BLASTX 7.6.2
Query= UN47428 /QuerySize=953
(952 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G21390.1 | Symbols: emb2170 | emb2170 (embryo ... 208 4e-054
TAIR9_protein||AT1G76980.2 | Symbols: | FUNCTIONS IN: molecular... 174 7e-044
TAIR9_protein||AT1G76980.1 | Symbols: | FUNCTIONS IN: molecular... 158 8e-039
>TAIR9_protein||AT1G21390.1 | Symbols: emb2170 | emb2170 (embryo defective 2170)
| chr1:7489385-7490554 REVERSE
Length = 249
Score = 208 bits (529), Expect = 4e-054
Identities = 122/183 (66%), Positives = 140/183 (76%), Gaps = 22/183 (12%)
Frame = -2
Query: 771 SKAQAIARGQRELMEMVSKMPESCYELSLRDLVEARGNEENNDRKIFDELTQRT---GKV 601
SKAQAIARGQRELMEMVSKMPESCYELSL+DLVE + N+E N+RK+FDEL +R KV
Sbjct: 59 SKAQAIARGQRELMEMVSKMPESCYELSLKDLVEVKVNQE-NERKVFDELPKRANRQSKV 117
Query: 600 VRKTKSGKRADPS----VNNGGFLLKMMFPFSFGSKKDTAKKKKKKKKRKGKDSVKDSQV 433
VRKTKS KR DP+ NN GFLLK+MF S G+ KDT KKKKKKKK + +V
Sbjct: 118 VRKTKSDKRVDPNRSGGGNNSGFLLKIMFLVSLGAMKDTTKKKKKKKKDEA------CKV 171
Query: 432 SPRPSISDESVKTEDREWWNRLSESRGSESTKRSGSSNSN---RSLSSIRDKKSSCLLSF 262
SPRPSIS+E+VK ED+EWWNR+SES STKRSGSS+SN RS SS+RD+KSSC SF
Sbjct: 172 SPRPSISEETVKVEDKEWWNRMSES----STKRSGSSSSNNSIRSRSSLRDEKSSC-FSF 226
Query: 261 LWF 253
L F
Sbjct: 227 LTF 229
Score = 80 bits (197), Expect = 1e-015
Identities = 39/60 (65%), Positives = 47/60 (78%), Gaps = 4/60 (6%)
Frame = -3
Query: 932 MFDP-SAETYSHHLSFPTVPN-DHSDSGVCSPTLWSTSPPRG--PLHRPEHYSSLSPDRR 765
M DP SA++++ HL FP++PN DHSDSGVCSPTLW TSPP+ P HRPE Y SLSPD +
Sbjct: 1 MLDPSSAKSFNTHLCFPSIPNDDHSDSGVCSPTLWRTSPPKSPPPFHRPEDYWSLSPDSK 60
>TAIR9_protein||AT1G76980.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
emb2170 (embryo defective 2170) (TAIR:AT1G21390.1). |
chr1:28926086-28927242 REVERSE
Length = 251
Score = 174 bits (441), Expect = 7e-044
Identities = 109/200 (54%), Positives = 128/200 (64%), Gaps = 26/200 (13%)
Frame = -2
Query: 771 SKAQAIARGQRELMEMVSKMPESCYELSLRDLVEARGNEENNDRKIFDELTQR---TGKV 601
+KAQ IARGQRELM+MVSKMPESCYELSL+DLVE EE K+FDE+ QR KV
Sbjct: 57 TKAQVIARGQRELMDMVSKMPESCYELSLKDLVEVNTEEE----KVFDEMPQREKKPRKV 112
Query: 600 VRKTKSGKRADP----SVNNGGFLLKMMFPFSFGSKKDTAKKKKKKKKRKGKDSVKDSQV 433
VRKTKS K DP VNN GFLLK++FP S G+KK T KKK S +
Sbjct: 113 VRKTKSDKWVDPIRNGGVNNSGFLLKLVFPVSLGAKKKTNKKKDNDDDDSSVTSKRSWIS 172
