BLASTX 7.6.2
Query= UN46574 /QuerySize=628
(627 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G37190.1 | Symbols: | 60S ribosomal protein L... 102 2e-022
TAIR9_protein||AT3G53430.1 | Symbols: | 60S ribosomal protein L... 102 2e-022
TAIR9_protein||AT5G60670.1 | Symbols: | 60S ribosomal protein L... 89 3e-018
>TAIR9_protein||AT2G37190.1 | Symbols: | 60S ribosomal protein L12 (RPL12A) |
chr2:15619559-15620059 REVERSE
Length = 167
Score = 102 bits (254), Expect = 2e-022
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +3
Query: 189 RVMRPRSIAK*LSGTVREILGTCVSVGCTVDGKDPKDIQQEIQEGEVEIPEN* 347
R+MRPRSIAK LSGTVREILGTCVSVGCTVDGKDPKDIQQEIQ+GEVEIPEN*
Sbjct: 115 RIMRPRSIAKELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIPEN* 167
Score = 85 bits (209), Expect = 3e-017
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 64 MPPKLDPTAIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIG 192
MPPKLDP+ IVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIG
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIG 43
>TAIR9_protein||AT3G53430.1 | Symbols: | 60S ribosomal protein L12 (RPL12B) |
chr3:19809895-19810395 REVERSE
Length = 167
Score = 102 bits (254), Expect = 2e-022
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = +3
Query: 189 RVMRPRSIAK*LSGTVREILGTCVSVGCTVDGKDPKDIQQEIQEGEVEIPEN* 347
R+MRPRSIAK LSGTVREILGTCVSVGCTVDGKDPKD+QQEIQEGE+EIPEN*
Sbjct: 115 RIMRPRSIAKELSGTVREILGTCVSVGCTVDGKDPKDLQQEIQEGEIEIPEN* 167
Score = 85 bits (209), Expect = 3e-017
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 64 MPPKLDPTAIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIG 192
MPPKLDP+ IVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIG
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIG 43
>TAIR9_protein||AT5G60670.1 | Symbols: | 60S ribosomal protein L12 (RPL12C) |
chr5:24381066-24381566 REVERSE
Length = 167
Score = 89 bits (218), Expect = 3e-018
Identities = 39/53 (73%), Positives = 47/53 (88%)
Frame = +3
Query: 189 RVMRPRSIAK*LSGTVREILGTCVSVGCTVDGKDPKDIQQEIQEGEVEIPEN* 347
++MRPRSIAK LSGTV+EILGTCVSVGCTVDGKDPKD+Q+EI G+++IP *
Sbjct: 115 KIMRPRSIAKELSGTVKEILGTCVSVGCTVDGKDPKDLQEEINSGDIDIPNE* 167
Score = 85 bits (209), Expect = 3e-017
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 64 MPPKLDPTAIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIG 192
MPPKLDP+ IVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIG
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIG 43
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,351,794,319
Number of Sequences: 33410
Number of Extensions: 22351794319
Number of Successful Extensions: 702452299
Number of sequences better than 0.0: 0
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