BLASTX 7.6.2
Query= UN47440 /QuerySize=1030
(1029 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|7076789|emb|CAB75904.1| putative RNA binding protein [Arabido... 200 4e-049
gi|297816842|ref|XP_002876304.1| hypothetical protein ARALYDRAFT... 193 5e-047
gi|18410283|ref|NP_567021.1| SC35-like splicing factor 30 [Arabi... 185 1e-044
gi|9843657|emb|CAC03602.1| SC35-like splicing factor SCL30, 30 k... 181 2e-043
gi|255584869|ref|XP_002533150.1| serine/arginine rich splicing f... 155 1e-035
gi|296086246|emb|CBI31687.3| unnamed protein product [Vitis vini... 140 5e-031
gi|242072089|ref|XP_002451321.1| hypothetical protein SORBIDRAFT... 137 4e-030
gi|224098431|ref|XP_002311171.1| predicted protein [Populus tric... 132 1e-028
gi|225449547|ref|XP_002283722.1| PREDICTED: hypothetical protein... 129 9e-028
gi|194700364|gb|ACF84266.1| unknown [Zea mays] 128 2e-027
gi|194706612|gb|ACF87390.1| unknown [Zea mays] 128 2e-027
gi|195625068|gb|ACG34364.1| SR repressor protein [Zea mays] 126 8e-027
gi|253760757|ref|XP_002489004.1| hypothetical protein SORBIDRAFT... 120 4e-025
gi|218190416|gb|EEC72843.1| hypothetical protein OsI_06591 [Oryz... 109 7e-022
>gi|7076789|emb|CAB75904.1| putative RNA binding protein [Arabidopsis thaliana]
Length = 309
Score = 200 bits (507), Expect = 4e-049
Identities = 119/196 (60%), Positives = 126/196 (64%), Gaps = 12/196 (6%)
Frame = +1
Query: 280 ETITQGNLGEPQRSMNRRVFGGREITVVVASESRKRPEEMRVKTRTRSREPSGSRGRSHG 459
E + + GE QRSMNRR F GREITVVVASESRKRPEEMRVKTRTRSREPSGSR RSH
Sbjct: 94 EFVDAYDAGEAQRSMNRRSFAGREITVVVASESRKRPEEMRVKTRTRSREPSGSRDRSHA 153
Query: 460 R-----------SRSRSISRSRSPRRPSDSRSRRRSRSYSPAPRRRGADYSASPRRRQEE 606
+ + + S RSR RS S S +PRR S R
Sbjct: 154 KFTQILAQLDWDALVYTQLEKALVYTCSHGRSRSRSISRSRSPRRPSDSRSRYRSRSYSP 213
Query: 607 RPRSPLRSPPRGEGDAKYSRRSYSPGYEGAATAAEDRDTNGDNETREKLDYEPEERRRGG 786
PR PPRGE D YSRRSYSPGYEGAA AA DRD NGDNE REK YE E+RRRGG
Sbjct: 214 APRR-RGGPPRGEEDENYSRRSYSPGYEGAAAAAPDRDRNGDNEIREKPGYEAEDRRRGG 272
Query: 787 REVSRSPSGSRSRSVE 834
R VSRSPSGSRSRSVE
Sbjct: 273 RAVSRSPSGSRSRSVE 288
Score = 185 bits (468), Expect = 1e-044
Identities = 83/88 (94%), Positives = 86/88 (97%), Gaps = 1/88 (1%)
Frame = +3
Query: 48 RRYSPPYYSPPRRGYGGRGRS-PPPPPRRGYGGGGGGGGRKGSSHGSLLVRNIPLDCRPE 224
RRYSPPYYSPPRRGYGGRGRS PPPPPRRGYGGGGGGGGR+GSSHGSLLVRNIPLDCRPE
Sbjct: 2 RRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRPE 61
Query: 225 ELRVPFERFGPVKDVYIPRDYYSGEPRG 308
ELR PFERFGPV+DVYIPRDYYSG+PRG
Sbjct: 62 ELREPFERFGPVRDVYIPRDYYSGQPRG 89
>gi|297816842|ref|XP_002876304.1| hypothetical protein ARALYDRAFT_485973
[Arabidopsis lyrata subsp. lyrata]
