BLASTX 7.6.2
Query= UN47288 /QuerySize=1347
(1346 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q3SWZ6|SBDS_BOVIN Ribosome maturation protein SBDS OS=Bos tau... 262 7e-069
sp|Q5ZIY4|SBDS_CHICK Ribosome maturation protein SBDS OS=Gallus ... 261 1e-068
sp|P70122|SBDS_MOUSE Ribosome maturation protein SBDS OS=Mus mus... 259 4e-068
sp|Q5RK30|SBDS_RAT Ribosome maturation protein SBDS OS=Rattus no... 259 4e-068
sp|Q9Y3A5|SBDS_HUMAN Ribosome maturation protein SBDS OS=Homo sa... 257 1e-067
sp|Q5RAZ2|SBDS_PONAB Ribosome maturation protein SBDS OS=Pongo a... 257 1e-067
sp|A5D8M6|SBDS_XENLA Ribosome maturation protein SBDS OS=Xenopus... 257 1e-067
sp|Q6DIT8|SBDS_XENTR Ribosome maturation protein SBDS OS=Xenopus... 257 2e-067
sp|Q86KZ5|SBDS_DICDI Ribosome maturation protein SBDS OS=Dictyos... 228 7e-059
sp|Q23202|SBDS_CAEEL Ribosome maturation protein SBDS OS=Caenorh... 225 1e-057
sp|O14179|SDO1_SCHPO Ribosome maturation protein sdo1 OS=Schizos... 197 2e-049
sp|Q07953|SDO1_YEAST Ribosome maturation protein SDO1 OS=Sacchar... 154 2e-036
sp|Q58011|SDO1_METJA Ribosome maturation protein SDO1 homolog OS... 99 5e-020
sp|O59220|SDO1_PYRHO Ribosome maturation protein SDO1 homolog OS... 94 2e-018
sp|Q9V121|SDO1_PYRAB Ribosome maturation protein SDO1 homolog OS... 93 5e-018
sp|Q9YCU5|SDO1_AERPE Ribosome maturation protein SDO1 homolog OS... 89 9e-017
sp|Q8SUL0|SDO1_ENCCU Ribosome maturation protein SDO1 OS=Encepha... 82 6e-015
sp|Q90Y35|ZN622_CHICK Zinc finger protein 622 OS=Gallus gallus G... 53 4e-006
>sp|Q3SWZ6|SBDS_BOVIN Ribosome maturation protein SBDS OS=Bos taurus GN=SBDS
PE=2 SV=1
Length = 250
Score = 262 bits (667), Expect = 7e-069
Identities = 128/250 (51%), Positives = 179/250 (71%), Gaps = 4/250 (1%)
Frame = +1
Query: 67 TLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVS 246
++ P Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKD+DEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61
Query: 247 KGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSGQFRDIATIVMQKTIN 426
KG +AK +DLI FG+DD T+IC +IL KGE+QV+ KER +QL FRDIATIV K +N
Sbjct: 62 KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121
Query: 427 PETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 606
PET+RPYT+ ++ER M +IH++V PN ++K+QAL+VI++L++ I+R+ MRLR +P
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181
Query: 607 NFSSLLEKLKEWDASLVSKDESGTHMSTVCEMEPGLYRECDSLVRNM---QGRLEILAVS 777
L EKLK ++ ++ G + VC ++PG +RE D L++ +G LE+L++
Sbjct: 182 EGKKLKEKLKPL-IKVIESEDYGQQLEIVCLIDPGCFREVDELIKKETKGKGSLEVLSLK 240
Query: 778 VHAEGDTSMD 807
EGD +
Sbjct: 241 DVEEGDEKFE 250
>sp|Q5ZIY4|SBDS_CHICK Ribosome maturation protein SBDS OS=Gallus gallus GN=SBDS
PE=2 SV=1
Length = 250
Score = 261 bits (665), Expect = 1e-068
Identities = 128/250 (51%), Positives = 180/250 (72%), Gaps = 4/250 (1%)
