BLASTX 7.6.2
Query= UN46585 /QuerySize=771
(770 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 229 2e-060
TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 225 3e-059
TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 224 5e-059
TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 220 8e-058
TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 216 1e-056
TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 179 2e-045
TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 153 1e-037
TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 153 1e-037
TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 148 5e-036
TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 142 3e-034
TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 141 6e-034
TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 141 6e-034
TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 |... 111 5e-025
TAIR9_protein||AT2G34450.1 | Symbols: | high mobility group (HM... 99 3e-021
TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcripti... 99 3e-021
TAIR9_protein||AT2G34450.2 | Symbols: | high mobility group (HM... 95 5e-020
TAIR9_protein||AT4G23800.1 | Symbols: | high mobility group (HM... 75 5e-014
TAIR9_protein||AT4G11080.1 | Symbols: | high mobility group (HM... 72 3e-013
>TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181174 FORWARD
Length = 142
Score = 229 bits (582), Expect = 2e-060
Identities = 115/143 (80%), Positives = 129/143 (90%), Gaps = 3/143 (2%)
Frame = +2
Query: 101 MKGGNSKADSRNSKLSVNKKPTKASKAAAAGKDPNKPKRPASAFFVFMEDFRQTYKKENP 280
MKG SKA++R++KLSV KKP K +K AA KDPNKPKRP+SAFFVFMEDFR TYK+E+P
Sbjct: 1 MKGAKSKAETRSTKLSVTKKPAKGAKGAA--KDPNKPKRPSSAFFVFMEDFRVTYKEEHP 58
Query: 281 NNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKTMKAYNKNLEEGPKEDEESD 460
NKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEK MKAYNK LEEGPKEDEES
Sbjct: 59 KNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEES- 117
Query: 461 DKSVSDVSEEEDADDKSDEEEDD 529
DKSVS+V++E+DA+D S+EEEDD
Sbjct: 118 DKSVSEVNDEDDAEDGSEEEEDD 140
>TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 145
Score = 225 bits (572), Expect = 3e-059
Identities = 112/144 (77%), Positives = 127/144 (88%), Gaps = 2/144 (1%)
Frame = +2
Query: 101 MKGGNSKADSRNSKLSVNKKPTK-ASKAAAAGKDPNKPKRPASAFFVFMEDFRQTYKKEN 277
MKG SK ++R+SKLSV KKP K A + AA KDPNKPKRPASAFFVFMEDFR+T+KKEN
Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60
Query: 278 PNNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKTMKAYNKNLEEGPKEDEES 457
P NKSVA VGKA G+KWKSLSDSEKAPYVAKA+KRKVEYEK +KAYNK LEEGPKEDEES
Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEES 120
Query: 458 DDKSVSDVSEEEDADDKSDEEEDD 529
DKSVS+V++E+DA+D S+EEEDD
Sbjct: 121 -DKSVSEVNDEDDAEDGSEEEEDD 143
>TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 144
Score = 224 bits (570), Expect = 5e-059
Identities = 111/145 (76%), Positives = 127/145 (87%), Gaps = 2/145 (1%)
Frame = +2
Query: 101 MKGGNSKADSRNSKLSVNKKPTK-ASKAAAAGKDPNKPKRPASAFFVFMEDFRQTYKKEN 277
