BLASTX 7.6.2
Query= UN46792 /QuerySize=986
(985 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G15760.1 | Symbols: | FUNCTIONS IN: molecular... 313 2e-085
TAIR9_protein||AT1G80520.1 | Symbols: | FUNCTIONS IN: molecular... 177 1e-044
TAIR9_protein||AT2G12462.1 | Symbols: | unknown protein | chr2:... 97 2e-020
>TAIR9_protein||AT1G15760.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sterile alpha
motif homology (InterPro:IPR010993); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G80520.1); Has 30 Blast hits to 30
proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:5425714-5426322 FORWARD
Length = 203
Score = 313 bits (800), Expect = 2e-085
Identities = 164/211 (77%), Positives = 181/211 (85%), Gaps = 13/211 (6%)
Frame = +1
Query: 43 WFSWLSRTNLEPCLIHEYSLSFSKNELEHEDIAYFNHEFLQSIGVSIAKHRLEILKLARR 222
WFSWLSRTNLEP LIHEY LSFS+NELEHEDI+YF+HEFLQS+G+SIAKHRLEILKLARR
Sbjct: 5 WFSWLSRTNLEPSLIHEYGLSFSQNELEHEDISYFDHEFLQSMGISIAKHRLEILKLARR 64
Query: 223 ERKRSSSLLTSRSISRVVVAIKKTSRCLSDHVRAWIRCEEEE-SSRALVLVPKRSSCGSS 399
+RK S LTSRSISRVV AIKKT +CLSDHVRAWIR EEE SSRALVLVPK+ +
Sbjct: 65 DRKNSPP-LTSRSISRVVTAIKKTRKCLSDHVRAWIRREEESASSRALVLVPKK-----T 118
Query: 400 SGGVGKWRGGFLKSRNERSVTPSNANGGGVHKQQEMLLLTNGTPCRIDSFSSPMVFDYSF 579
S G+GKWRGGFLK RN+RSV PSN NGG ++QE LLLTNGTPCRIDSFSSPMVFDYSF
Sbjct: 119 SNGIGKWRGGFLK-RNKRSVMPSNGNGG--LEKQERLLLTNGTPCRIDSFSSPMVFDYSF 175
Query: 580 KEEMVYKENSQDTYLEEIKWDSMFQNLKPT* 672
K+E +Y +QDTY E+IKWDSMFQNLKPT*
Sbjct: 176 KDEKLY---AQDTYFEDIKWDSMFQNLKPT* 203
>TAIR9_protein||AT1G80520.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 16 plant structures;
EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence
stage, petal differentiation and expansion stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Sterile alpha motif homology
(InterPro:IPR010993); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G15760.1); Has 30 Blast hits to 30 proteins in
7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:30276481-30277059 FORWARD
Length = 193
Score = 177 bits (447), Expect = 1e-044
Identities = 93/129 (72%), Positives = 107/129 (82%), Gaps = 8/129 (6%)
Frame = +1
Query: 37 MDWFSWLSRTNLEPCLIHEYSLSFSKNELEHEDIAYFNHEFLQSIGVSIAKHRLEILKLA 216
MDWFSWLSRTNLE LI+EY LSFS NELE+EDIAYFNHEFLQS+G+SIAKHRLEILKLA
Sbjct: 1 MDWFSWLSRTNLEASLIYEYGLSFSNNELEYEDIAYFNHEFLQSMGISIAKHRLEILKLA 60
Query: 217 RRERKRSSSLLTSRSISRVVVAIKKTSRCLSDHVRAWIRCEEEESSRALVLVPKRSSCGS 396
RR+RK S LT+RSI RV++AIKKT +C S+HVRAWIR EESSRALV+V S +
Sbjct: 61 RRDRKPSP--LTARSIFRVLIAIKKTGKCFSEHVRAWIR--REESSRALVVV----SRST 112
Query: 397 SSGGVGKWR 423
SS G G+W+
Sbjct: 113 SSSGNGRWK 121
Score = 68 bits (164), Expect = 9e-012
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 7/80 (8%)
Frame = +1
Query: 424 GGFLKSRNERSVTPSNANGGGVHKQQEMLLLTNGTPCRIDSFSSPMVFDYSFKEEMVYKE 603
G + +R +R V PSN NG ++E LLLTNGTPCR+DSFS+P V ++++ +
Sbjct: 118 GRWKSARKKRLVMPSNGNG----VKEERLLLTNGTPCRLDSFSNPKV-SSGYEDDDNHWG 172
Query: 604 NSQDTYLEEIKWDSMFQNLK 663
N E+IKWDSMFQNLK
Sbjct: 173 NKD--VEEKIKWDSMFQNLK 190
>TAIR9_protein||AT2G12462.1 | Symbols: | unknown protein | chr2:5050583-5051585
REVERSE
Length = 250
Score = 97 bits (239), Expect = 2e-020
Identities = 42/98 (42%), Positives = 69/98 (70%)
Frame = +1
Query: 37 MDWFSWLSRTNLEPCLIHEYSLSFSKNELEHEDIAYFNHEFLQSIGVSIAKHRLEILKLA 216
MDWFSWLS+T+L+P L +EY L F++ +L+ EDIA FNH FL+ +GV++ KHR+EILKL+
Sbjct: 1 MDWFSWLSKTDLDPTLSYEYGLIFAQKKLQGEDIALFNHNFLRRLGVTVTKHRVEILKLS 60
Query: 217 RRERKRSSSLLTSRSISRVVVAIKKTSRCLSDHVRAWI 330
+RE + SS ++++ + K ++ + + + W+
Sbjct: 61 KRETQALSSYNHRPVSAKLISVVIKATKSVGNRLNKWL 98
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,395,272,246
Number of Sequences: 33410
Number of Extensions: 22395272246
Number of Successful Extensions: 702467102
Number of sequences better than 0.0: 0
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