Frame = +1
Query: 67 TLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVS 246
++ P Q RLTNVAVVR ++ G RFEIACY+NKV+ WRSG EKDIDEVLQ+HTV+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRARRAGKRFEIACYRNKVMGWRSGAEKDIDEVLQTHTVFVNVS 61
Query: 247 KGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSGQFRDIATIVMQKTIN 426
KG +AK +DL++ FG+DD T+IC IL KGELQV+ KER++QL FRDIATIV K +N
Sbjct: 62 KGQVAKKEDLVRAFGTDDQTEICKVILSKGELQVSDKERQTQLEQMFRDIATIVADKCVN 121
Query: 427 PETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 606
PET+RPYT+ ++ER M +IH++V PN ++K+QAL+VIR+L++ I+R+ MRLR +P +
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIRQLKETMQIERAHMRLRFILPVK 181
Query: 607 NFSSLLEKLKEWDASLVSKDESGTHMSTVCEMEPGLYRECDSLVRNM---QGRLEILAVS 777
L EKLK ++ ++ + VC ++PG +RE D L+R+ +G LE+L++
Sbjct: 182 EGKKLKEKLKPL-IKVIENEDFHDQLEIVCLIDPGCFREIDELIRSETKGKGTLEVLSLK 240
Query: 778 VHAEGDTSMD 807
EGD ++
Sbjct: 241 DVEEGDEKLE 250
>sp|P70122|SBDS_MOUSE Ribosome maturation protein SBDS OS=Mus musculus GN=Sbds
PE=2 SV=4
Length = 250
Score = 259 bits (661), Expect = 4e-068
Identities = 128/250 (51%), Positives = 178/250 (71%), Gaps = 4/250 (1%)
Frame = +1
Query: 67 TLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVS 246
++ P Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKD+DEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61
Query: 247 KGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSGQFRDIATIVMQKTIN 426
KG +AK +DLI FG+DD T+IC +IL KGE+QV+ KER +QL FRDIATIV K +N
Sbjct: 62 KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121
Query: 427 PETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 606
PET+RPYT+ ++ER M +IH++V PN ++K+QAL+VI++L++ I+R+ MRLR +P
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181
Query: 607 NFSSLLEKLKEWDASLVSKDESGTHMSTVCEMEPGLYRECDSLVRNM---QGRLEILAVS 777
L EKLK +V ++ + VC ++PG +RE D L++ +G LE+L++
Sbjct: 182 EGKKLKEKLKPL-MKVVESEDYSQQLEIVCLIDPGCFREIDELIKKETKGRGSLEVLSLK 240
Query: 778 VHAEGDTSMD 807
EGD +
Sbjct: 241 DVEEGDEKFE 250
>sp|Q5RK30|SBDS_RAT Ribosome maturation protein SBDS OS=Rattus norvegicus
GN=Sbds PE=2 SV=1
Length = 250
Score = 259 bits (661), Expect = 4e-068
Identities = 128/250 (51%), Positives = 178/250 (71%), Gaps = 4/250 (1%)
Frame = +1
Query: 67 TLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVS 246
++ P Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKD+DEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61
Query: 247 KGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSGQFRDIATIVMQKTIN 426
KG +AK +DLI FG+DD T+IC +IL KGE+QV+ KER +QL FRDIATIV K +N
Sbjct: 62 KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121
Query: 427 PETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 606
PET+RPYT+ ++ER M +IH++V PN ++K+QAL+VI++L++ I+R+ MRLR +P
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFLLPVN 181
