BLASTX 7.6.2
Query= UN47467 /QuerySize=1736
(1735 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297818112|ref|XP_002876939.1| hypothetical protein ARALYDRAFT... 427 4e-117
gi|15230931|ref|NP_189221.1| 50S ribosomal protein L15 [Arabidop... 425 1e-116
gi|16497|emb|CAA77593.1| Plastid ribosomal protein CL15 [Arabido... 422 1e-115
gi|388448|emb|CAA77592.1| plastid ribosomal protein CL15 [Arabid... 416 8e-114
gi|225423989|ref|XP_002279311.1| PREDICTED: hypothetical protein... 357 4e-096
gi|255581635|ref|XP_002531621.1| 50S ribosomal protein L15, puta... 355 2e-095
gi|297737813|emb|CBI27014.3| unnamed protein product [Vitis vini... 355 2e-095
gi|224101737|ref|XP_002312401.1| predicted protein [Populus tric... 347 4e-093
gi|255627797|gb|ACU14243.1| unknown [Glycine max] 341 2e-091
gi|400986|sp|P31165.1|RK15_PEA RecName: Full=50S ribosomal prote... 332 2e-088
gi|189096136|pdb|3BBO|N Chain N, Homology Model For The Spinach ... 326 1e-086
gi|116790901|gb|ABK25784.1| unknown [Picea sitchensis] 314 5e-083
gi|226532984|ref|NP_001141277.1| hypothetical protein LOC1002733... 310 5e-082
gi|242041733|ref|XP_002468261.1| hypothetical protein SORBIDRAFT... 301 3e-079
gi|115451609|ref|NP_001049405.1| Os03g0219900 [Oryza sativa Japo... 300 6e-079
gi|326489899|dbj|BAJ94023.1| predicted protein [Hordeum vulgare ... 299 1e-078
gi|302794863|ref|XP_002979195.1| hypothetical protein SELMODRAFT... 262 1e-067
gi|168002184|ref|XP_001753794.1| predicted protein [Physcomitrel... 262 2e-067
gi|168001513|ref|XP_001753459.1| predicted protein [Physcomitrel... 259 1e-066
gi|302821306|ref|XP_002992316.1| hypothetical protein SELMODRAFT... 258 3e-066
>gi|297818112|ref|XP_002876939.1| hypothetical protein ARALYDRAFT_484358
[Arabidopsis lyrata subsp. lyrata]
Length = 275
Score = 427 bits (1096), Expect = 4e-117
Identities = 227/277 (81%), Positives = 241/277 (87%), Gaps = 12/277 (4%)
Frame = -3
Query: 1685 MAVPLSISTNLPISRQCPRPCFPSTSFKGNVSVLGANPRHILSLKLHHKRRT-------G 1527
MA PLSIS+N S +C R FPSTSFKGNVSVLGANP ILSLKL+ K +T
Sbjct: 1 MATPLSISSNPLTSHRCYRLHFPSTSFKGNVSVLGANPSQILSLKLNQKLKTRKQQQSAR 60
Query: 1526 PLVVFNQTSSSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQ 1347
PLVV +Q +++S +P ERFRLDNLGPQPGSRKR KRKGRGISAGQGASCGFGMRGQ
Sbjct: 61 PLVVVSQAAATSEVVAP---ERFRLDNLGPQPGSRKRQKRKGRGISAGQGASCGFGMRGQ 117
Query: 1346 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYVPVNLKDIETAGFEDGDEVS 1167
KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKY+PVNLKDIETAGF++GDEVS
Sbjct: 118 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNLKDIETAGFQEGDEVS 177
Query: 1166 LETLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPG 987
LETLK KGLINPSGRERKLPLKILGTGELS+KL FKARAFST AKEKLEASGCTLTVLPG
Sbjct: 178 LETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPG 237
Query: 986 RKKWVKPSVAKNLARADEYFAKKRADAAAAAASSEPA 876
RKKWVKPSVAKN ARADEYFAKKR AAAA A+SEPA
Sbjct: 238 RKKWVKPSVAKNQARADEYFAKKR--AAAAEATSEPA 272
>gi|15230931|ref|NP_189221.1| 50S ribosomal protein L15 [Arabidopsis thaliana]
