BLASTX 7.6.2
Query= UN46614 /QuerySize=748
(747 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G37930.1 | Symbols: SHM1, STM, SHMT1 | SHM1 (S... 248 3e-066
TAIR9_protein||AT5G26780.1 | Symbols: SHM2 | SHM2 (SERINE HYDROX... 189 2e-048
TAIR9_protein||AT5G26780.3 | Symbols: SHM2 | SHM2 (SERINE HYDROX... 189 2e-048
TAIR9_protein||AT5G26780.2 | Symbols: SHM2 | SHM2 (SERINE HYDROX... 189 2e-048
TAIR9_protein||AT4G32520.1 | Symbols: SHM3 | SHM3 (SERINE HYDROX... 110 1e-024
TAIR9_protein||AT4G32520.2 | Symbols: SHM3 | SHM3 (SERINE HYDROX... 110 1e-024
TAIR9_protein||AT4G13930.1 | Symbols: SHM4 | SHM4 (serine hydrox... 108 5e-024
TAIR9_protein||AT4G13890.1 | Symbols: SHM5, EDA36, EDA37 | EDA36... 106 2e-023
TAIR9_protein||AT1G22020.1 | Symbols: SHM6 | SHM6 (serine hydrox... 103 1e-022
TAIR9_protein||AT1G36370.1 | Symbols: SHM7 | SHM7 (serine hydrox... 93 2e-019
>TAIR9_protein||AT4G37930.1 | Symbols: SHM1, STM, SHMT1 | SHM1 (SERINE
TRANSHYDROXYMETHYLTRANSFERASE 1); glycine hydroxymethyltransferase/
poly(U) binding | chr4:17831891-17834742 REVERSE
Length = 518
Score = 248 bits (633), Expect = 3e-066
Identities = 122/126 (96%), Positives = 125/126 (99%)
Frame = +2
Query: 35 MAMAMALRRLSSSVDKPIRPLIRSSSCYMSSLPSEAVDDKERSRVTWPKQLNASLEEVDP 214
MAMAMALRRLSSS+DKPIRPLIRS+SCYMSSLPSEAVD+KERSRVTWPKQLNA LEEVDP
Sbjct: 1 MAMAMALRRLSSSIDKPIRPLIRSTSCYMSSLPSEAVDEKERSRVTWPKQLNAPLEEVDP 60
Query: 215 EIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 394
EIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM
Sbjct: 61 EIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 120
Query: 395 AETLCQ 412
AETLCQ
Sbjct: 121 AETLCQ 126
Score = 132 bits (331), Expect = 3e-031
Identities = 67/72 (93%), Positives = 69/72 (95%)
Frame = +3
Query: 408 AKVAEYFDKAVKLALKVKSEAQGTKLKDFVSAMESSSGIQSEIAKLRHDVEEFAKQFPTI 587
AKVAEYFDKAV +ALKVKSEAQGTKLKDFVSAMESSS IQSEIAKLRH+VEEFAKQFPTI
Sbjct: 447 AKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAMESSSTIQSEIAKLRHEVEEFAKQFPTI 506
Query: 588 GFEKETMKYKN* 623
GFEKETMKYKN*
Sbjct: 507 GFEKETMKYKN* 518
>TAIR9_protein||AT5G26780.1 | Symbols: SHM2 | SHM2 (SERINE
HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr5:9418299-9421725 FORWARD
Length = 518
Score = 189 bits (478), Expect = 2e-048
Identities = 97/126 (76%), Positives = 109/126 (86%), Gaps = 2/126 (1%)
Frame = +2
Query: 41 MAMALRRLSSSVDKPIRPLIRS--SSCYMSSLPSEAVDDKERSRVTWPKQLNASLEEVDP 214
MA+ALRRLSSSV KPI L + S +MSSL + A+ + E+SR +W KQLNASL+E+DP
Sbjct: 1 MALALRRLSSSVKKPISLLSSNGGSLRFMSSLSTAAMAESEKSRSSWIKQLNASLDEIDP 60
Query: 215 EIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 394
E+ADIIE EKARQWKG ELIPSENFTS+SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM
Sbjct: 61 EVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 120
Query: 395 AETLCQ 412
AETLCQ
Sbjct: 121 AETLCQ 126
Score = 110 bits (273), Expect = 1e-024
Identities = 52/72 (72%), Positives = 64/72 (88%)
Frame = +3
Query: 408 AKVAEYFDKAVKLALKVKSEAQGTKLKDFVSAMESSSGIQSEIAKLRHDVEEFAKQFPTI 587
AKVAEYFD AVK+ALK+K+E+QGTKLKDFV+ M+S+ +QSE++KLR VEE+AKQFPTI
Sbjct: 447 AKVAEYFDLAVKIALKIKAESQGTKLKDFVATMQSNEKLQSEMSKLREMVEEYAKQFPTI 506
Query: 588 GFEKETMKYKN* 623
GFEKETM+YK *
Sbjct: 507 GFEKETMRYKE* 518
>TAIR9_protein||AT5G26780.3 | Symbols: SHM2 | SHM2 (SERINE
HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr5:9418299-9421725 FORWARD
Length = 534
Score = 189 bits (478), Expect = 2e-048
Identities = 97/126 (76%), Positives = 109/126 (86%), Gaps = 2/126 (1%)
Frame = +2
Query: 41 MAMALRRLSSSVDKPIRPLIRS--SSCYMSSLPSEAVDDKERSRVTWPKQLNASLEEVDP 214
MA+ALRRLSSSV KPI L + S +MSSL + A+ + E+SR +W KQLNASL+E+DP
Sbjct: 1 MALALRRLSSSVKKPISLLSSNGGSLRFMSSLSTAAMAESEKSRSSWIKQLNASLDEIDP 60
Query: 215 EIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 394
E+ADIIE EKARQWKG ELIPSENFTS+SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM
Sbjct: 61 EVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 120
Query: 395 AETLCQ 412
AETLCQ
Sbjct: 121 AETLCQ 126
Score = 110 bits (273), Expect = 1e-024
Identities = 52/72 (72%), Positives = 64/72 (88%)
Frame = +3
Query: 408 AKVAEYFDKAVKLALKVKSEAQGTKLKDFVSAMESSSGIQSEIAKLRHDVEEFAKQFPTI 587
AKVAEYFD AVK+ALK+K+E+QGTKLKDFV+ M+S+ +QSE++KLR VEE+AKQFPTI
Sbjct: 463 AKVAEYFDLAVKIALKIKAESQGTKLKDFVATMQSNEKLQSEMSKLREMVEEYAKQFPTI 522
Query: 588 GFEKETMKYKN* 623
GFEKETM+YK *
Sbjct: 523 GFEKETMRYKE* 534
>TAIR9_protein||AT5G26780.2 | Symbols: SHM2 | SHM2 (SERINE
HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr5:9418299-9421725 FORWARD
Length = 534
Score = 189 bits (478), Expect = 2e-048
Identities = 97/126 (76%), Positives = 109/126 (86%), Gaps = 2/126 (1%)
Frame = +2
Query: 41 MAMALRRLSSSVDKPIRPLIRS--SSCYMSSLPSEAVDDKERSRVTWPKQLNASLEEVDP 214
MA+ALRRLSSSV KPI L + S +MSSL + A+ + E+SR +W KQLNASL+E+DP
Sbjct: 1 MALALRRLSSSVKKPISLLSSNGGSLRFMSSLSTAAMAESEKSRSSWIKQLNASLDEIDP 60
Query: 215 EIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 394
E+ADIIE EKARQWKG ELIPSENFTS+SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM
Sbjct: 61 EVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 120
Query: 395 AETLCQ 412
AETLCQ
Sbjct: 121 AETLCQ 126
Score = 110 bits (273), Expect = 1e-024
Identities = 52/72 (72%), Positives = 64/72 (88%)
Frame = +3
Query: 408 AKVAEYFDKAVKLALKVKSEAQGTKLKDFVSAMESSSGIQSEIAKLRHDVEEFAKQFPTI 587
AKVAEYFD AVK+ALK+K+E+QGTKLKDFV+ M+S+ +QSE++KLR VEE+AKQFPTI
Sbjct: 463 AKVAEYFDLAVKIALKIKAESQGTKLKDFVATMQSNEKLQSEMSKLREMVEEYAKQFPTI 522
Query: 588 GFEKETMKYKN* 623
GFEKETM+YK *
Sbjct: 523 GFEKETMRYKE* 534
>TAIR9_protein||AT4G32520.1 | Symbols: SHM3 | SHM3 (SERINE
HYDROXYMETHYLTRANSFERASE 3); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr4:15689642-15692334 REVERSE
Length = 530
Score = 110 bits (274), Expect = 1e-024
Identities = 62/126 (49%), Positives = 77/126 (61%), Gaps = 12/126 (9%)
Frame = +2
Query: 56 RRLSSSVDKPIRP------LIRSSSCYMSSLPSEAVDDKERSRVTWPKQLNASLEEVDPE 217
++L ++ KP R L+ SLP+ + KE + L EVDPE
Sbjct: 36 QQLKFNISKPFRSSFLKRNLVSEMRASSVSLPNVEISSKEIPFEDY------GLGEVDPE 89
Query: 218 IADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 397
+ II EK RQ++ LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGGNEYID
Sbjct: 90 VRTIITKEKDRQFRSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDQL 149
Query: 398 ETLCQS 415
ETLCQ+
Sbjct: 150 ETLCQN 155
>TAIR9_protein||AT4G32520.2 | Symbols: SHM3 | SHM3 (SERINE
HYDROXYMETHYLTRANSFERASE 3); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr4:15689642-15692334 REVERSE
Length = 530
Score = 110 bits (274), Expect = 1e-024
