BLASTX 7.6.2
Query= UN47321 /QuerySize=1103
(1102 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G12130.1 | Symbols: | KH domain-containing pr... 422 3e-118
TAIR9_protein||AT5G06770.1 | Symbols: | KH domain-containing pr... 359 3e-099
TAIR9_protein||AT1G32360.1 | Symbols: | zinc finger (CCCH-type)... 55 9e-008
>TAIR9_protein||AT3G12130.1 | Symbols: | KH domain-containing protein / zinc
finger (CCCH type) family protein | chr3:3864486-3866406 REVERSE
Length = 249
Score = 422 bits (1083), Expect = 3e-118
Identities = 214/254 (84%), Positives = 230/254 (90%), Gaps = 12/254 (4%)
Frame = +1
Query: 121 RKRGRPEAADSFNSNGGGGGFKKSKQEMESYSTGLGSKSKPCTKFFITSGCPFGDNCHFL 300
RKRGRPEA SFNSN GGG+KKSKQEMESYSTGLGSKSKPCTKFF TSGCPFG+NCHFL
Sbjct: 4 RKRGRPEAG-SFNSN--GGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60
Query: 301 HYVPGGYNAVAQLTNMA-PMPQASRNMQGSGGGGGGGRFSGRGGGESGPGHVSSFGASAT 477
HYVPGGYNAV+Q+TNM P+PQ SRNMQGS G GGRFSGR GESGPGHVS+FG SAT
Sbjct: 61 HYVPGGYNAVSQMTNMGPPIPQVSRNMQGS---GNGGRFSGR--GESGPGHVSNFGDSAT 115
Query: 478 AKISVDASLAGAIIGKGGVSSKQICRQTGAKLSIQDHERDPNLKNIELEGTFEQINEASA 657
A+ SVDASLAGAIIGKGGVSSKQICRQTG KLSIQDHERDPNLKNI LEGT EQI+EASA
Sbjct: 116 ARFSVDASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASA 175
Query: 658 MVRELIGRLNSAASRRPPGGGGGGLGGGGVGFEGKPHPGSNFKTKMCERFAKGNCTFGDR 837
MV++LIGRLNSAA ++PPGGG G GGGG+G EGKPHPGSNFKTK+CERF+KGNCTFGDR
Sbjct: 176 MVKDLIGRLNSAA-KKPPGGGLG--GGGGMGSEGKPHPGSNFKTKICERFSKGNCTFGDR 232
Query: 838 CHFAHGEAELRRSG 879
CHFAHGEAELR+SG
Sbjct: 233 CHFAHGEAELRKSG 246
Score = 413 bits (1061), Expect = 1e-115
Identities = 208/249 (83%), Positives = 224/249 (89%), Gaps = 11/249 (4%)
Frame = +1
Query: 145 ADSFNSNGGGGGFKKSKQEMESYSTGLGSKSKPCTKFFITSGCPFGDNCHFLHYVPGGYN 324
A SFNSN GGG+KKSKQEMESYSTGLGSKSKPCTKFF TSGCPFG+NCHFLHYVPGGYN
Sbjct: 11 AGSFNSN--GGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFLHYVPGGYN 68
Query: 325 AVAQLTNMA-PMPQASRNMQGSGGGGGGGRFSGRGGGESGPGHVSSFGASATAKISVDAS 501
AV+Q+TNM P+PQ SRNMQGS G GGRFSGR GESGPGHVS+FG SATA+ SVDAS
Sbjct: 69 AVSQMTNMGPPIPQVSRNMQGS---GNGGRFSGR--GESGPGHVSNFGDSATARFSVDAS 123
Query: 502 LAGAIIGKGGVSSKQICRQTGAKLSIQDHERDPNLKNIELEGTFEQINEASAMVRELIGR 681
LAGAIIGKGGVSSKQICRQTG KLSIQDHERDPNLKNI LEGT EQI+EASAMV++LIGR
Sbjct: 124 LAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLIGR 183
Query: 682 LNSAASRRPPGGGGGGLGGGGVGFEGKPHPGSNFKTKMCERFAKGNCTFGDRCHFAHGEA 861