Length = 277
Score = 425 bits (1092), Expect = 1e-116
Identities = 227/279 (81%), Positives = 242/279 (86%), Gaps = 10/279 (3%)
Frame = -3
Query: 1685 MAVPLSISTNLPISRQCPRPCFPSTSFKGNVSVLGANPRHILSLKLHHKRRT-------G 1527
MA PLSIS+N SR C R STSFKGNVSVLGANP ILSLKL+ +T
Sbjct: 1 MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60
Query: 1526 PLVVFNQTSSSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQ 1347
PLVV +QT +++SS+ A ERFRLDNLGPQPGSRK+ KRKGRGISAGQGASCGFGMRGQ
Sbjct: 61 PLVVVSQT--AATSSAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQ 118
Query: 1346 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYVPVNLKDIETAGFEDGDEVS 1167
KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKY+PVN+KDIETAGF++GDEVS
Sbjct: 119 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVS 178
Query: 1166 LETLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPG 987
LETLK KGLINPSGRERKLPLKILGTGELS+KL FKARAFST AKEKLEASGCTLTVLPG
Sbjct: 179 LETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPG 238
Query: 986 RKKWVKPSVAKNLARADEYFAKKRADAAAAAASSEPATS 870
RKKWVKPSVAKN ARADEYFAKKRA AAA AA+SEPA S
Sbjct: 239 RKKWVKPSVAKNQARADEYFAKKRA-AAAEAATSEPAAS 276
>gi|16497|emb|CAA77593.1| Plastid ribosomal protein CL15 [Arabidopsis thaliana]
Length = 277
Score = 422 bits (1084), Expect = 1e-115
Identities = 226/279 (81%), Positives = 241/279 (86%), Gaps = 10/279 (3%)
Frame = -3
Query: 1685 MAVPLSISTNLPISRQCPRPCFPSTSFKGNVSVLGANPRHILSLKLHHKRRT-------G 1527
MA PLSIS+N SR C R STSFKGNVSVLGANP ILSLKL+ +T
Sbjct: 1 MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60
Query: 1526 PLVVFNQTSSSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQ 1347
PLVV +QT +++SS+ A ERFRLDNLGPQPGSRK+ KRKGRGISAGQGASCGFGMRGQ
Sbjct: 61 PLVVVSQT--AATSSAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQ 118
Query: 1346 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYVPVNLKDIETAGFEDGDEVS 1167
KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKY+PVN+KDIETAGF++GDEVS
Sbjct: 119 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVS 178
Query: 1166 LETLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPG 987
LETLK KGLINPSGRERKLPLKILGTGELS+KL FKARAFST AKEKLEASGCTLTVLP
Sbjct: 179 LETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPE 238
Query: 986 RKKWVKPSVAKNLARADEYFAKKRADAAAAAASSEPATS 870
RKKWVKPSVAKN ARADEYFAKKRA AAA AA+SEPA S
Sbjct: 239 RKKWVKPSVAKNQARADEYFAKKRA-AAAEAATSEPAAS 276
>gi|388448|emb|CAA77592.1| plastid ribosomal protein CL15 [Arabidopsis
thaliana]
Length = 273
Score = 416 bits (1068), Expect = 8e-114
Identities = 223/275 (81%), Positives = 238/275 (86%), Gaps = 10/275 (3%)
Frame = -3
Query: 1673 LSISTNLPISRQCPRPCFPSTSFKGNVSVLGANPRHILSLKLHHKRRT-------GPLVV 1515
LSIS+N SR C R STSFKGNVSVLGANP ILSLKL+ +T PLVV
Sbjct: 1 LSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFARPLVV 60
Query: 1514 FNQTSSSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRS 1335
+QT +++SS+ A ERFRLDNLGPQPGSRK+ KRKGRGISAGQGASCGFGMRGQKSRS
