53%), Gaps = 4/166 (2%)
Frame = +3
Query: 222 ALFITKLLNLDSLDLKINPYSTNKY-INYLVNIAVARSLRKLRVEMVCGSFEFPKSLFIH 398
AL K L SL L ++ + N L+ IA A +LRKL +E+ G F P+SL+
Sbjct: 26 ALLSHKAPVLHSLHLIVHLHLCNSMNTAKLIGIAFACNLRKLVLEVDGGRFSIPESLYNC 85
Query: 399 SNLGTVILEKVSLEDPPLDARFVCLKSLHLLSVRFSSDESVETLLSRCPVLEDLVVGRSS 578
L T+ L+ L D P L++LHL V F +ES LLS CP LE+LVV R
Sbjct: 86 ETLDTLELKYSILMDVPSSICLKSLRTLHLHYVDFKDNESALNLLSGCPNLENLVVHRYP 145
Query: 579 FTNVMVFTIDVPTLRSLCVDNSVGESRPESVHGFVIRTPSLRWFSI 716
F++V +TI V +L+ L + S S + G+VI +PSL + I
Sbjct: 146 FSSVKTYTIAVSSLKRLTIYTS---STVDPRAGYVINSPSLTYLKI 188
>TAIR9_protein||AT3G26920.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED
DURING: 4 anthesis, C globular stage, petal differentiation and
expansion stage, E expanded cotyledon stage; CONTAINS InterPro
DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G13965.1); Has 1853 Blast
hits to 1457 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa
- 2; Fungi - 2; Plants - 1849; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr3:9921241-9922429 FORWARD
Length = 341
Score = 79 bits (193), Expect = 2e-015
Identities = 54/138 (39%), Positives = 77/138 (55%), Gaps = 5/138 (3%)
Frame = +3
Query: 306 LVNIAVARSLRKLRVEMVCGS-FEFPKSLFIHSNLGTVILEKVSLEDPPLDARFVCLKSL 482
L+ IA R LRKL +++ G F+FP SL+ L T+ L L D P L++L
Sbjct: 15 LIGIAFGRQLRKLVLKVYSGDWFKFPTSLYNSETLETLELYHCILIDVPFPVCLKSLRTL 74
Query: 483 HLLSVRFSSDESVETLLSRCPVLEDLVVGRSSFTNVMVFTIDVPTLRSLCVDNSVGESRP 662
+L V F +DESV LL+ C LE+LV+ +++ NV FTI VP+L+ L +V
Sbjct: 75 NLHEVEFVNDESVVNLLAGCISLENLVIHQTTDLNVKTFTIAVPSLQRL----TVIVEYY 130
Query: 663 ESVHGFVIRTPSLRWFSI 716
E FV+ TPSL++ I
Sbjct: 131 EEFSVFVVNTPSLKYLKI 148
>TAIR9_protein||AT5G56430.1 | Symbols: | F-box family protein |
chr5:22853323-22854575 REVERSE
Length = 361
Score = 76 bits (186), Expect = 2e-014
Identities = 46/98 (46%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = +3
Query: 426 KVSLEDPPLDARFVCLKSLHLLSVRFSSDESVETLLSRCPVLEDLVVGRSSFTNVMVFTI 605
K+++ED F +K+L LL V+FSSD++VE LLS P+LE LVV R NV F I
Sbjct: 71 KLTIEDVHSTTCFRSVKNLSLLDVKFSSDKTVERLLSCFPILETLVVHRWGADNVKTFAI 130
Query: 606 DVPTLRSLCVDNSV-GESRPESVHGFVIRTPSLRWFSI 716
VP+L+SL + +V G P++ HGFVI PSL+ I
Sbjct: 131 CVPSLQSLNIRYTVGGYHNPKTDHGFVINAPSLKHLDI 168
>TAIR9_protein||AT5G56400.1 | Symbols: | F-box family protein |
chr5:22846069-22847615 REVERSE
Length = 456
Score = 72 bits (176), Expect = 2e-013
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 3/167 (1%)
Frame = +3
Query: 222 ALFITKLLNLDSLDLKINPYSTNKYINYLVNIAVARSLRKLRVEMV--CGSFEFPKSLFI 395
+L + K L SL L + P T I + +A+ R++ +L ++ G + L
Sbjct: 98 SLILHKAPTLVSLRLSVGPKCTADDIGLWIKLALDRNICELIIKHYPDHGHIRLSRRLCD 157
Query: 396 HSNLGTVILEKVSLEDPPLDARFVCLKSLHLLSVRFSSDESVETLLSRCPVLEDLVVGRS 575
L ++ L+ L L F+ LK+LHL V++S DESV TL+S CP L +LVV R
Sbjct: 158 SKTLVSLKLKNAILGAIWLPTCFISLKTLHLRYVKYSGDESVRTLISSCPSLRNLVVKRH 217
Query: 576 SFTNVMVFTIDVPTLRSLCVDNSVGESRPESVHGFVIRTPSLRWFSI 716
+ NV F I V L+SL V S +S +VI TP+L++ +I
Sbjct: 218 NEDNVKRFAIIVRYLQSLTVYLSPLHGVADS-DAYVINTPNLKYLNI 263
>TAIR9_protein||AT1G32375.1 | Symbols: | F-box family protein |
chr1:11679230-11680679 FORWARD
Length = 423
Score = 71 bits (172), Expect = 7e-013
Identities = 49/121 (40%), Positives = 66/121 (54%), Gaps = 8/121 (6%)
Frame = +3
Query: 366 SFEFPKSLFIHSN-LGTVILEKVSLEDPPLDARFVCLKSLHLLSVRFSSDESVETLLSRC 542
S P+SL+ L T+ L L D F LK+L L+S++F DE ++ LLS C
Sbjct: 119 SVVLPRSLYTCCRMLVTLKLNNAVLVDATSSFSFPSLKTLSLVSMKFPGDELIKMLLSNC 178
Query: 543 PVLEDLVVGRSSFTNVMVFTIDVPTLRSLCVDNSVGESRPESVH---GFVIRTPSLRWFS 713
PVLEDLVV R + NV FT+ V +L+ L + E+ S++ GFVI TPSL
Sbjct: 179 PVLEDLVVKRCPYDNVTTFTVRVSSLKCLVLH----ETELASINADCGFVIDTPSLECLD 234
Query: 714 I 716
I
Sbjct: 235 I 235
>TAIR9_protein||AT5G56390.1 | Symbols: | F-box family protein |
chr5:22842790-22844273 REVERSE
Length = 429
Score = 70 bits (171), Expect = 9e-013
Identities = 44/108 (40%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Frame = +3
Query: 393 IHSNLGTVILEKVSLEDPPLDARFVCLKSLHLLSVRFSSDESVETLLSRCPVLEDLVVGR 572
+H L + L+ V L D F LK L L SV++ +E V L+S CPVLEDLVV +
Sbjct: 131 VHIMLADLKLQNVVLVDVSTPVSFPSLKRLRLKSVKYPGNEFVNNLISSCPVLEDLVVKQ 190
Query: 573 SSFTNVMVFTIDVPTLRSLCVDNSVGESRPESVHGFVIRTPSLRWFSI 716
S NV + T+ VP+L+ L + E + H FVI TPSL I
Sbjct: 191 CSDDNVTILTVRVPSLKRLSLIQR-AELEIDVPHDFVIDTPSLEHLKI 237
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,351,794,319
Number of Sequences: 33410
Number of Extensions: 22351794319
Number of Successful Extensions: 702452299
Number of sequences better than 0.0: 0
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