MKG SK ++R+SKLSV KKP K A + AA KDPNKPKRPASAFFVFMEDFR+T+KKEN
Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60
Query: 278 PNNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKTMKAYNKNLEEGPKEDEES 457
P NKSVA VGKA G+KWKSLSDSEKAPYVAKA+KRKVEYEK +KAYNK LEEGPKEDEES
Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEES 120
Query: 458 DDKSVSDVSEEEDADDKSDEEEDD* 532
DKSVS+V++E+DA+D S+EE+DD*
Sbjct: 121 -DKSVSEVNDEDDAEDGSEEEDDD* 144
>TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 143
Score = 220 bits (560), Expect = 8e-058
Identities = 109/143 (76%), Positives = 126/143 (88%), Gaps = 2/143 (1%)
Frame = +2
Query: 101 MKGGNSKADSRNSKLSVNKKPTK-ASKAAAAGKDPNKPKRPASAFFVFMEDFRQTYKKEN 277
MKG SK ++R+SKLSV KKP K A + AA KDPNKPKRPASAFFVFMEDFR+T+KKEN
Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60
Query: 278 PNNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKTMKAYNKNLEEGPKEDEES 457
P NKSVA VGKA G+KWKSLSDSEKAPYVAKA+KRKVEYEK +KAYNK LEEGPKEDEES
Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEES 120
Query: 458 DDKSVSDVSEEEDADDKSDEEED 526
DKSVS+V++E+DA+D S+E++D
Sbjct: 121 -DKSVSEVNDEDDAEDGSEEDDD 142
>TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181170 FORWARD
Length = 141
Score = 216 bits (550), Expect = 1e-056
Identities = 109/137 (79%), Positives = 123/137 (89%), Gaps = 3/137 (2%)
Frame = +2
Query: 107 GGNSKADSRNSKLSVNKKPTKASKAAAAGKDPNKPKRPASAFFVFMEDFRQTYKKENPNN 286
G SKA++R++KLSV KKP K +K AA KDPNKPKRP+SAFFVFMEDFR TYK+E+P N
Sbjct: 3 GAKSKAETRSTKLSVTKKPAKGAKGAA--KDPNKPKRPSSAFFVFMEDFRVTYKEEHPKN 60
Query: 287 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKTMKAYNKNLEEGPKEDEESDDK 466
KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEK MKAYNK LEEGPKEDEES DK
Sbjct: 61 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEES-DK 119
Query: 467 SVSDVSEEEDADDKSDE 517
SVS+V++E+DA+D S+E
Sbjct: 120 SVSEVNDEDDAEDGSEE 136
>TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181193 FORWARD
Length = 148
Score = 179 bits (453), Expect = 2e-045
Identities = 89/109 (81%), Positives = 97/109 (88%), Gaps = 2/109 (1%)
Frame = +2
Query: 101 MKGGNSKADSRNSKLSVNKKPTKASKAAAAGKDPNKPKRPASAFFVFMEDFRQTYKKENP 280
MKG SKA++R++KLSV KKP K +K AA KDPNKPKRP+SAFFVFMEDFR TYK+E+P
Sbjct: 1 MKGAKSKAETRSTKLSVTKKPAKGAKGAA--KDPNKPKRPSSAFFVFMEDFRVTYKEEHP 58
Query: 281 NNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKTMKAYNKNL 427
NKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEK MKAYNK L
Sbjct: 59 KNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKL 107
>TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 153 bits (386), Expect = 1e-037
Identities = 82/140 (58%), Positives = 99/140 (70%), Gaps = 19/140 (13%)
Frame = +2
Query: 155 KKPTK--ASKAAAAGKDPNKPKRPASAFFVFMEDFRQTYKKENPNNKSVAAVGKAGGEKW 328
+KPTK K A KDPNKPKR SAFFVF+EDFR T+KKENPN K+V+AVGKAGG+KW
Sbjct: 33 EKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKW 92
Query: 329 KSLSDSEKAPYVAKADKRKVEYEKTMKAYNKNLEEGPKEDEESDDKSVSDVSEEEDA--- 499
