BLASTX 7.6.2
Query= UN47259 /QuerySize=641
(640 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabido... 135 3e-031
sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabido... 110 9e-024
sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabido... 97 8e-020
sp|Q5KBW2|PABP_CRYNE Polyadenylate-binding protein, cytoplasmic ... 91 4e-018
sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic ... 82 3e-015
sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic ... 81 6e-015
sp|Q6DEY7|EPAB_XENTR Embryonic polyadenylate-binding protein OS=... 80 7e-015
sp|P21187|PABP_DROME Polyadenylate-binding protein OS=Drosophila... 79 2e-014
sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic ... 79 3e-014
sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic ... 78 5e-014
sp|Q98SP8|EPABA_XENLA Embryonic polyadenylate-binding protein A ... 77 6e-014
sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic ... 77 1e-013
sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus mus... 76 2e-013
sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus no... 76 2e-013
sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sa... 76 2e-013
sp|Q6GR16|EPABB_XENLA Embryonic polyadenylate-binding protein B ... 75 2e-013
sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos tau... 75 2e-013
sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sa... 75 2e-013
sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo a... 75 2e-013
sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenop... 75 3e-013
>sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabidopsis thaliana
GN=PAB2 PE=1 SV=1
Length = 629
Score = 135 bits (338), Expect = 3e-031
Identities = 75/124 (60%), Positives = 89/124 (71%), Gaps = 7/124 (5%)
Frame = -3
Query: 635 QQPMPYMHPQMMAGGRGHRYPRGRNMPDGPMPGGRVPFPYDINGVPIMPAGALASSLAQA 456
QQ P M QM GR RYP+GR G VP PYD+ + GALAS+L+ A
Sbjct: 498 QQQNPMMQQQMHPRGRMFRYPQGRG------GSGDVP-PYDMGNNMPLTIGALASNLSNA 550
Query: 455 SPAHQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDV 276
+P QRT+LGE LYPLV ++E E+AAKVTGMLLEMDQTEVLHL+ESPEAL AKV+EA+DV
Sbjct: 551 TPEQQRTMLGEVLYPLVEQVEAESAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMDV 610
Query: 275 LRNV 264
LR+V
Sbjct: 611 LRSV 614
>sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabidopsis thaliana
GN=PAB3 PE=2 SV=1
Length = 660
Score = 110 bits (274), Expect = 9e-024
Identities = 66/136 (48%), Positives = 84/136 (61%), Gaps = 8/136 (5%)
Frame = -3
Query: 629 PMPYMHPQMMAGGRGHRYPRGRNMPDGPMPGGRVPFPYDINGV-----PIMPAGALASSL 465
P P M + M G R ++P G +P +P P D + + P++P L SSL
Sbjct: 523 PSPGM--RYMNGASNGRNGMDSSVPQGILP-PIIPLPIDASSISHQKAPLLPISKLTSSL 579
Query: 464 AQASPAHQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEA 285
A ASPA + +LGE LYPLV + E + AKVTGMLLEMDQ E+LHL+ESPEAL +KVSEA
Sbjct: 580 ASASPADRTRMLGEQLYPLVERHEPLHVAKVTGMLLEMDQAEILHLMESPEALKSKVSEA 639
Query: 284 LDVLRNVNQPSEGKSG 237
LDVLR P++ G
Sbjct: 640 LDVLRLSVDPTDHDLG 655
>sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabidopsis thaliana
GN=PAB5 PE=1 SV=2
Length = 668
Score = 97 bits (240), Expect = 8e-020
Identities = 52/76 (68%), Positives = 58/76 (76%)
Frame = -3
Query: 479 LASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNA 300
LAS LA ASP +LG+ LYPLV + E NAAKVTGMLLEMDQ E+LHL+ESPEAL A
Sbjct: 578 LASDLALASPDKHPRMLGDHLYPLVEQQEPANAAKVTGMLLEMDQAEILHLLESPEALKA 637