Length = 260
Score = 193 bits (489), Expect = 5e-047
Identities = 85/87 (97%), Positives = 87/87 (100%)
Frame = +3
Query: 48 RRYSPPYYSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNIPLDCRPEE 227
RRYSPPYYSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGR+GSSHGSLLVRNIPLDCRPEE
Sbjct: 2 RRYSPPYYSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRPEE 61
Query: 228 LRVPFERFGPVKDVYIPRDYYSGEPRG 308
LRVPFERFGPV+DVYIPRDYYSGEPRG
Sbjct: 62 LRVPFERFGPVRDVYIPRDYYSGEPRG 88
Score = 171 bits (432), Expect = 2e-040
Identities = 100/155 (64%), Positives = 105/155 (67%), Gaps = 12/155 (7%)
Frame = +1
Query: 280 ETITQGNLGEPQRSMNRRVFGGREITVVVASESRKRPEEMRVKTRTRSREPSGSRGRSHG 459
E + + GE QRSMNRR+F GREITVVVASESRKRPEEMRVKTRTRSREPSGSRGRSHG
Sbjct: 93 EFVDAYDAGEAQRSMNRRIFAGREITVVVASESRKRPEEMRVKTRTRSREPSGSRGRSHG 152
Query: 460 RSRSRSISRSRSPRRPSDSRSRRRSRSYSPAPRRRGADYSASPRRRQEERPRSP-----L 624
RSRSRSISRSRSPRRPSDSRSR RSRSYSPAPRRRG + R SP
Sbjct: 153 RSRSRSISRSRSPRRPSDSRSRYRSRSYSPAPRRRGGPPRGEEDGKYSRRSYSPGYEGAT 212
Query: 625 RSPPRGEGDAKYSRRSYSPGYEGAATAAEDRDTNG 729
+P R R PGYE AEDR G
Sbjct: 213 AAPDRDRNGDNEIRE--KPGYE-----AEDRLRGG 240
>gi|18410283|ref|NP_567021.1| SC35-like splicing factor 30 [Arabidopsis
thaliana]
Length = 262
Score = 185 bits (468), Expect = 1e-044
Identities = 83/88 (94%), Positives = 86/88 (97%), Gaps = 1/88 (1%)
Frame = +3
Query: 48 RRYSPPYYSPPRRGYGGRGRS-PPPPPRRGYGGGGGGGGRKGSSHGSLLVRNIPLDCRPE 224
RRYSPPYYSPPRRGYGGRGRS PPPPPRRGYGGGGGGGGR+GSSHGSLLVRNIPLDCRPE
Sbjct: 2 RRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRPE 61
Query: 225 ELRVPFERFGPVKDVYIPRDYYSGEPRG 308
ELR PFERFGPV+DVYIPRDYYSG+PRG
Sbjct: 62 ELREPFERFGPVRDVYIPRDYYSGQPRG 89
Score = 167 bits (421), Expect = 4e-039
Identities = 99/156 (63%), Positives = 102/156 (65%), Gaps = 13/156 (8%)
Frame = +1
Query: 280 ETITQGNLGEPQRSMNRRVFGGREITVVVASESRKRPEEMRVKTRTRSREPSGSRGRSHG 459
E + + GE QRSMNRR F GREITVVVASESRKRPEEMRVKTRTRSREPSGSR RSHG
Sbjct: 94 EFVDAYDAGEAQRSMNRRSFAGREITVVVASESRKRPEEMRVKTRTRSREPSGSRDRSHG 153
Query: 460 RSRSRSISRSRSPRRPSDSRSRRRSRSYSPAPRRRGADYSASPRRRQEERPRSP------ 621
RSRSRSISRSRSPRRPSDSRSR RSRSYSPAPRRRG R SP
Sbjct: 154 RSRSRSISRSRSPRRPSDSRSRYRSRSYSPAPRRRGGPPRGEEDENYSRRSYSPGYEGAA 213
Query: 622 LRSPPRGEGDAKYSRRSYSPGYEGAATAAEDRDTNG 729
+P R R PGYE AEDR G
Sbjct: 214 AAAPDRDRNGDNEIRE--KPGYE-----AEDRRRGG 242
Score = 145 bits (364), Expect = 2e-032
Identities = 91/158 (57%), Positives = 98/158 (62%), Gaps = 19/158 (12%)
Frame = +1
Query: 394 EMRVKTRTRSRE-PSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYSP------A 552
E+ V + SR+ P R ++ RSR S SR RS R SRSR SRS SP