LNSAA ++PPGGG G GGGG+G EGKPHPGSNFKTK+CERF+KGNCTFGDRCHFAHGEA
Sbjct: 184 LNSAA-KKPPGGGLG--GGGGMGSEGKPHPGSNFKTKICERFSKGNCTFGDRCHFAHGEA 240
Query: 862 ELRRSGIA* 888
ELR+SGI *
Sbjct: 241 ELRKSGIV* 249
>TAIR9_protein||AT5G06770.1 | Symbols: | KH domain-containing protein / zinc
finger (CCCH type) family protein | chr5:2090937-2092787 REVERSE
Length = 241
Score = 359 bits (919), Expect = 3e-099
Identities = 188/246 (76%), Positives = 204/246 (82%), Gaps = 20/246 (8%)
Frame = +1
Query: 121 RKRGRPEAADSFNSNGGGGGFKKSKQEMESYSTGLGSKSKPCTKFFITSGCPFGDNCHFL 300
RKRGRPEAA S NSN GGFK+SKQEMES STGLGSKSKPCTKFF TSGCPFGDNCHFL
Sbjct: 4 RKRGRPEAAASHNSN---GGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60
Query: 301 HYVPGGYNAVAQLTNM-APMPQASRNMQGSGGGGGGGRFSGRGGGESGPGHVSSFGASAT 477
HYVPGGYNA AQ+TN+ P+ Q SRNMQGS GG GGRFSGRG SGP VS FGAS T
Sbjct: 61 HYVPGGYNAAAQMTNLRPPVSQVSRNMQGS--GGPGGRFSGRGDPGSGP--VSIFGAS-T 115
Query: 478 AKISVDASLAGAIIGKGGVSSKQICRQTGAKLSIQDHERDPNLKNIELEGTFEQINEASA 657
+KISVDASLAGAIIGKGG+ SKQICR+TGAKLSI+DHERDPNLK IELEGTFEQIN AS
Sbjct: 116 SKISVDASLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASG 175
Query: 658 MVRELIGRLNSAASRRPPGGGGGGLGGGGVGFEGKPHPGSNFKTKMCERFAKGNCTFGDR 837
MVRELIGRL S ++P G GG EGKPHPGSN+KTK+C+R++KGNCT+GDR
Sbjct: 176 MVRELIGRLGSV--KKPQGIGGP---------EGKPHPGSNYKTKICDRYSKGNCTYGDR 224
Query: 838 CHFAHG 855
CHFAHG
Sbjct: 225 CHFAHG 230
Score = 94 bits (232), Expect = 1e-019
Identities = 40/54 (74%), Positives = 48/54 (88%), Gaps = 4/54 (7%)
Frame = +1
Query: 727 GLGGGGVGFEGKPHPGSNFKTKMCERFAKGNCTFGDRCHFAHGEAELRRSGIA* 888
G+GG EGKPHPGSN+KTK+C+R++KGNCT+GDRCHFAHGE+ELRRSGIA*
Sbjct: 192 GIGGP----EGKPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSGIA* 241
>TAIR9_protein||AT1G32360.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr1:11673325-11675162 FORWARD
Length = 385
Score = 55 bits (130), Expect = 9e-008
Identities = 29/57 (50%), Positives = 36/57 (63%), Gaps = 5/57 (8%)
Frame = +1
Query: 712 GGGGGGLGGGGVGFEGKPHPGSNFKTKMCERF-AKGNCTFGDRCHFAHGEAELRRSG 879
GGGGG G G+ KP SN+KT++C ++ G C FG +CHFAHG AEL R G
Sbjct: 242 GGGGGSGSGSGIQIL-KP---SNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRFG 294
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,628,668,842
Number of Sequences: 33410
Number of Extensions: 22628668842
Number of Successful Extensions: 713028804
Number of sequences better than 0.0: 0
|
