BLASTX 7.6.2
Query= UN47115 /QuerySize=696
(695 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G23430.1 | Symbols: | transducin family prote... 154 4e-038
TAIR9_protein||AT5G23430.2 | Symbols: | transducin family prote... 148 4e-036
TAIR9_protein||AT5G08390.1 | Symbols: | FUNCTIONS IN: molecular... 135 3e-032
TAIR9_protein||AT1G61210.1 | Symbols: | WD-40 repeat family pro... 78 5e-015
TAIR9_protein||AT1G11160.1 | Symbols: | nucleotide binding | ch... 77 7e-015
>TAIR9_protein||AT5G23430.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr5:7894073-7899862 REVERSE
Length = 838
Score = 154 bits (389), Expect = 4e-038
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = +3
Query: 3 HLSVSLDMLLKLVRMYGSPIYSSLSAPASVGVDIEAEQRIERYSRCFVELEKAKACLPSL 182
HLSVSLD+LLKLVR+YGSPIYSSLSAPASVGVDIEAEQRIERYSRCFVELEK KACLPSL
Sbjct: 755 HLSVSLDLLLKLVRLYGSPIYSSLSAPASVGVDIEAEQRIERYSRCFVELEKVKACLPSL 814
Query: 183 SRRGGLVAKSVIELNLAFQEVSS* 254
+RRGGLVAKSV+ELNLAFQEVSS*
Sbjct: 815 ARRGGLVAKSVLELNLAFQEVSS* 838
>TAIR9_protein||AT5G23430.2 | Symbols: | transducin family protein / WD-40
repeat family protein | chr5:7894073-7899862 REVERSE
Length = 837
Score = 148 bits (372), Expect = 4e-036
Identities = 77/84 (91%), Positives = 81/84 (96%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 HLSVSLDMLLKLVRMYGSPIYSSLSAPASVGVDIEAEQRIERYSRCFVELEKAKACLPSL 182
HLSVSLD+LLKLVR+YGSPIYSSLSAPASVGVDIEAEQRIERYSRCFVELEK KACLPSL
Sbjct: 755 HLSVSLDLLLKLVRLYGSPIYSSLSAPASVGVDIEAEQRIERYSRCFVELEKVKACLPSL 814
Query: 183 SRRGGLVAKSVIELNLAFQEVSS* 254
+ RGGLVAKSV+ELNLAFQEVSS*
Sbjct: 815 A-RGGLVAKSVLELNLAFQEVSS* 837
>TAIR9_protein||AT5G08390.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING
ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986),
WD40/YVTN repeat-like (InterPro:IPR015943), WD40 repeat
(InterPro:IPR001680); BEST Arabidopsis thaliana protein match is:
transducin family protein / WD-40 repeat family protein
(TAIR:AT5G23430.1); Has 84267 Blast hits to 30722 proteins in 748
species: Archae - 68; Bacteria - 7813; Metazoa - 39755; Fungi - 16342;
Plants - 8110; Viruses - 6; Other Eukaryotes - 12173 (source: NCBI
BLink). | chr5:2701448-2706910 FORWARD
Length = 840
Score = 135 bits (339), Expect = 3e-032
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = +3
Query: 3 HLSVSLDMLLKLVRMYGSPIYSSLSAPASVGVDIEAEQRIERYSRCFVELEKAKACLPSL 182
HLSV LD+LLKLVRMYGS IYSSLSAP+SVGVDIEAEQR+ERYS CFVE EK KACLPSL
Sbjct: 757 HLSVCLDLLLKLVRMYGSQIYSSLSAPSSVGVDIEAEQRMERYSCCFVEFEKIKACLPSL 816
Query: 183 SRRGGLVAKSVIELNLAFQEVSS* 254
+RRG LVAK++ ELNL FQEVSS*
Sbjct: 817 ARRGNLVAKTLHELNLTFQEVSS* 840
>TAIR9_protein||AT1G61210.1 | Symbols: | WD-40 repeat family protein / katanin
p80 subunit, putative | chr1:22564785-22571555 FORWARD
Length = 1181
Score = 78 bits (190), Expect = 5e-015
Identities = 39/78 (50%), Positives = 56/78 (71%)
Frame = +3
Query: 6 LSVSLDMLLKLVRMYGSPIYSSLSAPASVGVDIEAEQRIERYSRCFVELEKAKACLPSLS 185
++VSL+MLLKLV ++G+ I S++SA VGVD+ AE+R++ C EL+K + LP L+
Sbjct: 1101 VNVSLEMLLKLVAVFGTVIQSTVSARRVVGVDLHAEERLQICQSCSAELQKVQKILPLLT 1160
Query: 186 RRGGLVAKSVIELNLAFQ 239
RRGGL+A+ ELNL Q
Sbjct: 1161 RRGGLIARKAQELNLVLQ 1178
>TAIR9_protein||AT1G11160.1 | Symbols: | nucleotide binding |
chr1:3733406-3739363 FORWARD
Length = 1022
Score = 77 bits (189), Expect = 7e-015
Identities = 40/79 (50%), Positives = 54/79 (68%)
Frame = +3
Query: 6 LSVSLDMLLKLVRMYGSPIYSSLSAPASVGVDIEAEQRIERYSRCFVELEKAKACLPSLS 185
++VSLDMLLKLV ++G+ I S++SAP VGVD+ A +R+E C L K + LP L+
Sbjct: 942 VNVSLDMLLKLVAVFGTVIRSTVSAPRIVGVDLHANERLEICQICSAGLHKIQRILPVLA 1001
Query: 186 RRGGLVAKSVIELNLAFQE 242
RRGGL+ + ELNL QE
Sbjct: 1002 RRGGLITRKAQELNLVLQE 1020
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,534,244,245
Number of Sequences: 33410
Number of Extensions: 22534244245
Number of Successful Extensions: 707664446
Number of sequences better than 0.0: 0
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