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TAIR blast output of UN47278


BLASTX 7.6.2

Query= UN47278 /QuerySize=1013
        (1012 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G51120.1 | Symbols: PABN1, ATPABN1 | PABN1 (PO...    413   1e-115
TAIR9_protein||AT5G65260.1 | Symbols:  | polyadenylate-binding p...    278   6e-075
TAIR9_protein||AT5G10350.1 | Symbols:  | polyadenylate-binding p...    262   3e-070
TAIR9_protein||AT5G10350.2 | Symbols:  | polyadenylate-binding p...    236   2e-062
TAIR9_protein||AT2G16940.1 | Symbols:  | RNA recognition motif (...     55   5e-008
TAIR9_protein||AT2G35410.1 | Symbols:  | 33 kDa ribonucleoprotei...     54   1e-007
TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA b...     53   2e-007
TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine...     49   3e-006

>TAIR9_protein||AT5G51120.1 | Symbols: PABN1, ATPABN1 | PABN1
        (POLYADENYLATE-BINDING PROTEIN 1); RNA binding / poly(A) binding /
        protein binding | chr5:20779760-20781241 FORWARD

          Length = 228

 Score =  413 bits (1060), Expect = 1e-115
 Identities = 205/230 (89%), Positives = 215/230 (93%), Gaps = 4/230 (1%)
 Frame = +1

Query:  64 MTLNDEQEHEVYGGEIP-EEEGEMETDEYEEHVGEEEGAAAGGDEELEPGSSSKDLEDMK 240
           M ++DEQEHEVYGGEIP EEEGEM+T+EYEEH GEE   AA GDEELEPGSSS+DLEDMK
Sbjct:   1 MPVHDEQEHEVYGGEIPEEEEGEMDTEEYEEHGGEE--GAAAGDEELEPGSSSRDLEDMK 58

Query: 241 KRINEIEEEAGALREMQAKAEKEMGADQDPSGAISSAEKEEVDSRSIYVGNVDYACTPEE 420
           KRI EIEEEAGALREMQAKAEK+MGA QDPSG +S+AEKEEVDSRSIYVGNVDYACTPEE
Sbjct:  59 KRIKEIEEEAGALREMQAKAEKDMGASQDPSGGVSAAEKEEVDSRSIYVGNVDYACTPEE 118

Query: 421 VQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAKR 600
           VQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE +AVQNSLILNESELHGRQIKVSAKR
Sbjct: 119 VQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKR 178

Query: 601 TNVPGMRQFRGR-RPFRPMRGFMPGIPFYAPYGYGRVPRFRRPMRYRPY* 747
           TNVPGMRQFRGR RPFRPMRGFMPG+PFY PY YGRVPRFRRPMRYRPY*
Sbjct: 179 TNVPGMRQFRGRGRPFRPMRGFMPGVPFYPPYAYGRVPRFRRPMRYRPY* 228

>TAIR9_protein||AT5G65260.1 | Symbols:  | polyadenylate-binding protein family
        protein / PABP family protein | chr5:26080501-26082984 REVERSE

          Length = 221

 Score =  278 bits (709), Expect = 6e-075
 Identities = 146/224 (65%), Positives = 172/224 (76%), Gaps = 15/224 (6%)
 Frame = +1

Query:  88 HEVYGGEIPEEEGEMETDEYEEHVGEEEGAAAGGDEELEPGSSSKDLEDMKKRINEIEEE 267
           HEVYGGEIP + GEM+ D   E +  +   AA  D+ +      K+L++MKKR+ E+E+E
Sbjct:   6 HEVYGGEIP-DVGEMDGD--MEALNPDLDMAAADDDAV------KELDEMKKRLKEMEDE 56

Query: 268 AGALREMQAKAEKEMGADQDPSGAISSAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCG 447
           A ALREMQAK EKEMGA    S A + A KEEVD+RS++VGNVDYACTPEEVQQHFQ+CG
Sbjct:  57 AAALREMQAKVEKEMGAQDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCG 116

Query: 448 TVNRVTILTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAKRTNVPGMRQF 627
           TV+RVTILTDKFGQPKGFAYVEFVE +AVQ +L LNESELHGRQ+KV  KRTNVPG++QF
Sbjct: 117 TVHRVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQF 176

Query: 628 RGRRPFRPMRGFMPGIPF-----YAPYGYGRVPRFRRPMRYRPY 744
           RGRR F P  G+    PF     Y+PYGYG+ PRFRRPMRY PY
Sbjct: 177 RGRR-FNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRRPMRYMPY 219

>TAIR9_protein||AT5G10350.1 | Symbols:  | polyadenylate-binding protein family
        protein / PABP family protein | chr5:3255674-3257746 REVERSE

          Length = 218

 Score =  262 bits (668), Expect = 3e-070
 Identities = 138/217 (63%), Positives = 166/217 (76%), Gaps = 13/217 (5%)
 Frame = +1

Query: 130 METDEYEEHVGE--EEGAAAGGDEELEPGSSSKD----LEDMKKRINEIEEEAGALREMQ 291
           ME +E+E + GE  E G     D +++  ++ +D    L +MK+R+ E+EEEA ALREMQ
Sbjct:   1 MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60