Query: 607 NFSSLLEKLKEWDASLVSKDESGTHMSTVCEMEPGLYRECDSLVRNM---QGRLEILAVS 777
L EKLK +V ++ + VC ++PG +RE D L++ +G LE+L++
Sbjct: 182 EGKKLKEKLKPL-MKVVESEDYSQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLSLK 240
Query: 778 VHAEGDTSMD 807
EGD +
Sbjct: 241 DVEEGDEKFE 250
>sp|Q9Y3A5|SBDS_HUMAN Ribosome maturation protein SBDS OS=Homo sapiens GN=SBDS
PE=1 SV=4
Length = 250
Score = 257 bits (656), Expect = 1e-067
Identities = 127/250 (50%), Positives = 177/250 (70%), Gaps = 4/250 (1%)
Frame = +1
Query: 67 TLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVS 246
++ P Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKD+DEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61
Query: 247 KGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSGQFRDIATIVMQKTIN 426
KG +AK +DLI FG+DD T+IC +IL KGE+QV+ KER +QL FRDIATIV K +N
Sbjct: 62 KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121
Query: 427 PETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 606
PET+RPYT+ ++ER M +IH++V N ++K+QAL+VI++L++ I+R+ MRLR +P
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181
Query: 607 NFSSLLEKLKEWDASLVSKDESGTHMSTVCEMEPGLYRECDSLVRNM---QGRLEILAVS 777
L EKLK ++ ++ G + VC ++PG +RE D L++ +G LE+L +
Sbjct: 182 EGKKLKEKLKPL-IKVIESEDYGQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLK 240
Query: 778 VHAEGDTSMD 807
EGD +
Sbjct: 241 DVEEGDEKFE 250
>sp|Q5RAZ2|SBDS_PONAB Ribosome maturation protein SBDS OS=Pongo abelii GN=SBDS
PE=2 SV=1
Length = 250
Score = 257 bits (656), Expect = 1e-067
Identities = 127/250 (50%), Positives = 177/250 (70%), Gaps = 4/250 (1%)
Frame = +1
Query: 67 TLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVS 246
++ P Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKD+DEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61
Query: 247 KGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSGQFRDIATIVMQKTIN 426
KG +AK +DLI FG+DD T+IC +IL KGE+QV+ KER +QL FRDIATIV K +N
Sbjct: 62 KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121
Query: 427 PETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 606
PET+RPYT+ ++ER M +IH++V N ++K+QAL+VI++L++ I+R+ MRLR +P
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181
Query: 607 NFSSLLEKLKEWDASLVSKDESGTHMSTVCEMEPGLYRECDSLVRNM---QGRLEILAVS 777
L EKLK ++ ++ G + VC ++PG +RE D L++ +G LE+L +
Sbjct: 182 EGKKLKEKLKPL-IKVIESEDYGQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLK 240
Query: 778 VHAEGDTSMD 807
EGD +
Sbjct: 241 DVEEGDEKFE 250
>sp|A5D8M6|SBDS_XENLA Ribosome maturation protein SBDS OS=Xenopus laevis GN=sbds
PE=2 SV=1
Length = 250
Score = 257 bits (656), Expect = 1e-067
Identities = 130/250 (52%), Positives = 178/250 (71%), Gaps = 4/250 (1%)
Frame = +1
Query: 67 TLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVS 246
