BLASTX 7.6.2
Query= UN46915 /QuerySize=313
(312 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G48760.1 | Symbols: | 60S ribosomal protein L... 102 5e-023
TAIR9_protein||AT5G48760.2 | Symbols: | 60S ribosomal protein L... 102 5e-023
TAIR9_protein||AT4G13170.1 | Symbols: | 60S ribosomal protein L... 101 8e-023
TAIR9_protein||AT3G07110.1 | Symbols: | 60S ribosomal protein L... 99 5e-022
TAIR9_protein||AT3G24830.1 | Symbols: | 60S ribosomal protein L... 95 8e-021
TAIR9_protein||AT3G07110.2 | Symbols: | 60S ribosomal protein L... 92 7e-020
>TAIR9_protein||AT5G48760.1 | Symbols: | 60S ribosomal protein L13A (RPL13aD) |
chr5:19771315-19772686 REVERSE
Length = 207
Score = 102 bits (253), Expect = 5e-023
Identities = 50/55 (90%), Positives = 52/55 (94%)
Frame = +3
Query: 3 NHYDTIKELETKRKERSQVVYERKKQLNKLRAKAEKVAEEKLGAQLEILAPVKY* 167
NHYDTIKELETKRKER+ VVYERKKQLNKLR KAEKVAEEKLGAQL+ILAPVKY*
Sbjct: 153 NHYDTIKELETKRKERAHVVYERKKQLNKLRVKAEKVAEEKLGAQLDILAPVKY* 207
>TAIR9_protein||AT5G48760.2 | Symbols: | 60S ribosomal protein L13A (RPL13aD) |
chr5:19771315-19772686 REVERSE
Length = 207
Score = 102 bits (253), Expect = 5e-023
Identities = 50/55 (90%), Positives = 52/55 (94%)
Frame = +3
Query: 3 NHYDTIKELETKRKERSQVVYERKKQLNKLRAKAEKVAEEKLGAQLEILAPVKY* 167
NHYDTIKELETKRKER+ VVYERKKQLNKLR KAEKVAEEKLGAQL+ILAPVKY*
Sbjct: 153 NHYDTIKELETKRKERAHVVYERKKQLNKLRVKAEKVAEEKLGAQLDILAPVKY* 207
>TAIR9_protein||AT4G13170.1 | Symbols: | 60S ribosomal protein L13A (RPL13aC) |
chr4:7655133-7656542 REVERSE
Length = 207
Score = 101 bits (251), Expect = 8e-023
Identities = 48/55 (87%), Positives = 53/55 (96%)
Frame = +3
Query: 3 NHYDTIKELETKRKERSQVVYERKKQLNKLRAKAEKVAEEKLGAQLEILAPVKY* 167
NHYDTIKELETKRKERSQV+YERKKQLNKLR KAEKVAEE+LG+QL++LAPVKY*
Sbjct: 153 NHYDTIKELETKRKERSQVMYERKKQLNKLRTKAEKVAEERLGSQLDVLAPVKY* 207
>TAIR9_protein||AT3G07110.1 | Symbols: | 60S ribosomal protein L13A (RPL13aA) |
chr3:2252092-2253332 FORWARD
Length = 207
Score = 99 bits (244), Expect = 5e-022
Identities = 47/55 (85%), Positives = 52/55 (94%)
Frame = +3
Query: 3 NHYDTIKELETKRKERSQVVYERKKQLNKLRAKAEKVAEEKLGAQLEILAPVKY* 167
NHYDTIKELE KRKER+Q VYERKKQL+KLRAKAEKVAEEKLG+QL++LAPVKY*
Sbjct: 153 NHYDTIKELENKRKERAQAVYERKKQLSKLRAKAEKVAEEKLGSQLDVLAPVKY* 207
>TAIR9_protein||AT3G24830.1 | Symbols: | 60S ribosomal protein L13A (RPL13aB) |
chr3:9064613-9065871 FORWARD
Length = 207
Score = 95 bits (234), Expect = 8e-021
Identities = 45/55 (81%), Positives = 50/55 (90%)
Frame = +3
Query: 3 NHYDTIKELETKRKERSQVVYERKKQLNKLRAKAEKVAEEKLGAQLEILAPVKY* 167
NHYDTIKELE KRKERSQ +YERKKQL KLRAKAEKVAEEKLG+QL++LA +KY*
Sbjct: 153 NHYDTIKELEVKRKERSQALYERKKQLTKLRAKAEKVAEEKLGSQLDVLASIKY* 207
>TAIR9_protein||AT3G07110.2 | Symbols: | 60S ribosomal protein L13A (RPL13aA) |
chr3:2252092-2253332 FORWARD
Length = 208
Score = 92 bits (226), Expect = 7e-020
Identities = 46/55 (83%), Positives = 51/55 (92%), Gaps = 1/55 (1%)
Frame = +3
Query: 6 HYDTIK-ELETKRKERSQVVYERKKQLNKLRAKAEKVAEEKLGAQLEILAPVKY* 167
HYDTIK ELE KRKER+Q VYERKKQL+KLRAKAEKVAEEKLG+QL++LAPVKY*
Sbjct: 154 HYDTIKQELENKRKERAQAVYERKKQLSKLRAKAEKVAEEKLGSQLDVLAPVKY* 208
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,439,765,197
Number of Sequences: 33410
Number of Extensions: 22439765197
Number of Successful Extensions: 702479089
Number of sequences better than 0.0: 0
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