KS+S +EKAPY KA KRK EYEK M AYNKNLEEG E E KS S++++E++A
Sbjct: 93 KSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEGSDESE----KSRSEINDEDEASGE 148
Query: 500 ----------DDKSDEEEDD 529
DD+ +EEE+D
Sbjct: 149 EELLEKEAAGDDEEEEEEED 168
>TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 153 bits (386), Expect = 1e-037
Identities = 82/140 (58%), Positives = 99/140 (70%), Gaps = 19/140 (13%)
Frame = +2
Query: 155 KKPTK--ASKAAAAGKDPNKPKRPASAFFVFMEDFRQTYKKENPNNKSVAAVGKAGGEKW 328
+KPTK K A KDPNKPKR SAFFVF+EDFR T+KKENPN K+V+AVGKAGG+KW
Sbjct: 33 EKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKW 92
Query: 329 KSLSDSEKAPYVAKADKRKVEYEKTMKAYNKNLEEGPKEDEESDDKSVSDVSEEEDA--- 499
KS+S +EKAPY KA KRK EYEK M AYNKNLEEG E E KS S++++E++A
Sbjct: 93 KSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEGSDESE----KSRSEINDEDEASGE 148
Query: 500 ----------DDKSDEEEDD 529
DD+ +EEE+D
Sbjct: 149 EELLEKEAAGDDEEEEEEED 168
>TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 186
Score = 148 bits (372), Expect = 5e-036
Identities = 76/117 (64%), Positives = 90/117 (76%), Gaps = 6/117 (5%)
Frame = +2
Query: 155 KKPTK--ASKAAAAGKDPNKPKRPASAFFVFMEDFRQTYKKENPNNKSVAAVGKAGGEKW 328
+KPTK K A KDPNKPKR SAFFVF+EDFR T+KKENPN K+V+AVGKAGG+KW
Sbjct: 33 EKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKW 92
Query: 329 KSLSDSEKAPYVAKADKRKVEYEKTMKAYNKNLEEGPKEDEESDDKSVSDVSEEEDA 499
KS+S +EKAPY KA KRK EYEK M AYNKNLEEG E E KS S++++E++A
Sbjct: 93 KSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEGSDESE----KSRSEINDEDEA 145
>TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 135
Score = 142 bits (357), Expect = 3e-034
Identities = 69/133 (51%), Positives = 90/133 (67%), Gaps = 2/133 (1%)
Frame = +2
Query: 107 GGNSKADSRNSKLSVNKKPTKASKAAAAGKDPNKPKRPASAFFVFMEDFRQTYKKENPNN 286
GG SKA++ ++ + + KA K KDPN+PKRP SAFFVF+EDFR+ + NPNN
Sbjct: 3 GGESKAEATSTDQRLKTRGRKAGKKTK--KDPNQPKRPPSAFFVFLEDFRKEFNLANPNN 60
Query: 287 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKTMKAYNKNLEEGPKEDEESDDK 466
KSVA VGKA G +WK+++D +KAPYVAKA+ RK EY K ++ YN L G +E+ DK
Sbjct: 61 KSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDK 120
Query: 467 SVSDVSEEEDADD 505
S S+V E E DD
Sbjct: 121 SKSEVDEAEAEDD 133
>TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 139
Score = 141 bits (354), Expect = 6e-034
Identities = 70/136 (51%), Positives = 93/136 (68%), Gaps = 5/136 (3%)
Frame = +2
Query: 107 GGNSKADSRNSKLSVNKKPTKASKAAAAGKDPNKPKRPASAFFVFMEDFRQTYKKENPNN 286
GG SKA++ ++ + + KA K KDPN+PKRP SAFFVF+EDFR+ + NPNN
Sbjct: 3 GGESKAEATSTDQRLKTRGRKAGKKTK--KDPNQPKRPPSAFFVFLEDFRKEFNLANPNN 60
Query: 287 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKTMKAYNKNLEEGPKEDEESDDK 466
KSVA VGKA G +WK+++D +KAPYVAKA+ RK EY K ++ YN L G +E+ DK
Sbjct: 61 KSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDK 120
Query: 467 SVSDVSE---EEDADD 505
S S+V E EE+A+D
Sbjct: 121 SKSEVDEAVSEEEAED 136
>TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 139
Score = 141 bits (354), Expect = 6e-034