Sbjct: 61 VSQT--AATSSAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQKSRS 118
Query: 1334 GPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYVPVNLKDIETAGFEDGDEVSLETL 1155
GPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKY+PVN+KDIETAGF++GDEVSLETL
Sbjct: 119 GPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVSLETL 178
Query: 1154 KLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKW 975
K KGLINPSGRERKLPLKILGTGELS+KL FKARAFST AKEKLEASGCTLTVLP RKKW
Sbjct: 179 KQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPERKKW 238
Query: 974 VKPSVAKNLARADEYFAKKRADAAAAAASSEPATS 870
VKPSVAKN ARADEYFAKKRA AAA AA+SEPA S
Sbjct: 239 VKPSVAKNQARADEYFAKKRA-AAAEAATSEPAAS 272
>gi|225423989|ref|XP_002279311.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 299
Score = 357 bits (915), Expect = 4e-096
Identities = 189/268 (70%), Positives = 219/268 (81%), Gaps = 9/268 (3%)
Frame = -3
Query: 1685 MAVPLSISTNLPISRQCPRPCFPSTSFKGNVSVLGANPRHILSLKLHHK---RRTGPLVV 1515
MA LS+S + P SR PS+ FKGNV L ANP L++KL K R++G +V
Sbjct: 38 MAALLSVS-SAPSSRTPLFLHHPSSPFKGNVRNLKANPCQFLTIKLEVKEKVRKSGVVV- 95
Query: 1514 FNQTSSSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRS 1335
+S S SS + RFRLDNLGPQPGSRK+AKRKGRGISAGQG SCGFGMRGQKSRS
Sbjct: 96 ----ASQGSPSSVVDNVRFRLDNLGPQPGSRKKAKRKGRGISAGQGNSCGFGMRGQKSRS 151
Query: 1334 GPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYVPVNLKDIETAGFEDGDEVSLETL 1155
GPG+M+GFEGGQ LYRR+PKLRGIAGGM +GLPKYVPVNLKDIE AGF++G+EVSL++L
Sbjct: 152 GPGVMKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLDSL 211
Query: 1154 KLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKW 975
K KGLINPSGRER+LPLKILG G+LSVKLN KARAFS+SAKEKLEA+GC++TVLPGRKKW
Sbjct: 212 KKKGLINPSGRERRLPLKILGAGDLSVKLNIKARAFSSSAKEKLEAAGCSITVLPGRKKW 271
Query: 974 VKPSVAKNLARADEYFAKKRADAAAAAA 891
+KPSV KNLARA+EYFAKKRA A A++
Sbjct: 272 LKPSVIKNLARAEEYFAKKRAAAEQASS 299
>gi|255581635|ref|XP_002531621.1| 50S ribosomal protein L15, putative [Ricinus
communis]
Length = 263
Score = 355 bits (910), Expect = 2e-095
Identities = 184/256 (71%), Positives = 215/256 (83%), Gaps = 6/256 (2%)
Frame = -3
Query: 1634 PRPCFPSTSFKGNVSVLGANPRHILSLKLHHKRRTG--PLVVFNQTSSSSSSSSPAASE- 1464
P +PS+ FKGN++ L ++ L ++ + G LVV NQ S+++++ +AS
Sbjct: 7 PHLHYPSSHFKGNLTSLRLKTCTLIPLNFNNAKPKGTQQLVVINQARSTAAAAIQSASSG 66
Query: 1463 -RFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALY 1287
RFRLDNLGPQ GSRKR KRKGRGI+AGQG SCGFGMRGQKSRSGPG+ +GFEGGQ LY
Sbjct: 67 VRFRLDNLGPQRGSRKRGKRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLY 126
Query: 1286 RRLPKLRGIAGGMRSGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLP 1107
RR+PKLRGIAGGM +GLPK+VPVNLKDIE AGF++G+EVSLETLK KGLINPSGRER+LP
Sbjct: 127 RRIPKLRGIAGGMHAGLPKFVPVNLKDIEAAGFQEGEEVSLETLKEKGLINPSGRERRLP 186
Query: 1106 LKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYF 927
LKILG GELSVK+N KARAFSTSAKEKLEA+GC+LTVLPGRKKWVKPSVAKNLARA+EYF
Sbjct: 187 LKILGDGELSVKVNIKARAFSTSAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYF 246