Query: 292 AKAEKEMGADQDPSGAISSAE-KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 468
           AK EKEMGA QDP+   ++ E KEEVD+RS+YVGNVDYACTPEEVQ HFQ+CGTVNRVTI
Sbjct:  61 AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120

Query: 469 LTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRGRRPFR 648
           L DKFGQPKGFAYVEFVE +AVQ +L LNESELHGRQ+KVS KRTNVPGM+Q+   R F 
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGR-FN 179

Query: 649 PMRGF---MPGIP--FYAPYGYGRVPRFRRPMRYRPY 744
           P  G+    P +P  FY+PYGYG+ PRFRRPMRY PY
Sbjct: 180 PSMGYRFRRPFVPPYFYSPYGYGKAPRFRRPMRYMPY 216

>TAIR9_protein||AT5G10350.2 | Symbols:  | polyadenylate-binding protein family
        protein / PABP family protein | chr5:3255808-3257746 REVERSE

          Length = 203

 Score =  236 bits (601), Expect = 2e-062
 Identities = 127/203 (62%), Positives = 154/203 (75%), Gaps = 13/203 (6%)
 Frame = +1

Query: 130 METDEYEEHVGE--EEGAAAGGDEELEPGSSSKD----LEDMKKRINEIEEEAGALREMQ 291
           ME +E+E + GE  E G     D +++  ++ +D    L +MK+R+ E+EEEA ALREMQ
Sbjct:   1 MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60

Query: 292 AKAEKEMGADQDPSGAISSAE-KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 468
           AK EKEMGA QDP+   ++ E KEEVD+RS+YVGNVDYACTPEEVQ HFQ+CGTVNRVTI
Sbjct:  61 AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120

Query: 469 LTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRGRRPFR 648
           L DKFGQPKGFAYVEFVE +AVQ +L LNESELHGRQ+KVS KRTNVPGM+Q+   R F 
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGR-FN 179

Query: 649 PMRGF---MPGIP--FYAPYGYG 702
           P  G+    P +P  FY+PYGYG
Sbjct: 180 PSMGYRFRRPFVPPYFYSPYGYG 202

>TAIR9_protein||AT2G16940.1 | Symbols:  | RNA recognition motif (RRM)-containing
        protein | chr2:7342869-7347052 REVERSE

          Length = 562

 Score =  55 bits (132), Expect = 5e-008
 Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
 Frame = +1

Query: 370 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEEDAVQNSLI 549
           +R +YVGN+    + +++++ F+S G+V  V +  D+ G  KGF +V+F   +  +N+L 
Sbjct: 284 ARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALN 343

Query: 550 LN-ESELHGRQIKVSA--KRTNVP 612
           LN + E+ GR IKVSA   +T VP
Sbjct: 344 LNGQLEIAGRAIKVSAVTDQTEVP 367

>TAIR9_protein||AT2G35410.1 | Symbols:  | 33 kDa ribonucleoprotein, chloroplast,
        putative / RNA-binding protein cp33, putative | chr2:14898341-14899590
        FORWARD

          Length = 309

 Score =  54 bits (129), Expect = 1e-007
 Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
 Frame = +1

Query: 298 AEKEMGADQDPSGAISSAEKEEVD-SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILT 474
           AEKE  AD++ S    + E +  +  R ++V N+ ++ +  ++ + F  CGTVN V I+ 
Sbjct:  69 AEKETSADEETSQEEKTEETQNSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIR 128

Query: 475 DKFGQPKGFAYVEFVEEDAVQNSL-ILNESELHGRQIKVSAKR 600
            K G+ +GFA+V     +  Q ++   +  ++ GR I VS  R
Sbjct: 129 QKDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFAR 171

>TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA binding |
        chr3:19421619-19422855 FORWARD

          Length = 330

 Score =  53 bits (126), Expect = 2e-007
 Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
 Frame = +1

Query: 262 EEAGALREMQAKAEKEMGADQDPSGAISSAEKEEVDSRS------IYVGNVDYACTPEEV 423
           E + A  E+QA  E+E   +++        E+E+  +++      +YVGN+ Y  T  E+
Sbjct:  73 EASSADDEIQASVEEEEEVEEEGDEGEEEVEEEKQTTQASGEEGRLYVGNLPYTITSSEL 132

Query: 424 QQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVE-EDAVQNSLILNESELHGRQIKVS 591
            Q F   GTV  V I+ DK   + +GF +V     E+A +   + N S++ GR +KV+
Sbjct: 133 SQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVN 190

>TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine-rich
        RNA-binding protein 5); ATP binding / RNA binding |
        chr1:27915346-27916857 FORWARD

          Length = 290

 Score =  49 bits (116), Expect = 3e-006
 Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
 Frame = +1

Query: 364 VDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEEDAVQN 540
           + S  I+VG + Y+     +++ F   G V    I+ D+  G+ +GFA+V F   +   N
Sbjct:  31 MSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASN 90

Query: 541 SLILNESELHGRQIKV--SAKRTNVPGMRQFRG 633
           ++ L+  +LHGR+I+V  + +R +  G R F G
Sbjct:  91 AMQLDGQDLHGRRIRVNYATERGSGFGGRGFGG 123

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,628,668,842
Number of Sequences: 33410
Number of Extensions: 22628668842
Number of Successful Extensions: 713028804
Number of sequences better than 0.0: 0