BLASTX 7.6.2
Query= UN47391 /QuerySize=874
(873 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G44065.1 | Symbols: | ribosomal protein L2 fa... 320 9e-088
TAIR9_protein||AT2G44065.2 | Symbols: | ribosomal protein L2 fa... 320 9e-088
TAIR9_protein||ATCG00830.1 | Symbols: RPL2.1 | encodes a chlorop... 124 1e-028
TAIR9_protein||ATCG01310.1 | Symbols: RPL2.2 | encodes a chlorop... 124 1e-028
TAIR9_protein||AT3G51190.1 | Symbols: | structural constituent ... 86 4e-017
TAIR9_protein||AT2G18020.1 | Symbols: EMB2296 | EMB2296 (embryo ... 79 3e-015
TAIR9_protein||AT4G36130.1 | Symbols: | 60S ribosomal protein L... 76 2e-014
>TAIR9_protein||AT2G44065.1 | Symbols: | ribosomal protein L2 family protein |
chr2:18228860-18230368 FORWARD
Length = 215
Score = 320 bits (819), Expect = 9e-088
Identities = 155/169 (91%), Positives = 160/169 (94%), Gaps = 1/169 (0%)
Frame = -3
Query: 652 KKKMLHMDINSMIGSSMPPGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKILKEPASGKC 473
K++MLHMDINSMIGSSMP GMMRIGTIIHNIEMNPGQGAK+VRAAGTNAKILKEPA GKC
Sbjct: 47 KEEMLHMDINSMIGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKC 106
Query: 472 LIKLPSGDTRWINARCRATIGTVSNPSHGVKKLYKAGQSRWLGIRPKVRGVAMNPCDHPH 293
LIKLPSGDT+WINA+CRATIGTVSNPSHG KKLYKAGQSRWLGIRPKVRGVAMNPCDHPH
Sbjct: 107 LIKLPSGDTKWINAKCRATIGTVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPH 166
Query: 292 GGGEGKSKSSGSRGRTSVSPWGKPCKGGYKFASV-KKKKRLAAREAKM* 149
GGGEGKSKSSGSRGRTSVSPWGKPCKGGYK ASV KKKKRLA AKM*
Sbjct: 167 GGGEGKSKSSGSRGRTSVSPWGKPCKGGYKSASVKKKKKRLAEAAAKM* 215
Score = 73 bits (178), Expect = 2e-013
Identities = 36/50 (72%), Positives = 46/50 (92%), Gaps = 1/50 (2%)
Frame = -2
Query: 794 VSALVALCRARASSSSSSVFNSLVRPAFRSFSTGFGDVQNKTLVAEMEEK 645
+S LVALCRARA S+SSS+FNS++RPAFR+FSTGF D QNK+LVA+M+E+
Sbjct: 1 MSGLVALCRARA-SASSSLFNSVIRPAFRNFSTGFADTQNKSLVAQMKEE 49
>TAIR9_protein||AT2G44065.2 | Symbols: | ribosomal protein L2 family protein |
chr2:18228860-18230368 FORWARD
Length = 215
Score = 320 bits (819), Expect = 9e-088
Identities = 155/169 (91%), Positives = 160/169 (94%), Gaps = 1/169 (0%)
Frame = -3
Query: 652 KKKMLHMDINSMIGSSMPPGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKILKEPASGKC 473
K++MLHMDINSMIGSSMP GMMRIGTIIHNIEMNPGQGAK+VRAAGTNAKILKEPA GKC
Sbjct: 47 KEEMLHMDINSMIGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKC 106
Query: 472 LIKLPSGDTRWINARCRATIGTVSNPSHGVKKLYKAGQSRWLGIRPKVRGVAMNPCDHPH 293
LIKLPSGDT+WINA+CRATIGTVSNPSHG KKLYKAGQSRWLGIRPKVRGVAMNPCDHPH
Sbjct: 107 LIKLPSGDTKWINAKCRATIGTVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPH 166
Query: 292 GGGEGKSKSSGSRGRTSVSPWGKPCKGGYKFASV-KKKKRLAAREAKM* 149
GGGEGKSKSSGSRGRTSVSPWGKPCKGGYK ASV KKKKRLA AKM*
Sbjct: 167 GGGEGKSKSSGSRGRTSVSPWGKPCKGGYKSASVKKKKKRLAEAAAKM* 215
Score = 73 bits (178), Expect = 2e-013
Identities = 36/50 (72%), Positives = 46/50 (92%), Gaps = 1/50 (2%)
Frame = -2
Query: 794 VSALVALCRARASSSSSSVFNSLVRPAFRSFSTGFGDVQNKTLVAEMEEK 645
+S LVALCRARA S+SSS+FNS++RPAFR+FSTGF D QNK+LVA+M+E+
Sbjct: 1 MSGLVALCRARA-SASSSLFNSVIRPAFRNFSTGFADTQNKSLVAQMKEE 49
>TAIR9_protein||ATCG00830.1 | Symbols: RPL2.1 | encodes a chloroplast ribosomal
protein L2, a constituent of the large subunit of the ribosomal complex
| chrC:84337-85843 REVERSE
Length = 275
Score = 124 bits (309), Expect = 1e-028
Identities = 64/135 (47%), Positives = 83/135 (61%), Gaps = 4/135 (2%)
Frame = -3
Query: 616 IGSSMPPGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKILKEPASGKCLIKLPSGDTRWI 437
+G+++P M +GT IHNIE+ G+G +L RAAG AK++ + L KLPSG+ R I
Sbjct: 124 MGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLI 182
Query: 436 NARCRATIGTVSNPSHGVKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSKSSGS 257