++ P Q RLTNVAVVR+KK G RFEIACYKNKV+SWRSG EKD+DEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTHSVFMNVS 61
Query: 247 KGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSGQFRDIATIVMQKTIN 426
KG AK +DL+K FG++D T+IC +IL KGELQV+ KER +QL FRDIATIV K +N
Sbjct: 62 KGQGAKKEDLLKAFGTEDQTEICKQILSKGELQVSEKERSTQLEQMFRDIATIVADKCVN 121
Query: 427 PETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 606
PET+RPYT++++ER M +IH++V ++K+QALDVI++L++ I+R+ MRLR VPA+
Sbjct: 122 PETKRPYTVNLIERAMKDIHYSVKATKSTKQQALDVIKQLKETMQIERAHMRLRFIVPAK 181
Query: 607 NFSSLLEKLKEWDASLVSKDESGTHMSTVCEMEPGLYRECDSLVR---NMQGRLEILAVS 777
+ L EKLK + + + VC ++PG +RE D L+R +G LE+L++
Sbjct: 182 DGKKLKEKLKPL-IKHIESENFDQELEIVCLIDPGCFREIDELIRCETKGKGTLEVLSLK 240
Query: 778 VHAEGDTSMD 807
EGD +
Sbjct: 241 DVEEGDEKFE 250
>sp|Q6DIT8|SBDS_XENTR Ribosome maturation protein SBDS OS=Xenopus tropicalis
GN=sbds PE=2 SV=1
Length = 250
Score = 257 bits (654), Expect = 2e-067
Identities = 132/253 (52%), Positives = 181/253 (71%), Gaps = 10/253 (3%)
Frame = +1
Query: 67 TLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVS 246
++ P Q RLTNVAVVR+KK G RFEIACYKNKV+SWRSG EKD+DEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTHSVFMNVS 61
Query: 247 KGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSGQFRDIATIVMQKTIN 426
KG +AK +DL+K FG++D T+IC +IL KGELQV+ KER +QL FRDIATIV K +N
Sbjct: 62 KGQVAKKEDLLKSFGTEDPTEICKQILSKGELQVSEKERSTQLEQMFRDIATIVADKCVN 121
Query: 427 PETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 606
PET+RPYT++++ER M +IH++V ++K+QALDVI++L++ I+R+ MRLR +PA+
Sbjct: 122 PETKRPYTVNLIERAMKDIHYSVKATKSTKQQALDVIKQLKETMQIERAHMRLRFILPAK 181
Query: 607 NFSSLLEKLKEWDASLVSKDES---GTHMSTVCEMEPGLYRECDSLVR---NMQGRLEIL 768
+ L EKLK L+ ES + VC ++PG +RE D L+R +G LE+L
Sbjct: 182 DGKKLKEKLK----PLIKHTESENFDQELEIVCLIDPGCFREIDELIRCETKGKGTLEVL 237
Query: 769 AVSVHAEGDTSMD 807
++ EGD +
Sbjct: 238 SLKDVEEGDEKFE 250
>sp|Q86KZ5|SBDS_DICDI Ribosome maturation protein SBDS OS=Dictyostelium
discoideum GN=sbds PE=3 SV=2
Length = 274
Score = 228 bits (581), Expect = 7e-059
Identities = 111/251 (44%), Positives = 176/251 (70%), Gaps = 4/251 (1%)
Frame = +1
Query: 67 TLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVS 246
++ PV K LTN+ VVR KK +FEIACY +KV S+RS +EKD++EV+Q H ++TNVS
Sbjct: 2 SIFTPVNNKTLTNIVVVRYKKGAAKFEIACYPSKVQSYRSKIEKDLNEVIQIHRIFTNVS 61
Query: 247 KGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSGQFRDIATIVMQKTIN 426
KG++AK +LIK FG+D+ +I L ILEKGELQV+ KER++Q F+DIATIV +K +N
Sbjct: 62 KGIIAKKDELIKAFGTDNEQEIILLILEKGELQVSSKERDNQSEQTFKDIATIVAEKCVN 121
Query: 427 PETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 606
ETQRP +S++E+ M ++H+++ P +SK+Q+L+VI+++ PI+R+ MRL +T+P +
Sbjct: 122 TETQRPIPVSIIEKAMKDVHYSIHPTKSSKQQSLEVIKQISSVIPIQRAQMRLNITIPTK 181
Query: 607 NFSSL-LEKLKEWDASLVSKDESGTHMSTVCEMEPGLYRECDSLVRNM---QGRLEILAV 774