Query: 432 SPRPSISDESVKTEDREWW-NRLSESRGSE---------STKRSGS----SNSNRSLSSI 295
SPRPSISD S+K ED++WW + LSESR S+ S+K SG SNS+RS +S+
Sbjct: 173 SPRPSISDLSMKREDKDWWKDGLSESRRSQSVVSRINSGSSKSSGGSSSRSNSDRSRNSL 232
Query: 294 RDKKSSCLLSFLWFVRSRD* 235
RD+ C LSFLW V RD*
Sbjct: 233 RDENRGC-LSFLWNVHPRD* 251
Score = 70 bits (171), Expect = 1e-012
Identities = 29/53 (54%), Positives = 39/53 (73%)
Frame = -3
Query: 932 MFDPSAETYSHHLSFPTVPNDHSDSGVCSPTLWSTSPPRGPLHRPEHYSSLSP 774
+FD S++++ HL+FP +DHSDSGVCSP LW TSPP+ P H +Y +LSP
Sbjct: 3 IFDLSSKSFDSHLNFPRTFDDHSDSGVCSPPLWRTSPPKSPAHLHNNYQNLSP 55
>TAIR9_protein||AT1G76980.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
emb2170 (embryo defective 2170) (TAIR:AT1G21390.1); Has 33 Blast hits
to 33 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 2;
Fungi - 7; Plants - 14; Viruses - 2; Other Eukaryotes - 4 (source: NCBI
BLink). | chr1:28926466-28927242 REVERSE
Length = 259
Score = 158 bits (397), Expect = 8e-039
Identities = 99/181 (54%), Positives = 117/181 (64%), Gaps = 25/181 (13%)
Frame = -2
Query: 771 SKAQAIARGQRELMEMVSKMPESCYELSLRDLVEARGNEENNDRKIFDELTQR---TGKV 601
+KAQ IARGQRELM+MVSKMPESCYELSL+DLVE EE K+FDE+ QR KV
Sbjct: 57 TKAQVIARGQRELMDMVSKMPESCYELSLKDLVEVNTEEE----KVFDEMPQREKKPRKV 112
Query: 600 VRKTKSGKRADP----SVNNGGFLLKMMFPFSFGSKKDTAKKKKKKKKRKGKDSVKDSQV 433
VRKTKS K DP VNN GFLLK++FP S G+KK T KKK S +
Sbjct: 113 VRKTKSDKWVDPIRNGGVNNSGFLLKLVFPVSLGAKKKTNKKKDNDDDDSSVTSKRSWIS 172
Query: 432 SPRPSISDESVKTEDREWW-NRLSESRGSE---------STKRSGS----SNSNRSLSSI 295
SPRPSISD S+K ED++WW + LSESR S+ S+K SG SNS+RS +S+
Sbjct: 173 SPRPSISDLSMKREDKDWWKDGLSESRRSQSVVSRINSGSSKSSGGSSSRSNSDRSRNSL 232
Query: 294 R 292
R
Sbjct: 233 R 233
Score = 70 bits (171), Expect = 1e-012
Identities = 29/53 (54%), Positives = 39/53 (73%)
Frame = -3
Query: 932 MFDPSAETYSHHLSFPTVPNDHSDSGVCSPTLWSTSPPRGPLHRPEHYSSLSP 774
+FD S++++ HL+FP +DHSDSGVCSP LW TSPP+ P H +Y +LSP
Sbjct: 3 IFDLSSKSFDSHLNFPRTFDDHSDSGVCSPPLWRTSPPKSPAHLHNNYQNLSP 55
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,628,668,842
Number of Sequences: 33410
Number of Extensions: 22628668842
Number of Successful Extensions: 713028804
Number of sequences better than 0.0: 0
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