+ C AT+G V N K L +AG WLG RP VRGV MNP DHPHGGGEG++
Sbjct: 183 SKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRK 242
Query: 256 RGRTSVSPWGKPCKG 212
+ V+PWG P G
Sbjct: 243 K---PVTPWGYPALG 254
>TAIR9_protein||ATCG01310.1 | Symbols: RPL2.2 | encodes a chloroplast ribosomal
protein L2, a constituent of the large subunit of the ribosomal complex
| chrC:152806-154312 FORWARD
Length = 275
Score = 124 bits (309), Expect = 1e-028
Identities = 64/135 (47%), Positives = 83/135 (61%), Gaps = 4/135 (2%)
Frame = -3
Query: 616 IGSSMPPGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKILKEPASGKCLIKLPSGDTRWI 437
+G+++P M +GT IHNIE+ G+G +L RAAG AK++ + L KLPSG+ R I
Sbjct: 124 MGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLI 182
Query: 436 NARCRATIGTVSNPSHGVKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSKSSGS 257
+ C AT+G V N K L +AG WLG RP VRGV MNP DHPHGGGEG++
Sbjct: 183 SKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRK 242
Query: 256 RGRTSVSPWGKPCKG 212
+ V+PWG P G
Sbjct: 243 K---PVTPWGYPALG 254
>TAIR9_protein||AT3G51190.1 | Symbols: | structural constituent of ribosome |
chr3:19016606-19017547 REVERSE
Length = 261
Score = 86 bits (210), Expect = 4e-017
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 6/140 (4%)
Frame = -3
Query: 625 NSMIGSSMPPGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKIL-KEPASGKCLIKLPSGD 449
N M+G+ +P G + G +I N+E++ G L RA+G A ++ P S +KLPSG
Sbjct: 96 NLMVGNVLPLGSIPEGAVICNVELHVGDRGALARASGDYAIVIAHNPESNTTRVKLPSGS 155
Query: 448 TRWINARCRATIGTVSNPSHGVKKLYKAGQS--RWLGIR---PKVRGVAMNPCDHPHGGG 284
+ + + CRA IG V+ K L KAG + ++ R P VRGVAMNP +HPHGGG
Sbjct: 156 KKILPSACRAMIGQVAGGGRTEKPLLKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGG 215
Query: 283 EGKSKSSGSRGRTSVSPWGK 224
+ S R S K
Sbjct: 216 NHQHIGHASTVRRDKSAGAK 235
>TAIR9_protein||AT2G18020.1 | Symbols: EMB2296 | EMB2296 (embryo defective
2296); structural constituent of ribosome | chr2:7837151-7838160
FORWARD
Length = 259
Score = 79 bits (194), Expect = 3e-015
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 14/142 (9%)
Frame = -3
Query: 619 MIGSSMPPGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKIL-KEPASGKCLIKLPSGDTR 443
++G+ +P + G ++ N+E + G L RA+G A ++ P S IKLPSG +
Sbjct: 97 VVGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKK 156
Query: 442 WINARCRATIGTVSNPSHGVKKLYKAG---------QSRWLGIRPKVRGVAMNPCDHPHG 290
+ + CRA IG V+ K + KAG ++ W PKVRGVAMNP +HPHG
Sbjct: 157 IVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNSW----PKVRGVAMNPVEHPHG 212
Query: 289 GGEGKSKSSGSRGRTSVSPWGK 224
GG + S R P K
Sbjct: 213 GGNHQHIGHASTVRRDAPPGQK 234
>TAIR9_protein||AT4G36130.1 | Symbols: | 60S ribosomal protein L8 (RPL8C) |
chr4:17097613-17098656 FORWARD
Length = 259
Score = 76 bits (186), Expect = 2e-014
Identities = 48/138 (34%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Frame = -3
Query: 619 MIGSSMPPGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKIL-KEPASGKCLIKLPSGDTR 443
++G+ +P + G +I N+E + G RA+G A ++ P + IKLPSG +
Sbjct: 97 VVGNVLPLRSIPEGAVICNVEHHVGDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKK 156
Query: 442 WINARCRATIGTVSNPSHGVKKLYKAGQSRW-----LGIRPKVRGVAMNPCDHPHGGGEG 278
+ + CRA IG V+ K + KAG + PKVRGVAMNP +HPHGGG
Sbjct: 157 IVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNH 216
Query: 277 KSKSSGSRGRTSVSPWGK 224
+ S R P K
Sbjct: 217 QHIGHASTVRRDAPPGKK 234
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,628,668,842
Number of Sequences: 33410
Number of Extensions: 22628668842
Number of Successful Extensions: 713028804
Number of sequences better than 0.0: 0
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