+L +KL + + +D G +S VC ++PG YR+ D L++ +G ++I+ +
Sbjct: 182 ESKTLNRDKLMVLVSKIEEEDRDGGGLSIVCLVDPGSYRKIDELIKQETKGKGFIDIINL 241
Query: 775 SVHAEGDTSMD 807
+V EG+T ++
Sbjct: 242 AVAKEGETKIN 252
>sp|Q23202|SBDS_CAEEL Ribosome maturation protein SBDS OS=Caenorhabditis elegans
GN=sbds-1 PE=2 SV=2
Length = 253
Score = 225 bits (571), Expect = 1e-057
Identities = 114/249 (45%), Positives = 169/249 (67%), Gaps = 3/249 (1%)
Frame = +1
Query: 58 MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYT 237
MSK + P QK LTNVAVVR+KK G RFEIACYKNKV++WR+ EKDIDEVLQ+HTV++
Sbjct: 1 MSKNIKTPTNQKVLTNVAVVRMKKTGKRFEIACYKNKVVNWRNKSEKDIDEVLQTHTVFS 60
Query: 238 NVSKGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSGQFRDIATIVMQK 417
NVSKG L+K ++LI FG +D +IC IL+KG+LQV+ KER++ ++++ ++
Sbjct: 61 NVSKGQLSKKEELIAAFGIEDQLEICKIILDKGDLQVSEKERQAASDQSLKEVSQLIASM 120
Query: 418 TINPETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTV 597
+NPET+RP S++++ + E+HF++ PN +SK+QALD I +L++ I+R+ M++R+ +
Sbjct: 121 VVNPETKRPVPPSVIDKALQEMHFSLKPNRSSKQQALDAIPKLRETLKIERAKMKIRVAI 180
Query: 598 PAQNFSSLLEKLKEWDASLVSKDESGTHMSTVCEMEPGLYRECDSLVRNM---QGRLEIL 768
P + S+ KLK + + D + V +EPG +R D LVRN GRLEIL
Sbjct: 181 PTKEAKSVHTKLKTLFSDVEVDDWQDGSLEMVGLIEPGSFRALDDLVRNETKGHGRLEIL 240
Query: 769 AVSVHAEGD 795
++ EG+
Sbjct: 241 SLKDVVEGE 249
>sp|O14179|SDO1_SCHPO Ribosome maturation protein sdo1 OS=Schizosaccharomyces
pombe GN=sdo1 PE=2 SV=1
Length = 246
Score = 197 bits (499), Expect = 2e-049
Identities = 105/239 (43%), Positives = 154/239 (64%), Gaps = 6/239 (2%)
Frame = +1
Query: 76 QPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVSKGV 255
QPVGQ RLTNV+VV+ KK G RFE+ACYKNKV WR+ +E D+DEVLQ H V+ NVSKG
Sbjct: 5 QPVGQIRLTNVSVVKYKKGGKRFEVACYKNKVTEWRNKIETDLDEVLQIHNVFNNVSKGH 64
Query: 256 LAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSGQFRDIATIVMQKTINPET 435
+A +DL K FG+DD KI LEIL+KG+ QV KER Q+S +RDI + V ++P +
Sbjct: 65 VASRQDLKKAFGTDDIDKIILEILQKGDFQVGEKERHHQMSSTYRDIVSHVTAMCMDPNS 124
Query: 436 QRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQK--HFPIKRSPMRLRLTVPAQN 609
+RPY S++E+ + + F+V + +K QAL+ I++LQ+ PI R+ MR+R+ V +
Sbjct: 125 KRPYPASIIEKALSDCGFSVSTSKTAKSQALEAIKKLQEKNEIPIVRARMRIRIVVDVKQ 184
Query: 610 FSSLLEKLKEWDASLVSKDESGTHMSTVCEMEPGLYRECDSLVRN---MQGRLEILAVS 777
+L E+L+ A + ++ + + PG Y+ D LVRN +G +++L +S
Sbjct: 185 GKALRERLRSL-ADEIEEENIDDEYECIALVIPGNYKLIDELVRNETKNRGMVQVLDMS 242
>sp|Q07953|SDO1_YEAST Ribosome maturation protein SDO1 OS=Saccharomyces
cerevisiae GN=SDO1 PE=1 SV=1
Length = 250
Score = 154 bits (388), Expect = 2e-036
Identities = 91/241 (37%), Positives = 151/241 (62%), Gaps = 8/241 (3%)
Frame = +1
Query: 76 QPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVSKGV 255
QP GQ +LTNV++VRLKK RFE+ACY+NKV +R G+EKD+DEVLQ H V+ NVSKG+
Sbjct: 5 QPSGQIKLTNVSLVRLKKARKRFEVACYQNKVQDYRKGIEKDLDEVLQIHQVFMNVSKGL 64