Identities = 62/126 (49%), Positives = 77/126 (61%), Gaps = 12/126 (9%)
Frame = +2
Query: 56 RRLSSSVDKPIRP------LIRSSSCYMSSLPSEAVDDKERSRVTWPKQLNASLEEVDPE 217
++L ++ KP R L+ SLP+ + KE + L EVDPE
Sbjct: 36 QQLKFNISKPFRSSFLKRNLVSEMRASSVSLPNVEISSKEIPFEDY------GLGEVDPE 89
Query: 218 IADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 397
+ II EK RQ++ LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGGNEYID
Sbjct: 90 VRTIITKEKDRQFRSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDQL 149
Query: 398 ETLCQS 415
ETLCQ+
Sbjct: 150 ETLCQN 155
>TAIR9_protein||AT4G13930.1 | Symbols: SHM4 | SHM4 (serine
hydroxymethyltransferase 4); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr4:8048013-8050021 REVERSE
Length = 472
Score = 108 bits (268), Expect = 5e-024
Identities = 51/76 (67%), Positives = 61/76 (80%)
Frame = +2
Query: 188 NASLEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 367
N SL VDPEI D+IE EK RQ +G+ELI SENFTS +V++A+GS +TNKYSEG PG RY
Sbjct: 9 NTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGIPGNRY 68
Query: 368 YGGNEYIDMAETLCQS 415
YGGNE+ID E LC+S
Sbjct: 69 YGGNEFIDEIENLCRS 84
>TAIR9_protein||AT4G13890.1 | Symbols: SHM5, EDA36, EDA37 | EDA36 (EMBRYO SAC
DEVELOPMENT ARREST 37); catalytic/ glycine hydroxymethyltransferase/
pyridoxal phosphate binding | chr4:8032146-8033718 REVERSE
Length = 471
Score = 106 bits (263), Expect = 2e-023
Identities = 50/76 (65%), Positives = 62/76 (81%)
Frame = +2
Query: 188 NASLEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 367
N L+ VDPEI D+IE EK RQ +G+ELI +ENFTSV+VM+A+GS +TNKYSEG PG RY
Sbjct: 9 NTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRY 68
Query: 368 YGGNEYIDMAETLCQS 415
YGG E+ID E+LC+S
Sbjct: 69 YGGTEFIDEIESLCRS 84
>TAIR9_protein||AT1G22020.1 | Symbols: SHM6 | SHM6 (serine
hydroxymethyltransferase 6); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr1:7754599-7757087 FORWARD
Length = 600
Score = 103 bits (256), Expect = 1e-022
Identities = 48/75 (64%), Positives = 59/75 (78%)
Frame = +2
Query: 188 NASLEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 367
N S+EE DPEI + +E EK RQ++G+ELI SENF +VM+A+GS +TNKYSEG PGARY
Sbjct: 139 NQSIEEADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARY 198
Query: 368 YGGNEYIDMAETLCQ 412
Y GN+YID E LCQ
Sbjct: 199 YTGNQYIDQIEILCQ 213
>TAIR9_protein||AT1G36370.1 | Symbols: SHM7 | SHM7 (serine
hydroxymethyltransferase 7); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr1:13696240-13698576 REVERSE
Length = 599
Score = 93 bits (229), Expect = 2e-019
Identities = 48/105 (45%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Frame = +2
Query: 95 LIRSSSCYMSSLPSEAVDDKERSRVTWPKQLNASLEEVDPEIADIIEHEKARQWKGLELI 274
L +S SS+ ++ + + W Q + DP+I +++E EK RQ +G+ELI
Sbjct: 107 LTQSKHPKRSSIGDSDLESRRAAVRAWGDQ---PIHLADPDIHELMEKEKQRQVRGIELI 163
Query: 275 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLC 409
SENF +VM+A+GS +TNKYSEG PGARYY GN+YID E LC
Sbjct: 164 ASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIENLC 208
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,351,794,319
Number of Sequences: 33410
Number of Extensions: 22351794319
Number of Successful Extensions: 702452299
Number of sequences better than 0.0: 0
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