Query: 299 KVSEALDVLRNVNQPS 252
KVSEALDVLR P+
Sbjct: 638 KVSEALDVLRRSADPA 653
>sp|Q5KBW2|PABP_CRYNE Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Cryptococcus neoformans GN=PAB1 PE=3 SV=1
Length = 673
Score = 91 bits (225), Expect = 4e-018
Identities = 51/100 (51%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Frame = -3
Query: 566 RNMPDGPMP-GGRVPFPYDINGVPIMPAGAL-ASSLAQASPAHQRTILGETLYPLVNKIE 393
+ +P G +P GG++P P AG L A SLA+A+PA Q+ +LGE LYPL+++ +
Sbjct: 542 QGLPAGSIPRGGQMPARPHEQAAPAPQAGRLDAQSLARAAPAEQKQMLGEALYPLIHETQ 601
Query: 392 HENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVL 273
E A K+TGMLLEMD E+LHL+ES AL KV EAL VL
Sbjct: 602 PELAGKITGMLLEMDNAELLHLVESQPALQEKVDEALRVL 641
>sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Phaeosphaeria nodorum GN=PAB1 PE=3 SV=3
Length = 744
Score = 82 bits (200), Expect = 3e-015
Identities = 58/146 (39%), Positives = 81/146 (55%), Gaps = 19/146 (13%)
Frame = -3
Query: 626 MPYMHPQMMAGGRGHR-----YPR-GRNMPDG----PMPGGRVPFPYDINGVPIMPAGAL 477
MP M +AGG G R +P+ GR P G PMPG FP G P P G
Sbjct: 599 MPGMPQAQIAGGPGIRGGQGGFPQGGRGAPGGRGQPPMPG----FPQ--GGRPGGP-GVD 651
Query: 476 ASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAK 297
S L+ A+P Q+ +LGE LYP +++++ E A K+TGMLLEMD +E+++L AL AK
Sbjct: 652 MSVLSAAAPGQQKQMLGEALYPKIHEMQPELAGKITGMLLEMDNSELINLTADESALRAK 711
Query: 296 VSEALDVLRNV--NQPSEGKSGSPSD 225
V EA+ V N+ +G+ +P +
Sbjct: 712 VDEAMSVYDEYVKNKEGDGEKEAPKE 737
>sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus clavatus GN=pab1 PE=3 SV=1
Length = 754
Score = 81 bits (198), Expect = 6e-015
Identities = 59/133 (44%), Positives = 77/133 (57%), Gaps = 8/133 (6%)
Frame = -3
Query: 602 MAGGRGHRYP--RGRNMPD-GPMP-GGR--VPFPYDINGVPIMPAGAL-ASSLAQASPAH 444
M G+G R P +GR P GP P GGR G PAGAL A +L A+P
Sbjct: 605 MPMGQGMRGPGYQGRGGPQGGPRPQGGRGQNAAAQPAAGREEAPAGALTAQALNAAAPPQ 664
Query: 443 QRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNV 264
Q+ +LGE LYP + + E A K+TGMLLEMD TE+L L+E +AL AKV EAL V +
Sbjct: 665 QKQMLGEALYPKIQAQQPELAGKITGMLLEMDNTELLGLLEDDDALRAKVDEALSVY-DE 723
Query: 263 NQPSEGKSGSPSD 225
++G+ +P+D
Sbjct: 724 YMKNKGEGEAPAD 736
>sp|Q6DEY7|EPAB_XENTR Embryonic polyadenylate-binding protein OS=Xenopus
tropicalis GN=epabp PE=2 SV=1
Length = 629
Score = 80 bits (197), Expect = 7e-015
Identities = 38/69 (55%), Positives = 55/69 (79%)
Frame = -3
Query: 476 ASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAK 297
ASSLA A P Q+ +LGE LYPL++++ A K+TGMLLE+D +E+LH++ESPE+L++K
Sbjct: 544 ASSLASAPPQEQKQMLGERLYPLIHEMHPTLAGKITGMLLEIDNSELLHMLESPESLHSK 603
Query: 296 VSEALDVLR 270
V EA+ VL+
Sbjct: 604 VEEAVAVLQ 612
>sp|P21187|PABP_DROME Polyadenylate-binding protein OS=Drosophila melanogaster
GN=pAbp PE=1 SV=3
Length = 634
Score = 79 bits (193), Expect = 2e-014
Identities = 51/124 (41%), Positives = 70/124 (56%), Gaps = 9/124 (7%)
Frame = -3
Query: 602 MAGG---RGHRYPRGRNMPDGPMP--GGRVPFPYDINGVPIMPAGALASSLAQASPAHQR 438
+AGG R Y NM + P+P P P + G +AS LA A P Q+
Sbjct: 512 IAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK--NSEKLIASLLANAKPQEQK 569
Query: 437 TILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLR--NV 264
ILGE LYP++ + A K+TGMLLE++ +E+LH+IE EAL AKV EA+ VL+ V
Sbjct: 570 QILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQVHRV 629
Query: 263 NQPS 252