Query: 256 LAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSGQFRDIATIVMQKTINPET 435
+A +DL K FG+ + + EI+ KGE+Q++ KER+ L+ ++ TIV K INP +
Sbjct: 65 VANKEDLQKCFGTTNVDDVIEEIMHKGEIQLSEKERQLMLNKVNNEMLTIVSAKCINPVS 124
Query: 436 QRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIREL--QKHFPIKRSPMRLRLTV--PA 603
++ Y +M+ + + E+ F+ N +K QAL+ I+ L ++ PI R+ M++++ + P+
Sbjct: 125 KKRYPPTMIHKALQELKFSPVINKPAKLQALEAIKLLVSKQIIPIVRAKMKVKVAISEPS 184
Query: 604 QNFSSLLEKLKEWDASLVSKDESGTHMSTVCE--MEPGLYRECDSLVRNMQGRLEILAVS 777
+ L+EK+ + AS + C ++P YR+ +L + +G +++L ++
Sbjct: 185 RQ-PELIEKISKLIASSPGESTKPELDPWTCTGLIDPVNYRDLMTLC-DKKGTVQVLDMA 242
Query: 778 V 780
V
Sbjct: 243 V 243
>sp|Q58011|SDO1_METJA Ribosome maturation protein SDO1 homolog
OS=Methanocaldococcus jannaschii GN=MJ0592 PE=3 SV=1
Length = 240
Score = 99 bits (246), Expect = 5e-020
Identities = 56/209 (26%), Positives = 104/209 (49%)
Frame = +1
Query: 97 LTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVSKGVLAKSKDL 276
L + R G +FEI + G D DE+L V+ + SKG A + L
Sbjct: 9 LEEAVIARYTSHGEKFEILVDPYLAAKLKEGQNVDFDELLAIEVVFRDASKGEKAPEELL 68
Query: 277 IKVFGSDDHTKICLEILEKGELQVAGKERESQLSGQFRDIATIVMQKTINPETQRPYTIS 456
K+FG+ D +I +I+ KG++Q+ K+RE + R I TI+ + TINP+T P+
Sbjct: 69 SKIFGTTDVKEIAKKIILKGQVQLTAKQREEIREQKKRQIITIISRNTINPQTDTPHPPH 128
Query: 457 MVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQNFSSLLEKLK 636
+E+ M E+ +D ++++Q +++++L+K PI+ + + +PA+ S L
Sbjct: 129 RIEKAMEELRINIDIYKSAEEQVPEIVKKLKKVLPIRFEKRDIAVKIPAEFASKAYNALY 188
Query: 637 EWDASLVSKDESGTHMSTVCEMEPGLYRE 723
++ A + + + + E+ G+ E
Sbjct: 189 QFGAVKQEEWQPDGSLIVLIEIPSGIEAE 217
>sp|O59220|SDO1_PYRHO Ribosome maturation protein SDO1 homolog OS=Pyrococcus
horikoshii GN=PH1552 PE=3 SV=1
Length = 236
Score = 94 bits (233), Expect = 2e-018
Identities = 61/223 (27%), Positives = 116/223 (52%), Gaps = 9/223 (4%)
Frame = +1
Query: 112 VVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVSKGVLAKSKDLIKVFG 291
+ RLK QG FEI ++ G I+E+L + V+ + KG A K++ K+FG
Sbjct: 10 IARLKIQGETFEILVDPYLARDFKEGKNVPIEEILATPYVFKDAHKGDKASEKEMEKIFG 69
Query: 292 SDDHTKICLEILEKGELQVAGKERESQLSGQFRDIATIVMQKTINPETQRPYTISMVERL 471
+ D ++ IL+KGE+Q+ ++R L + R IATI+ + ++P T P+ + + R
Sbjct: 70 TSDPYEVAKIILKKGEVQLTAQQRREMLEEKKRQIATIIHKHAVDPRTGYPHPVDRILRA 129
Query: 472 MHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQNFSSLLEKLKEWDAS 651
M E+ VD +++ Q DVI+ L++ P++ + + +P + +++++
Sbjct: 130 MEEVGVRVDIFKDAEAQVQDVIKALRRVLPLRIEMKVIAVKIPGEYVGRSYGEVRKF--G 187
Query: 652 LVSKDESGTHMSTVCEME-PG-----LYRECDSLVR-NMQGRL 759
+ K+E G+ S + +E PG Y + ++L + N Q +L
Sbjct: 188 RIKKEEWGSDGSWMFLIEIPGGVEEEFYEKLNALTKGNAQTKL 230
>sp|Q9V121|SDO1_PYRAB Ribosome maturation protein SDO1 homolog OS=Pyrococcus
abyssi GN=PYRAB06080 PE=3 SV=1
Length = 236
Score = 93 bits (229), Expect = 5e-018