Query: 926 AKKRADAAAAAASSEP 879
AKK+ AAAAAA+SEP
Sbjct: 247 AKKK--AAAAAAASEP 260
>gi|297737813|emb|CBI27014.3| unnamed protein product [Vitis vinifera]
Length = 262
Score = 355 bits (909), Expect = 2e-095
Identities = 181/246 (73%), Positives = 209/246 (84%), Gaps = 8/246 (3%)
Frame = -3
Query: 1619 PSTSFKGNVSVLGANPRHILSLKLHHK---RRTGPLVVFNQTSSSSSSSSPAASERFRLD 1449
PS+ FKGNV L ANP L++KL K R++G +V +S S SS + RFRLD
Sbjct: 22 PSSPFKGNVRNLKANPCQFLTIKLEVKEKVRKSGVVV-----ASQGSPSSVVDNVRFRLD 76
Query: 1448 NLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKL 1269
NLGPQPGSRK+AKRKGRGISAGQG SCGFGMRGQKSRSGPG+M+GFEGGQ LYRR+PKL
Sbjct: 77 NLGPQPGSRKKAKRKGRGISAGQGNSCGFGMRGQKSRSGPGVMKGFEGGQMPLYRRIPKL 136
Query: 1268 RGIAGGMRSGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILGT 1089
RGIAGGM +GLPKYVPVNLKDIE AGF++G+EVSL++LK KGLINPSGRER+LPLKILG
Sbjct: 137 RGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLDSLKKKGLINPSGRERRLPLKILGA 196
Query: 1088 GELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRAD 909
G+LSVKLN KARAFS+SAKEKLEA+GC++TVLPGRKKW+KPSV KNLARA+EYFAKKRA
Sbjct: 197 GDLSVKLNIKARAFSSSAKEKLEAAGCSITVLPGRKKWLKPSVIKNLARAEEYFAKKRAA 256
Query: 908 AAAAAA 891
A A++
Sbjct: 257 AEQASS 262
>gi|224101737|ref|XP_002312401.1| predicted protein [Populus trichocarpa]
Length = 256
Score = 347 bits (889), Expect = 4e-093
Identities = 179/248 (72%), Positives = 205/248 (82%), Gaps = 3/248 (1%)
Frame = -3
Query: 1628 PCFPSTSFKGNVSVLGANPRHILSLKLHHKRRTGPLVVFNQTSSSSSSSSPAASERFRLD 1449
PC PS+ FKGN++ L + L LH K + P VV NQ ++ S ++ ++ R RLD
Sbjct: 11 PC-PSSPFKGNLTRLKPKTCNFTCLTLHSKNKR-PSVVVNQAAAPSVVTT-SSGARLRLD 67
Query: 1448 NLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKL 1269
NLGPQPGSRK+ KRKGRGISAGQG SCGFGMRGQKSRSGPG+ +GFEGGQ LYRR+PKL
Sbjct: 68 NLGPQPGSRKKGKRKGRGISAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKL 127
Query: 1268 RGIAGGMRSGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILGT 1089
RGIAGGM +GLPKYVPVNLKDI +AGF++G EVSLETLK KGLINPSGRER+LPLK+LG
Sbjct: 128 RGIAGGMHAGLPKYVPVNLKDIASAGFQEGAEVSLETLKEKGLINPSGRERRLPLKVLGD 187
Query: 1088 GELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRAD 909
GELSVKLN KARAFS +AKEKLEA+GC+LTVLPGRKKWVKPSVAKNLARA+EYFAKKRA
Sbjct: 188 GELSVKLNIKARAFSAAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKKRAA 247
Query: 908 AAAAAASS 885
A + SS
Sbjct: 248 AIVSEPSS 255
>gi|255627797|gb|ACU14243.1| unknown [Glycine max]
Length = 256
Score = 341 bits (874), Expect = 2e-091
Identities = 180/248 (72%), Positives = 200/248 (80%), Gaps = 4/248 (1%)
Frame = -3
Query: 1628 PCFPSTSFKGNVSVLGANPRHILSLKLHHKRRTGPLVVFNQTSSSSSSSSPAASERFRLD 1449
P P + FKG V L A P LK + R VV S SS ++P+ RFRLD
Sbjct: 13 PWRPLSPFKGTVKTLVAKP----WLKKIQQARPLISVVNKAASLSSPVTAPSVGVRFRLD 68
Query: 1448 NLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKL 1269
NLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPG+ +GFEGGQ LYRR+PKL
Sbjct: 69 NLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKL 128