+P+
Sbjct: 630 TEPA 633
>sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 PE=3
SV=1
Length = 753
Score = 79 bits (192), Expect = 3e-014
Identities = 55/131 (41%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Frame = -3
Query: 605 MMAGGRGHRYPRGR-------NMPDGPMPGGRVPFPYDINGVPIMPAGALASSLAQASPA 447
M G RG Y +GR M G G+ P G AG A SLA A
Sbjct: 602 MGQGMRGPGYGQGRGGVPVQGQMRPGQGGRGQNAQPAAGRGEEAPAAGLTAQSLAAAPAP 661
Query: 446 HQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRN 267
Q+ +LGE LYP + + E A K+TGMLLEMD TE+L L+E EAL AKV EAL V
Sbjct: 662 QQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNTELLSLLEDDEALRAKVDEALSVYDE 721
Query: 266 V--NQPSEGKS 240
N+ +EG++
Sbjct: 722 YMKNKGTEGEA 732
>sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus oryzae GN=pab1 PE=3 SV=1
Length = 765
Score = 78 bits (190), Expect = 5e-014
Identities = 55/154 (35%), Positives = 78/154 (50%), Gaps = 15/154 (9%)
Frame = -3
Query: 611 PQMMAGGRGHRYPRGRN---MPDGPMPGGRVPFPYDINGVP------IMPAGALASSLAQ 459
P M G RG Y +GR + G M G+ + P + G A +L+
Sbjct: 610 PNMGQGMRGPGYGQGRGGVPVQQGQMRPGQGGRGQNAAQAPAGRPEEAVAGGLTAQALSA 669
Query: 458 ASPAHQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALD 279
A P Q+ +LGE LYP + + E A K+TGMLLEM+ TE+L L+E EAL AKV EAL+
Sbjct: 670 APPPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMENTELLSLLEDEEALRAKVDEALN 729
Query: 278 V----LRNVNQPSE--GKSGSPSDMMASLSINDH 195
V ++N SE G++ P + S ++
Sbjct: 730 VYDEYMKNKGGESEATGEAAKPKEAAKETSTEEN 763
>sp|Q98SP8|EPABA_XENLA Embryonic polyadenylate-binding protein A OS=Xenopus
laevis GN=epabp-a PE=1 SV=2
Length = 629
Score = 77 bits (189), Expect = 6e-014
Identities = 41/85 (48%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Frame = -3
Query: 476 ASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAK 297
AS LA A P Q+ +LGE +YP+++++ A K+TGMLLE+D +E+LH++ESPE+L++K
Sbjct: 544 ASLLAGAPPQEQKQMLGERIYPVIHEMHPTLAGKITGMLLEIDNSELLHMLESPESLHSK 603
Query: 296 VSEALDVLRNVNQPSEG--KSGSPS 228
V EA+ VL+ +Q E KS PS
Sbjct: 604 VEEAVAVLQ-AHQAKENAQKSAQPS 627
>sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Emericella nidulans GN=pab1 PE=2 SV=2
Length = 732
Score = 77 bits (187), Expect = 1e-013
Identities = 53/124 (42%), Positives = 67/124 (54%), Gaps = 9/124 (7%)
Frame = -3
Query: 596 GGRGHRYPRGRNMPDGPMPGGRVPFPYDINGVPIMPAGAL-ASSLAQASPAHQRTILGET 420
GGRG G+ P G V P P P G L A +L+ A P Q+ +LGE
Sbjct: 599 GGRGGVPLGGQMRPGQGGRGQAVGQP-----GPETPVGVLTAQALSAAPPQQQKQMLGEA 653
Query: 419 LYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPSEGKS 240
LYP + + E A K+TGMLLEMD TE+L L+E EAL AKV EAL V ++ + KS
Sbjct: 654 LYPKIQATQPELAGKITGMLLEMDNTELLGLLEDDEALRAKVDEALSV---YDEYMKNKS 710
Query: 239 GSPS 228
P+
Sbjct: 711 DEPA 714
>sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1
PE=1 SV=1
Length = 636
Score = 76 bits (185), Expect = 2e-013
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = -3
Query: 476 ASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAK 297
AS LA A P Q+ +LGE L+PL+ + A K+TGMLLE+D +E+LH++ESPE+L +K
Sbjct: 547 ASMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSK 606
Query: 296 VSEALDVLR 270
V EA+ VL+
Sbjct: 607 VDEAVAVLQ 615
>sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus norvegicus
GN=Pabpc1 PE=2 SV=1
Length = 636
Score = 76 bits (185), Expect = 2e-013