Identities = 70/136 (51%), Positives = 93/136 (68%), Gaps = 5/136 (3%)
Frame = +2
Query: 107 GGNSKADSRNSKLSVNKKPTKASKAAAAGKDPNKPKRPASAFFVFMEDFRQTYKKENPNN 286
GG SKA++ ++ + + KA K KDPN+PKRP SAFFVF+EDFR+ + NPNN
Sbjct: 3 GGESKAEATSTDQRLKTRGRKAGKKTK--KDPNQPKRPPSAFFVFLEDFRKEFNLANPNN 60
Query: 287 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKTMKAYNKNLEEGPKEDEESDDK 466
KSVA VGKA G +WK+++D +KAPYVAKA+ RK EY K ++ YN L G +E+ DK
Sbjct: 61 KSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDK 120
Query: 467 SVSDVSE---EEDADD 505
S S+V E EE+A+D
Sbjct: 121 SKSEVDEAVSEEEAED 136
>TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 | HMGB5 (HIGH
MOBILITY GROUP B 5); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor |
chr4:16887363-16888184 REVERSE
Length = 126
Score = 111 bits (277), Expect = 5e-025
Identities = 50/116 (43%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Frame = +2
Query: 137 SKLSVNKKPTKASKAAAAGKDPNKPKRPASAFFVFMEDFRQTYKKENPNNKSVAAVGKAG 316
S+ + ++ + +K KDPN+PK+P S FFVF++DFR+ + NP+NKSV VG+A
Sbjct: 10 SRSTDDRLKVRGNKVGKKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAA 69
Query: 317 GEKWKSLSDSEKAPYVAKADKRKVEYEKTMKAYNKNLEEGPKE--DEESDDKSVSD 478
G+KWK++++ E+AP+VAK+ +K EY TM+ YN L G K D+E +K+ D
Sbjct: 70 GKKWKTMTEEERAPFVAKSQSKKTEYAVTMQQYNMELANGNKTTGDDEKQEKAADD 125
>TAIR9_protein||AT2G34450.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr2:14527918-14529448 REVERSE
Length = 152
Score = 99 bits (245), Expect = 3e-021
Identities = 50/135 (37%), Positives = 76/135 (56%), Gaps = 1/135 (0%)
Frame = +2
Query: 59 SSSSSSSSSRNRE-TMKGGNSKADSRNSKLSVNKKPTKASKAAAAGKDPNKPKRPASAFF 235
S S S SSRN E +K S +L +KP + K PK+PA+AFF
Sbjct: 12 SPSCSGGSSRNLELAVKSSEGARRSTRLRLQPLRKPKTSPKKKPVKLQTKMPKKPATAFF 71
Query: 236 VFMEDFRQTYKKENPNNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKTMKAY 415
F++DFR+ Y++ENP+ KS+ +GK GEKWK+++ EK Y A +++ E+ + M Y
Sbjct: 72 FFLDDFRKQYQEENPDVKSMREIGKTCGEKWKTMTYEEKVKYYDIATEKREEFHRAMTEY 131
Query: 416 NKNLEEGPKEDEESD 460
K +E G ++ E+D
Sbjct: 132 TKRMESGAHDESETD 146
>TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcription factor |
chr5:7888712-7890111 REVERSE
Length = 242
Score = 99 bits (245), Expect = 3e-021
Identities = 57/147 (38%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Frame = +2
Query: 95 ETMKGGNSKADSRNSKLSVNKKPTKASKA---AAAGKDPNKPKRPASAFFVFMEDFRQTY 265
ET K + S KP + K + NKPKRP +AFF+FM DFR+T+
Sbjct: 74 ETQAEAKKKPAEKKKTTSDGPKPKRLKKTNDEKKSSSTSNKPKRPLTAFFIFMSDFRKTF 133
Query: 266 KKENPNNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKTMKAYNKNLEEGPKE 445
K E+ N K GGEKWKSL++ EK Y+ KA + K EY K++++ + + EE E
Sbjct: 134 KSEH-NGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAAELKAEYNKSLESNDADEEE---E 189
Query: 446 DEESDDKSVSDVSEEE-DADDKSDEEE 523
DEE V D E++ D DD+ +E+E
Sbjct: 190 DEEKQSDDVDDAEEKQVDDDDEVEEKE 216
>TAIR9_protein||AT2G34450.2 | Symbols: | high mobility group (HMG1/2) family
protein | chr2:14527918-14529448 REVERSE
Length = 153