Query: 1268 RGIAGGMRSGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILGT 1089
RGIAGGM +GLPKYV VNL+DIE A F++G+EVSLE+LK KG+INPSGRER+LPLKILG
Sbjct: 129 RGIAGGMHAGLPKYVHVNLRDIEDAKFKEGEEVSLESLKAKGVINPSGRERRLPLKILGE 188
Query: 1088 GELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRAD 909
GELS KL KARAFSTSAKEKLE +GC+LTVLPGRKKWVKPSVAKNLARADEYFAKKRA
Sbjct: 189 GELSKKLTLKARAFSTSAKEKLENAGCSLTVLPGRKKWVKPSVAKNLARADEYFAKKRAM 248
Query: 908 AAAAAASS 885
AA+ AS+
Sbjct: 249 AASEPASA 256
>gi|400986|sp|P31165.1|RK15_PEA RecName: Full=50S ribosomal protein L15,
chloroplastic; AltName: Full=CL15; Flags: Precursor
Length = 258
Score = 332 bits (849), Expect = 2e-088
Identities = 174/240 (72%), Positives = 193/240 (80%), Gaps = 2/240 (0%)
Frame = -3
Query: 1616 STSFKGNVSVLGANPRHILSLKLHHKRRTGPLVVFNQTSSSSSSSSPAASERFRLDNLGP 1437
++ FKGNV L A P LK+ +R + V N+ +S+ + S + RFRLDNLGP
Sbjct: 16 ASPFKGNVKTLVAKPCLCPCLKI--QRTKLRVSVVNKAASAYNVKSSGENVRFRLDNLGP 73
Query: 1436 QPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIA 1257
QPGSRKR KRKGRGI+AGQGASCGFGMRGQKSRSGPGIMRGFEGGQ LYRRLPKLRGIA
Sbjct: 74 QPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLRGIA 133
Query: 1256 GGMRSGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILGTGELS 1077
GGM +GLPKYV VNL DIE AGF+DG+EVSLETLK K +INPSGRERKLPLKIL GELS
Sbjct: 134 GGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINPSGRERKLPLKILADGELS 193
Query: 1076 VKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRADAAAA 897
KL KA AFSTSAKEKLE +GC+L VLPGRKKWVKPSVAKNLARA+EYFAKKR A+
Sbjct: 194 KKLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVAKNLARAEEYFAKKRGGETAS 253
>gi|189096136|pdb|3BBO|N Chain N, Homology Model For The Spinach Chloroplast 50s
Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
Length = 257
Score = 326 bits (834), Expect = 1e-086
Identities = 172/240 (71%), Positives = 190/240 (79%), Gaps = 3/240 (1%)
Frame = -3
Query: 1616 STSFKGNVSVLGANPRHILSLKLHHKRRTGPLVVFNQTSSSSSSSSPAASERFRLDNLGP 1437
++ FKGNV L A P LK+ +RT V ++S+ + + FRLDNLGP
Sbjct: 16 ASPFKGNVKTLVAKPCLCPCLKI---QRTKLRVSVVNKAASAYNVKSSGENVFRLDNLGP 72
Query: 1436 QPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIA 1257
QPGSRKR KRKGRGI+AGQGASCGFGMRGQKSRSGPGIMRGFEGGQ LYRRLPKLRGIA
Sbjct: 73 QPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLRGIA 132
Query: 1256 GGMRSGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILGTGELS 1077
GGM +GLPKYV VNL DIE AGF+DG+EVSLETLK K +INPSGRERKLPLKIL GELS
Sbjct: 133 GGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINPSGRERKLPLKILADGELS 192
Query: 1076 VKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRADAAAA 897
KL KA AFSTSAKEKLE +GC+L VLPGRKKWVKPSVAKNLARA+EYFAKKR A+
Sbjct: 193 KKLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVAKNLARAEEYFAKKRGGETAS 252
>gi|116790901|gb|ABK25784.1| unknown [Picea sitchensis]
Length = 263
Score = 314 bits (802), Expect = 5e-083
Identities = 163/248 (65%), Positives = 194/248 (78%), Gaps = 10/248 (4%)
Frame = -3