Sbjct: 117 EITVVVASESRKRPEEMRVKTRTRSREPSGSRDRSHGR---SRSRSISRSRSPRRPSDSR 173
Query: 553 PRRRGADYSASPRRRQEERPRSPLRSPPRGEGDAKYSRRSYSPGYEGAATAAEDRDTNGD 732
R R YS +PRRR PPRGE D YSRRSYSPGYEGAA AA DRD NGD
Sbjct: 174 SRYRSRSYSPAPRRR---------GGPPRGEEDENYSRRSYSPGYEGAAAAAPDRDRNGD 224
Query: 733 NETREKLDYEPEERRRGGREVSRSPSGSRSRSVEASPR 846
NE REK YE E+RRRGGR VSRSPSGSRSRSVE SPR
Sbjct: 225 NEIREKPGYEAEDRRRGGRAVSRSPSGSRSRSVEVSPR 262
>gi|9843657|emb|CAC03602.1| SC35-like splicing factor SCL30, 30 kD [Arabidopsis
thaliana]
Length = 262
Score = 181 bits (459), Expect = 2e-043
Identities = 82/88 (93%), Positives = 85/88 (96%), Gaps = 1/88 (1%)
Frame = +3
Query: 48 RRYSPPYYSPPRRGYGGRGRS-PPPPPRRGYGGGGGGGGRKGSSHGSLLVRNIPLDCRPE 224
RRYSPPYYSP RRGYGGRGRS PPPPPRRGYGGGGGGGGR+GSSHGSLLVRNIPLDCRPE
Sbjct: 2 RRYSPPYYSPXRRGYGGRGRSPPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRPE 61
Query: 225 ELRVPFERFGPVKDVYIPRDYYSGEPRG 308
ELR PFERFGPV+DVYIPRDYYSG+PRG
Sbjct: 62 ELREPFERFGPVRDVYIPRDYYSGQPRG 89
Score = 167 bits (421), Expect = 4e-039
Identities = 99/156 (63%), Positives = 102/156 (65%), Gaps = 13/156 (8%)
Frame = +1
Query: 280 ETITQGNLGEPQRSMNRRVFGGREITVVVASESRKRPEEMRVKTRTRSREPSGSRGRSHG 459
E + + GE QRSMNRR F GREITVVVASESRKRPEEMRVKTRTRSREPSGSR RSHG
Sbjct: 94 EFVDAYDAGEAQRSMNRRSFSGREITVVVASESRKRPEEMRVKTRTRSREPSGSRDRSHG 153
Query: 460 RSRSRSISRSRSPRRPSDSRSRRRSRSYSPAPRRRGADYSASPRRRQEERPRSP------ 621
RSRSRSISRSRSPRRPSDSRSR RSRSYSPAPRRRG R SP
Sbjct: 154 RSRSRSISRSRSPRRPSDSRSRYRSRSYSPAPRRRGGPPRGEEDENYSRRSYSPGYEGAA 213
Query: 622 LRSPPRGEGDAKYSRRSYSPGYEGAATAAEDRDTNG 729
+P R R PGYE AEDR G
Sbjct: 214 AAAPDRDRNGDNEIRE--KPGYE-----AEDRRRGG 242
Score = 145 bits (364), Expect = 2e-032
Identities = 91/158 (57%), Positives = 98/158 (62%), Gaps = 19/158 (12%)
Frame = +1
Query: 394 EMRVKTRTRSRE-PSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYSP------A 552
E+ V + SR+ P R ++ RSR S SR RS R SRSR SRS SP
Sbjct: 117 EITVVVASESRKRPEEMRVKTRTRSREPSGSRDRSHGR---SRSRSISRSRSPRRPSDSR 173
Query: 553 PRRRGADYSASPRRRQEERPRSPLRSPPRGEGDAKYSRRSYSPGYEGAATAAEDRDTNGD 732
R R YS +PRRR PPRGE D YSRRSYSPGYEGAA AA DRD NGD
Sbjct: 174 SRYRSRSYSPAPRRR---------GGPPRGEEDENYSRRSYSPGYEGAAAAAPDRDRNGD 224
Query: 733 NETREKLDYEPEERRRGGREVSRSPSGSRSRSVEASPR 846
NE REK YE E+RRRGGR VSRSPSGSRSRSVE SPR
Sbjct: 225 NEIREKPGYEAEDRRRGGRAVSRSPSGSRSRSVEVSPR 262
>gi|255584869|ref|XP_002533150.1| serine/arginine rich splicing factor, putative
[Ricinus communis]
Length = 265
Score = 155 bits (391), Expect = 1e-035
Identities = 71/85 (83%), Positives = 76/85 (89%), Gaps = 3/85 (3%)
Frame = +3
Query: 54 YSPPYYSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNIPLDCRPEELR 233