Score = 95 bits (234), Expect = 5e-020
Identities = 50/136 (36%), Positives = 76/136 (55%), Gaps = 2/136 (1%)
Frame = +2
Query: 59 SSSSSSSSSRNRE-TMKGGNSKADSRNSKLSVNKKPTKASKAAAAGKDPNKPKRPASAFF 235
S S S SSRN E +K S +L +KP + K PK+PA+AFF
Sbjct: 12 SPSCSGGSSRNLELAVKSSEGARRSTRLRLQPLRKPKTSPKKKPVKLQTKMPKKPATAFF 71
Query: 236 VFMEDFRQTYKKENPNNKSV-AAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKTMKA 412
F++DFR+ Y++ENP+ KS+ +GK GEKWK+++ EK Y A +++ E+ + M
Sbjct: 72 FFLDDFRKQYQEENPDVKSMREVIGKTCGEKWKTMTYEEKVKYYDIATEKREEFHRAMTE 131
Query: 413 YNKNLEEGPKEDEESD 460
Y K +E G ++ E+D
Sbjct: 132 YTKRMESGAHDESETD 147
>TAIR9_protein||AT4G23800.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr4:12390228-12392516 FORWARD
Length = 457
Score = 75 bits (182), Expect = 5e-014
Identities = 42/91 (46%), Positives = 53/91 (58%), Gaps = 7/91 (7%)
Frame = +2
Query: 194 KDPNKPKRPASAFFVFMEDFRQTYKKENPNNKSVAAVGKAGGEKWKSLSDSEKAPYVAKA 373
KDP KPK P SAF V+ + R ++E NKSV V K GE+WK+LSD +KAPY A
Sbjct: 250 KDPLKPKHPVSAFLVYANERRAALREE---NKSVVEVAKITGEEWKNLSDKKKAPYEKVA 306
Query: 374 DKRKVEYEKTMKAYNKNLEE----GPKEDEE 454
K K Y + M+ Y + EE KE+EE
Sbjct: 307 KKNKETYLQAMEEYKRTKEEEALSQKKEEEE 337
Score = 69 bits (168), Expect = 2e-012
Identities = 42/103 (40%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Frame = +2
Query: 119 KADSRNSKLSVNKKPTKASKAAAAGKDPNKPKRPASAFFVFMEDFRQTYKKENP--NNKS 292
K + L +K TK K DPNKPK+PAS++F+F +D R+ +E P NN +
Sbjct: 351 KKKEKTDNLIKKEKATKKKK--NENVDPNKPKKPASSYFLFSKDERKKLTEERPGTNNAT 408
Query: 293 VAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKTMKAYNK 421
V A+ KWK LS+ EK Y KA K Y+K ++AYNK
Sbjct: 409 VTALISL---KWKELSEEEKQVYNGKAAKLMEAYKKEVEAYNK 448
>TAIR9_protein||AT4G11080.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr4:6760898-6763272 REVERSE
Length = 447
Score = 72 bits (175), Expect = 3e-013
Identities = 42/97 (43%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Frame = +2
Query: 176 KAAAAGKDPNKPKRPASAFFVFMEDFRQTYKKENPNNKSVAAVGKAGGEKWKSLSDSEKA 355
K A KDP KPK+P SA+ ++ + R K E NKSV V K GE+WK+LS+ +KA
Sbjct: 235 KKAKKIKDPLKPKQPISAYLIYANERRAALKGE---NKSVIEVAKMAGEEWKNLSEEKKA 291
Query: 356 PYVAKADKRKVEYEKTMKAYNKNLEE----GPKEDEE 454
PY A K K Y + M+ Y + EE KE+EE
Sbjct: 292 PYDQMAKKNKEIYLQEMEGYKRTKEEEAMSQKKEEEE 328
Score = 62 bits (148), Expect = 5e-010
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Frame = +2
Query: 119 KADSRNSKLSVNKKPTKASKAAAAGKDPNKPKRPASAFFVFMEDFRQTYKKENP--NNKS 292
K + + K T +K DPNKPK+P S++F+F +D R++ +E+P NN +
Sbjct: 342 KKKEKTDNIIKKTKETAKNKKKNENVDPNKPKKPTSSYFLFCKDARKSVLEEHPGINNST 401
Query: 293 VAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKTMKAYNK 421
V A KW L + EK Y +KA + Y+K ++ YNK
Sbjct: 402 VTAHISL---KWMELGEEEKQVYNSKAAELMEAYKKEVEEYNK 441
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,351,794,319
Number of Sequences: 33410
Number of Extensions: 22351794319
Number of Successful Extensions: 702452299
Number of sequences better than 0.0: 0
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