Identities = 48/165 (29%), Positives = 89/165 (53%)
Frame = +1
Query: 112 VVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVSKGVLAKSKDLIKVFG 291
+ RLK G FEI ++ G E I+E+L + V+ + KG A K++ K+FG
Sbjct: 10 IARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKASEKEMEKIFG 69
Query: 292 SDDHTKICLEILEKGELQVAGKERESQLSGQFRDIATIVMQKTINPETQRPYTISMVERL 471
+ D ++ IL KGE+Q+ ++R L + R IATI+ + ++P T P+ + + R
Sbjct: 70 TSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYPHPVDRILRA 129
Query: 472 MHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 606
M E+ VD +++ Q DVI+ +++ P++ + + +P++
Sbjct: 130 MEEVGVRVDIFKDAEAQVQDVIKAIRRILPLRIEMKVIAVKIPSE 174
>sp|Q9YCU5|SDO1_AERPE Ribosome maturation protein SDO1 homolog OS=Aeropyrum
pernix GN=APE_1167.1 PE=3 SV=2
Length = 233
Score = 89 bits (218), Expect = 9e-017
Identities = 43/163 (26%), Positives = 92/163 (56%)
Frame = +1
Query: 112 VVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVSKGVLAKSKDLIKVFG 291
V ++ +G RFEI ++ + D+++VL + T+Y +V KG+ A +++ K FG
Sbjct: 9 VAWMEVRGKRFEILVRPELAFRYKEKGDVDLEDVLWTDTIYRDVRKGLKASPEEVKKAFG 68
Query: 292 SDDHTKICLEILEKGELQVAGKERESQLSGQFRDIATIVMQKTINPETQRPYTISMVERL 471
+ D ++ +IL++GE+Q+ ++R L + R I + + + I+P T RP + +E
Sbjct: 69 TSDPRRVAEKILKEGEIQLTEEQRRRLLEAKRRQIISYIARNAIDPTTGRPIPEARIEAA 128
Query: 472 MHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVP 600
+ E+ F ++ +++ QA++ +R + + PI+ + L + +P
Sbjct: 129 LEEVRFPINLWRDAESQAVEAVRLIARVMPIRLARALLEVKIP 171
>sp|Q8SUL0|SDO1_ENCCU Ribosome maturation protein SDO1 OS=Encephalitozoon
cuniculi GN=SDO1 PE=1 SV=1
Length = 223
Score = 82 bits (202), Expect = 6e-015
Identities = 55/160 (34%), Positives = 91/160 (56%), Gaps = 10/160 (6%)
Frame = +1
Query: 79 PVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVSKGVL 258
P+ QK+L NV++V LKK G R+E+A Y NK+ +R+G+ + E+LQ+ T+Y +VSKG +
Sbjct: 4 PLNQKKLVNVSIVTLKKFGRRYELAVYPNKLYEYRNGMRTPLSEILQTDTIYRSVSKGEI 63
Query: 259 AKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSGQFRDIATIVMQKTINPETQ 438
A+ DL +F H +I EIL+ G Q + R + R+I I+ K + +
Sbjct: 64 ARQGDL-DLF-CRTHEEIVREILDCGYEQKSEATRVYEQEKTEREIVQILRNK-VTRGGR 120
Query: 439 RPYTISMVERL--MHEIHFAVDPNSNSKKQALDVIRELQK 552
S+ E + +H I+ NSKKQ+ +++ +L+K
Sbjct: 121 HLSEASLREAIGKVHNIYV-----GNSKKQSQEILSKLEK 155
>sp|Q90Y35|ZN622_CHICK Zinc finger protein 622 OS=Gallus gallus GN=ZNF622 PE=2
SV=1
Length = 405
Score = 53 bits (126), Expect = 4e-006
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +1
Query: 970 CSTCNTFVGEAKQYREHFKTDWHKHNLKRKTRKLPPLTAEECSAEV 1107
C TC +A R H+KTDWH++NLKRK +PP+TAE V
Sbjct: 6 CITCRVAFKDADIQRAHYKTDWHRYNLKRKVADMPPVTAENFQERV 51
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 177,416,216,708
Number of Sequences: 518415
Number of Extensions: 177416216708
Number of Successful Extensions: 1076203161
Number of sequences better than 0.0: 0
|