YSPPYYSPPRRGYGGRGRS PPRRG+GGGGG G RK +HGSLLVRNIPLDCRPEELR
Sbjct: 4 YSPPYYSPPRRGYGGRGRS---PPRRGHGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELR 60
Query: 234 VPFERFGPVKDVYIPRDYYSGEPRG 308
PFERFG V+DVYIP+DYY+GEPRG
Sbjct: 61 APFERFGVVRDVYIPKDYYTGEPRG 85
>gi|296086246|emb|CBI31687.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 140 bits (351), Expect = 5e-031
Identities = 67/87 (77%), Positives = 74/87 (85%), Gaps = 6/87 (6%)
Frame = +3
Query: 48 RRYSPPYYSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNIPLDCRPEE 227
RRYSPPYYS PRRGYGGR RS PPRRGY GG G RK +HGSLLVRNIPL+CRPE+
Sbjct: 79 RRYSPPYYSAPRRGYGGRERS---PPRRGY---GGYGRRKEQNHGSLLVRNIPLNCRPED 132
Query: 228 LRVPFERFGPVKDVYIPRDYYSGEPRG 308
LRVPFERFG V+DVY+P+DYY+GEPRG
Sbjct: 133 LRVPFERFGLVRDVYLPKDYYTGEPRG 159
>gi|242072089|ref|XP_002451321.1| hypothetical protein SORBIDRAFT_05g027700
[Sorghum bicolor]
Length = 270
Score = 137 bits (343), Expect = 4e-030
Identities = 67/84 (79%), Positives = 71/84 (84%), Gaps = 9/84 (10%)
Frame = +3
Query: 63 PYYSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHG--SLLVRNIPLDCRPEELRV 236
P YSPPRRGYGGRGRS PPPRRGYGGGGG G HG SLLVRNIPL CRPEELRV
Sbjct: 6 PAYSPPRRGYGGRGRS--PPPRRGYGGGGGRG-----DHGSVSLLVRNIPLRCRPEELRV 58
Query: 237 PFERFGPVKDVYIPRDYYSGEPRG 308
PFERFGPV+DVY+PRDY++GEPRG
Sbjct: 59 PFERFGPVRDVYLPRDYHTGEPRG 82
>gi|224098431|ref|XP_002311171.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 132 bits (330), Expect = 1e-028
Identities = 65/87 (74%), Positives = 71/87 (81%), Gaps = 4/87 (4%)
Frame = +3
Query: 51 RYSPPYYSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGR-KGSSHGSLLVRNIPLDCRPEE 227
RYSPP+YS PRRG+GGRGRS PPRRG GGGGG GR K GSLLVRNIP DCRPEE
Sbjct: 3 RYSPPHYSSPRRGHGGRGRS---PPRRGRGGGGGRYGRSKDQDSGSLLVRNIPRDCRPEE 59
Query: 228 LRVPFERFGPVKDVYIPRDYYSGEPRG 308
LR FERFG V+DVYIP+DY++GEPRG
Sbjct: 60 LRGMFERFGVVRDVYIPKDYHTGEPRG 86
>gi|225449547|ref|XP_002283722.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 276
Score = 129 bits (323), Expect = 9e-028
Identities = 62/82 (75%), Positives = 69/82 (84%), Gaps = 6/82 (7%)
Frame = +3
Query: 63 PYYSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNIPLDCRPEELRVPF 242
PYYS PRRGYGGR RS PPRRGY GG G RK +HGSLLVRNIPL+CRPE+LRVPF
Sbjct: 7 PYYSAPRRGYGGRERS---PPRRGY---GGYGRRKEQNHGSLLVRNIPLNCRPEDLRVPF 60
Query: 243 ERFGPVKDVYIPRDYYSGEPRG 308
ERFG V+DVY+P+DYY+GEPRG
Sbjct: 61 ERFGLVRDVYLPKDYYTGEPRG 82
>gi|194700364|gb|ACF84266.1| unknown [Zea mays]
Length = 267
Score = 128 bits (320), Expect = 2e-027
Identities = 62/80 (77%), Positives = 67/80 (83%), Gaps = 7/80 (8%)
Frame = +3