Query: 1628 PCFPSTSFKGNV------SVLGANPRHILSLKLHHKRRTGPLVVFNQTSSSSSSSSPAAS 1467
PC +FKGN S+ + PR + R+ + V Q ++ + +S ++
Sbjct: 19 PC----AFKGNAGNVRRGSLFASFPRLQVPHTKLGLRKHIQIGVICQAGATVTETSSSSI 74
Query: 1466 ERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALY 1287
RFRLDNLGPQ GSRKR KRKGRG +AGQG SCGFGMRGQKSRSGPG+ GFEGGQ LY
Sbjct: 75 GRFRLDNLGPQRGSRKRNKRKGRGHAAGQGGSCGFGMRGQKSRSGPGVRHGFEGGQMPLY 134
Query: 1286 RRLPKLRGIAGGMRSGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLP 1107
RR+PKLRGI+GGM +GLPKYVPVNL+DIE AGF+DG+EVSLE+LK KGLINPSGRER+LP
Sbjct: 135 RRIPKLRGISGGMGAGLPKYVPVNLEDIEAAGFKDGEEVSLESLKSKGLINPSGRERRLP 194
Query: 1106 LKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYF 927
LKILG GEL+ KL KARAFS+SAK+KLE++GCTL LPGRKKWVKPSV K+LARADEYF
Sbjct: 195 LKILGDGELTKKLTIKARAFSSSAKQKLESNGCTLITLPGRKKWVKPSVVKHLARADEYF 254
Query: 926 AKKRADAA 903
A+KRA+A+
Sbjct: 255 ARKRAEAS 262
>gi|226532984|ref|NP_001141277.1| hypothetical protein LOC100273366 [Zea mays]
Length = 267
Score = 310 bits (794), Expect = 5e-082
Identities = 163/250 (65%), Positives = 193/250 (77%), Gaps = 4/250 (1%)
Frame = -3
Query: 1628 PCFPSTSFKGNVSVLG--ANPRHILSLKLHHKRRTGPLVVFNQTSSSSSSSSPAASERFR 1455
P F S+S G + G A PR + L +R T +V + +++ +S + A E+FR
Sbjct: 19 PAFTSSSVVGPGILAGRWAAPRALPLRALPPRRVT--VVCSSAAAAAEASDAAAPVEKFR 76
Query: 1454 LDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLP 1275
LDNLGPQ GSR+R KRKGRGI+AGQGASCGFGMRGQKSRSGPG+ RGFEGGQ LYRRLP
Sbjct: 77 LDNLGPQKGSRRRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRRGFEGGQMPLYRRLP 136
Query: 1274 KLRGIAGGMRSGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKIL 1095
KLRGIAGGM GLPKYVP NLKDI GF+DGDE+SLE+LK +GLINPSGRERKLPLKIL
Sbjct: 137 KLRGIAGGMHIGLPKYVPFNLKDIVRGGFKDGDEISLESLKSRGLINPSGRERKLPLKIL 196
Query: 1094 GTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKR 915
G G++SVKLN KA AFS SAKEKLEA+GC+LT+LP RKKW+ + KN ARA+EYFAKK+
Sbjct: 197 GDGDVSVKLNIKAGAFSASAKEKLEAAGCSLTLLPKRKKWLPQNYLKNQARAEEYFAKKK 256
Query: 914 ADAAAAAASS 885
A A + + S
Sbjct: 257 AGAGESDSGS 266
>gi|242041733|ref|XP_002468261.1| hypothetical protein SORBIDRAFT_01g042610
[Sorghum bicolor]
Length = 269
Score = 301 bits (770), Expect = 3e-079
Identities = 148/199 (74%), Positives = 169/199 (84%)
Frame = -3
Query: 1502 SSSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGI 1323
+++ +S + A E+FRLDNLGPQ GSR+R KRKGRGI+AGQGASCGFGMRGQKSRSGPG+
Sbjct: 63 AAAEASDAAAPVEKFRLDNLGPQKGSRRRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGV 122
Query: 1322 MRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKG 1143
RGFEGGQ LYRRLPKLRGIAGGM GLPKYV NLKDI GF+DGDE+SLETLK +G
Sbjct: 123 RRGFEGGQMPLYRRLPKLRGIAGGMHIGLPKYVAFNLKDIVRGGFKDGDEISLETLKSRG 182
Query: 1142 LINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPS 963
LINPSGRERKLPLKILG G++SVKLN KA AFS SAKEKLEA+GC+LT+LP RKKW+ +
Sbjct: 183 LINPSGRERKLPLKILGDGDVSVKLNIKAGAFSASAKEKLEAAGCSLTLLPKRKKWLSQN 242
Query: 962 VAKNLARADEYFAKKRADA 906
KN ARA+EYFAKK+ A
Sbjct: 243 YLKNQARAEEYFAKKKGGA 261