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = -3
Query: 476 ASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAK 297
AS LA A P Q+ +LGE L+PL+ + A K+TGMLLE+D +E+LH++ESPE+L +K
Sbjct: 547 ASMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSK 606
Query: 296 VSEALDVLR 270
V EA+ VL+
Sbjct: 607 VDEAVAVLQ 615
>sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4
PE=1 SV=1
Length = 644
Score = 76 bits (185), Expect = 2e-013
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = -3
Query: 476 ASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAK 297
AS LA A P Q+ +LGE L+PL+ + A K+TGMLLE+D +E+LH++ESPE+L +K
Sbjct: 556 ASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSK 615
Query: 296 VSEALDVLR 270
V EA+ VL+
Sbjct: 616 VDEAVAVLQ 624
>sp|Q6GR16|EPABB_XENLA Embryonic polyadenylate-binding protein B OS=Xenopus
laevis GN=epabp-b PE=2 SV=1
Length = 629
Score = 75 bits (184), Expect = 2e-013
Identities = 37/86 (43%), Positives = 57/86 (66%)
Frame = -3
Query: 476 ASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAK 297
AS LA A Q+ ILGE +YPL++++ A K+TGMLLE+D +E+LH++ESPE+L++K
Sbjct: 544 ASLLAAAPLQEQKQILGERIYPLIHEMHPTLAGKITGMLLEIDNSELLHMLESPESLHSK 603
Query: 296 VSEALDVLRNVNQPSEGKSGSPSDMM 219
V EA+ VL+ +P ++
Sbjct: 604 VEEAVAVLQAHQAKESAPKSAPQSLI 629
>sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1
PE=2 SV=1
Length = 636
Score = 75 bits (184), Expect = 2e-013
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = -3
Query: 476 ASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAK 297
AS LA A P Q+ +LGE L+PL+ + A K+TGMLLE+D +E+LH++ESPE+L +K
Sbjct: 547 ASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSK 606
Query: 296 VSEALDVLR 270
V EA+ VL+
Sbjct: 607 VDEAVAVLQ 615
>sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1
PE=1 SV=2
Length = 636
Score = 75 bits (184), Expect = 2e-013
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = -3
Query: 476 ASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAK 297
AS LA A P Q+ +LGE L+PL+ + A K+TGMLLE+D +E+LH++ESPE+L +K
Sbjct: 547 ASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSK 606
Query: 296 VSEALDVLR 270
V EA+ VL+
Sbjct: 607 VDEAVAVLQ 615
>sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1
PE=2 SV=1
Length = 636
Score = 75 bits (184), Expect = 2e-013
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = -3
Query: 476 ASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAK 297
AS LA A P Q+ +LGE L+PL+ + A K+TGMLLE+D +E+LH++ESPE+L +K
Sbjct: 547 ASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSK 606
Query: 296 VSEALDVLR 270
V EA+ VL+
Sbjct: 607 VDEAVAVLQ 615
>sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenopus laevis
GN=pabpc1-a PE=1 SV=3
Length = 633
Score = 75 bits (183), Expect = 3e-013
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = -3
Query: 476 ASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAK 297
AS LA A P Q+ +LGE L+PL+ + A K+TGMLLE+D +E+LH++ESPE+L +K
Sbjct: 545 ASMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSK 604
Query: 296 VSEALDVLR 270
V EA+ VL+
Sbjct: 605 VDEAVAVLQ 613
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 177,416,216,708
Number of Sequences: 518415
Number of Extensions: 177416216708
Number of Successful Extensions: 1076203161
Number of sequences better than 0.0: 0
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