Query: 69 YSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNIPLDCRPEELRVPFER 248
YSPPRRG+GGRGRS PPPRRGYGGG G G SLLVRNIPL CRPEELRVPFER
Sbjct: 8 YSPPRRGHGGRGRS--PPPRRGYGGGRGDHGSV-----SLLVRNIPLRCRPEELRVPFER 60
Query: 249 FGPVKDVYIPRDYYSGEPRG 308
FGPV+DVY+PRDY++GEPRG
Sbjct: 61 FGPVRDVYLPRDYHTGEPRG 80
>gi|194706612|gb|ACF87390.1| unknown [Zea mays]
Length = 269
Score = 128 bits (320), Expect = 2e-027
Identities = 62/80 (77%), Positives = 67/80 (83%), Gaps = 7/80 (8%)
Frame = +3
Query: 69 YSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNIPLDCRPEELRVPFER 248
YSPPRRG+GGRGRS PPPRRGYGGG G G SLLVRNIPL CRPEELRVPFER
Sbjct: 8 YSPPRRGHGGRGRS--PPPRRGYGGGRGDHGSV-----SLLVRNIPLRCRPEELRVPFER 60
Query: 249 FGPVKDVYIPRDYYSGEPRG 308
FGPV+DVY+PRDY++GEPRG
Sbjct: 61 FGPVRDVYLPRDYHTGEPRG 80
>gi|195625068|gb|ACG34364.1| SR repressor protein [Zea mays]
Length = 269
Score = 126 bits (315), Expect = 8e-027
Identities = 61/80 (76%), Positives = 66/80 (82%), Gaps = 7/80 (8%)
Frame = +3
Query: 69 YSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNIPLDCRPEELRVPFER 248
YSPPRRG+GGRGRS PPPRRGYGGG G G SLLVRNIPL CRPEELRVPFER
Sbjct: 8 YSPPRRGHGGRGRS--PPPRRGYGGGRGDHGSV-----SLLVRNIPLRCRPEELRVPFER 60
Query: 249 FGPVKDVYIPRDYYSGEPRG 308
FGPV+D Y+PRDY++GEPRG
Sbjct: 61 FGPVRDFYLPRDYHTGEPRG 80
>gi|253760757|ref|XP_002489004.1| hypothetical protein SORBIDRAFT_0514s002010
[Sorghum bicolor]
Length = 208
Score = 120 bits (300), Expect = 4e-025
Identities = 60/82 (73%), Positives = 63/82 (76%), Gaps = 7/82 (8%)
Frame = +3
Query: 63 PYYSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNIPLDCRPEELRVPF 242
P + PRR YGGRGRS PPPPRRGY GGR GSLLVRNIPL R EELRVPF
Sbjct: 59 PVAANPRRAYGGRGRS-PPPPRRGY------GGRNKEGSGSLLVRNIPLSVRAEELRVPF 111
Query: 243 ERFGPVKDVYIPRDYYSGEPRG 308
ERFGPV+DVYIP+DYYSGEPRG
Sbjct: 112 ERFGPVRDVYIPKDYYSGEPRG 133
>gi|218190416|gb|EEC72843.1| hypothetical protein OsI_06591 [Oryza sativa Indica
Group]
Length = 289
Score = 109 bits (272), Expect = 7e-022
Identities = 55/86 (63%), Positives = 60/86 (69%), Gaps = 16/86 (18%)
Frame = +3
Query: 69 YSPPRRGYGGRGRSPPPPPRRGYGGGG------GGGGRKGSSHGSLLVRNIPLDCRPEEL 230
YSPP R PPRRGYGG G G GGRK GSLLVRNIPL CR E+L
Sbjct: 28 YSPPYRS----------PPRRGYGGRGRSPPRRGYGGRKEQGSGSLLVRNIPLSCRAEDL 77
Query: 231 RVPFERFGPVKDVYIPRDYYSGEPRG 308
RVPFERFGPV+DVY+P+DYY+GEPRG
Sbjct: 78 RVPFERFGPVRDVYLPKDYYTGEPRG 103
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,114,893,815,936
Number of Sequences: 15229318
Number of Extensions: 5114893815936
Number of Successful Extensions: 1178633539
Number of sequences better than 0.0: 0
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