>gi|115451609|ref|NP_001049405.1| Os03g0219900 [Oryza sativa Japonica Group]
Length = 263
Score = 300 bits (767), Expect = 6e-079
Identities = 150/225 (66%), Positives = 180/225 (80%), Gaps = 2/225 (0%)
Frame = -3
Query: 1559 SLKLHHKRRTGPLVVFNQTSSSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQ 1380
S+ L + R VV + ++ ++ + PA E+FRLDNLGPQ GSR+R KRKGRGI+AGQ
Sbjct: 40 SVVLRARPRRCVTVVCSAAAAEAAEAEPA--EKFRLDNLGPQKGSRRRPKRKGRGIAAGQ 97
Query: 1379 GASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYVPVNLKDIE 1200
GASCGFGMRGQKSRSGPG+ RGFEGGQ LYRR+PKLRGIAGGM GLPKYVP NL+D+
Sbjct: 98 GASCGFGMRGQKSRSGPGVRRGFEGGQMPLYRRIPKLRGIAGGMHIGLPKYVPFNLRDLA 157
Query: 1199 TAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLE 1020
GF+DGDE+SLE+LK +GLINPSGRERKLPLKILG G++SVKLN KA AFS SAKEKLE
Sbjct: 158 RGGFKDGDEISLESLKSRGLINPSGRERKLPLKILGDGDVSVKLNIKAGAFSASAKEKLE 217
Query: 1019 ASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRADAAAAAASS 885
A+GCTL+++P RKKW+ S KN ARA+EYF+KK A + +S
Sbjct: 218 AAGCTLSLVPKRKKWLPQSYLKNQARAEEYFSKKNGGAGESDEAS 262
>gi|326489899|dbj|BAJ94023.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 261
Score = 299 bits (764), Expect = 1e-078
Identities = 146/198 (73%), Positives = 168/198 (84%)
Frame = -3
Query: 1499 SSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIM 1320
S++ +S E+FRLDNL PQ G+R++ KRKGRGISAGQGASCGFGMRGQKSRSGPG+
Sbjct: 56 SAAETSEAEPVEKFRLDNLSPQKGARRKPKRKGRGISAGQGASCGFGMRGQKSRSGPGVR 115
Query: 1319 RGFEGGQTALYRRLPKLRGIAGGMRSGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGL 1140
RGFEGGQ LYRRLPKLRGIAGGM GLPKYVP NL+DI GF+DGDE+SLE+LK +GL
Sbjct: 116 RGFEGGQMPLYRRLPKLRGIAGGMHIGLPKYVPFNLRDIVQGGFKDGDEISLESLKSRGL 175
Query: 1139 INPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSV 960
INPSGRERKLPLKILG G+LSVKLN KA AFS++AKEKLEA+GCTLTVLP RKKW+ +
Sbjct: 176 INPSGRERKLPLKILGDGDLSVKLNIKAGAFSSAAKEKLEAAGCTLTVLPKRKKWLPAAY 235
Query: 959 AKNLARADEYFAKKRADA 906
KN ARA+EYF+KK+ A
Sbjct: 236 VKNQARAEEYFSKKKGGA 253
>gi|302794863|ref|XP_002979195.1| hypothetical protein SELMODRAFT_177574
[Selaginella moellendorffii]
Length = 258
Score = 262 bits (669), Expect = 1e-067
Identities = 134/193 (69%), Positives = 156/193 (80%), Gaps = 6/193 (3%)
Frame = -3
Query: 1478 PAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQ 1299
PA +RFRL NL PQPGSR + KRKGRG SAGQG SCGFGMRGQKSR+GP + GFEGGQ
Sbjct: 60 PAVLDRFRLHNLAPQPGSRHKNKRKGRGHSAGQGGSCGFGMRGQKSRAGPKVRPGFEGGQ 119
Query: 1298 TALYRRLPKLRGIAGGMRSGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRE 1119
LYRRLPKL+GIAGGMR+G+PKYV VN++DI T F DG+EVSLETL K +INPSG+E
Sbjct: 120 MPLYRRLPKLKGIAGGMRAGVPKYVAVNIRDIAT-HFNDGEEVSLETLTSKRIINPSGKE 178
Query: 1118 RKLPLKILG-TGELS----VKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAK 954
+KLPLK+LG G+L KL+ KAR+FS SAK KLEA+GCTL LPGRKKWV SV+K
Sbjct: 179 KKLPLKVLGDLGDLQDSSIKKLSIKARSFSASAKVKLEAAGCTLITLPGRKKWVSASVSK 238
Query: 953 NLARADEYFAKKR 915
N+ RA+EYFAKK+
Sbjct: 239 NIKRAEEYFAKKK 251
>gi|168002184|ref|XP_001753794.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 187
Score = 262 bits (667), Expect = 2e-067
Identities = 130/188 (69%), Positives = 151/188 (80%), Gaps = 1/188 (0%)
Frame = -3
Query: 1466 ERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALY 1287
+RFRL+NL PQPGSR R KRKGRGI+AGQGASCGFGMRGQKSRSG G+ GFEGGQ LY
Sbjct: 1 QRFRLNNLSPQPGSRHRQKRKGRGIAAGQGASCGFGMRGQKSRSGSGVRPGFEGGQMPLY 60
Query: 1286 RRLPKLRGIAGGMRSGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLP 1107
RRLPKLRGIAGGM +GLPKYV VNL DI A FE+G+EVSLE LK + ++NPSGR+RKLP
Sbjct: 61 RRLPKLRGIAGGMGAGLPKYVAVNLTDI-AASFEEGEEVSLEALKERRVLNPSGRDRKLP 119
Query: 1106 LKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYF 927
LKILG GEL K+ KA A S++A+EKLE+ GC +LP +KKW+ KN +RAD YF
Sbjct: 120 LKILGDGELDFKVKVKAGAISSAAREKLESLGCEFEILPKKKKWLSAQYLKNQSRADSYF 179
Query: 926 AKKRADAA 903
AKKR D+A
Sbjct: 180 AKKRGDSA 187
>gi|168001513|ref|XP_001753459.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 237
Score = 259 bits (661), Expect = 1e-066
Identities = 129/188 (68%), Positives = 149/188 (79%), Gaps = 1/188 (0%)
Frame = -3
Query: 1466 ERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALY 1287
+RFRL+NL PQPGSR R KRKGRGI+AGQGASCGFGMRGQKSRSG G+ GFEGGQ LY
Sbjct: 51 QRFRLNNLSPQPGSRHRQKRKGRGIAAGQGASCGFGMRGQKSRSGSGVRPGFEGGQMPLY 110
Query: 1286 RRLPKLRGIAGGMRSGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLP 1107
RRLPKLRGIAGGM +GLPKYV VNL DI A F++G+EVSLE LK + ++NPSGR+ KLP
Sbjct: 111 RRLPKLRGIAGGMGAGLPKYVAVNLTDI-AASFQEGEEVSLEALKERRVLNPSGRDSKLP 169
Query: 1106 LKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYF 927
LK+LG GEL ++ KA A S +AKEKLE GC +LP +KKWV +KN ARAD YF
Sbjct: 170 LKVLGDGELDFRVKIKAGAISAAAKEKLEKLGCECEILPKKKKWVSAQYSKNQARADAYF 229
Query: 926 AKKRADAA 903
AKKR D+A
Sbjct: 230 AKKRGDSA 237
>gi|302821306|ref|XP_002992316.1| hypothetical protein SELMODRAFT_135109
[Selaginella moellendorffii]
Length = 194
Score = 258 bits (658), Expect = 3e-066
Identities = 132/188 (70%), Positives = 153/188 (81%), Gaps = 6/188 (3%)
Frame = -3
Query: 1463 RFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYR 1284
RFRL NL PQPGSR + KRKGRG SAGQG SCGFGMRGQKSR+GP + GFEGGQ LYR
Sbjct: 1 RFRLHNLAPQPGSRHKNKRKGRGHSAGQGGSCGFGMRGQKSRAGPKVRPGFEGGQMPLYR 60
Query: 1283 RLPKLRGIAGGMRSGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPL 1104
RLPKL+GIAGGMR+G+PKYV VN++DI T F DG+EVSLETL K +INPSG+E+KLPL
Sbjct: 61 RLPKLKGIAGGMRAGVPKYVAVNIRDIAT-HFNDGEEVSLETLTSKRIINPSGKEKKLPL 119
Query: 1103 KILG-TGELS----VKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARA 939
K+LG G+L KL+ KAR+FS SAK KLEA+GCTL LPGRKKWV SV+KN+ RA
Sbjct: 120 KVLGDLGDLQDSSIKKLSIKARSFSASAKVKLEAAGCTLITLPGRKKWVSASVSKNIKRA 179
Query: 938 DEYFAKKR 915
+EYFAKK+
Sbjct: 180 EEYFAKKK 187
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,114,893,815,936
Number of Sequences: 15229318
Number of Extensions: 5114893815936
Number of Successful Extensions: 1178633539
Number of sequences better than 0.0: 0
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