BLASTX 7.6.2
Query= UN47473 /QuerySize=1252
(1251 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G26480.1 | Symbols: | KH domain-containing pr... 319 2e-087
TAIR9_protein||AT5G56140.1 | Symbols: | KH domain-containing pr... 310 2e-084
TAIR9_protein||AT3G08620.1 | Symbols: | KH domain-containing pr... 223 2e-058
TAIR9_protein||AT2G38610.1 | Symbols: | KH domain-containing pr... 219 4e-057
TAIR9_protein||AT2G38610.2 | Symbols: | KH domain-containing pr... 219 4e-057
TAIR9_protein||AT1G09660.1 | Symbols: | KH domain-containing qu... 205 7e-053
TAIR9_protein||AT1G09660.2 | Symbols: | KH domain-containing qu... 161 8e-040
TAIR9_protein||AT5G51300.1 | Symbols: | splicing factor-related... 96 4e-020
TAIR9_protein||AT5G51300.2 | Symbols: | splicing factor-related... 96 4e-020
TAIR9_protein||AT5G51300.3 | Symbols: | splicing factor-related... 96 4e-020
>TAIR9_protein||AT4G26480.1 | Symbols: | KH domain-containing protein |
chr4:13372885-13378390 REVERSE
Length = 556
Score = 319 bits (817), Expect = 2e-087
Identities = 162/176 (92%), Positives = 171/176 (97%), Gaps = 3/176 (1%)
Frame = -3
Query: 874 TKRSLSSSPAPNWLNSPGSSSGLIVKRSIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEA 695
++RS+SSSPAPNWLNSPGSSSGLIVKR+IRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEA
Sbjct: 381 SERSVSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEA 440
Query: 694 SSECRVLIRGRGSIKDPVKEEMMRGKPGYEHLNEQLHILVEAELPIEIVDARLMQAREIL 515
S++CRVLIRGRGSIKDP+KE+MMRGKPGYEHLNE LHILVEAELPIEIVDARLMQAREIL
Sbjct: 441 STDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREIL 500
Query: 514 ADLLTPVEETHDFYKKQQLRELALLNGSLREEGSPSPMSGSVSPYNNSLGMKRAKT 347
DLLTPVEETHDFYKKQQLRELALLNGSLREEG SPMSGS+SPY NSLGMKRAKT
Sbjct: 501 DDLLTPVEETHDFYKKQQLRELALLNGSLREEG--SPMSGSISPY-NSLGMKRAKT 553
Score = 155 bits (391), Expect = 6e-038
Identities = 82/102 (80%), Positives = 86/102 (84%), Gaps = 10/102 (9%)
Frame = -2
Query: 1139 QAAEE*EDV--LMMMMTSL--------GMDGGGGGRFMTYPPPLSVPPSAPQSPNFSGGL 990
Q AEE E+V +MMMMTSL G G GGGRF+TYPPPLSVPPSAPQSPNFSGGL
Sbjct: 236 QVAEEEEEVVAVMMMMTSLGGGAGGGGGGGGSGGGRFVTYPPPLSVPPSAPQSPNFSGGL 295
Query: 989 RSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHLFRLMNQEI 864
RSQPSFLVEQEKYLSELLAERHKLTPFLPVLPH+ RLMNQEI
Sbjct: 296 RSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHVCRLMNQEI 337
>TAIR9_protein||AT5G56140.1 | Symbols: | KH domain-containing protein |
chr5:22725462-22727932 FORWARD
Length = 316
Score = 310 bits (792), Expect = 2e-084
Identities = 157/177 (88%), Positives = 167/177 (94%), Gaps = 3/177 (1%)
Frame = -3
Query: 874 TKRSLSSSPAPNWLNSPGSSSGLIVKRSIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEA 695
++RS+ SSP PNWLNSPGSSSGLI KR+IRVDIPVD YPN+NFVGRLLGPRGNSLKRVEA
Sbjct: 140 SERSVPSSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEA 199
Query: 694 SSECRVLIRGRGSIKDPVKEEMMRGKPGYEHLNEQLHILVEAELPIEIVDARLMQAREIL 515
S++CRVLIRGRGSIKDP+KEEMMRGKPGYEHLNE LHILVEAELPIEIVDARLMQAREIL
Sbjct: 200 STDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREIL 259
Query: 514 ADLLTPVEETHDFYKKQQLRELALLNGSLREEGSPSPMSGSVSPYNNSLGMKRAKTR 344
DLLTP+EETHD YKKQQLRELALLNG+LREEG SPMSGSVSPY NSLGMKRAKTR
Sbjct: 260 DDLLTPMEETHDMYKKQQLRELALLNGTLREEG--SPMSGSVSPY-NSLGMKRAKTR 313
Score = 133 bits (334), Expect = 2e-031
Identities = 64/75 (85%), Positives = 67/75 (89%)
Frame = -2
Query: 1088 GMDGGGGGRFMTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPF 909
G+ GGGGGRFMTY LSVPPSAPQSPN+SGGLRSQ S VEQEKYLSELLAERHKLTPF
Sbjct: 20 GIGGGGGGRFMTYSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPF 79
Query: 908 LPVLPHLFRLMNQEI 864
LPVLPH FRL+NQEI
Sbjct: 80 LPVLPHAFRLLNQEI 94
>TAIR9_protein||AT3G08620.1 | Symbols: | KH domain-containing protein |
chr3:2617925-2620314 FORWARD
Length = 284
Score = 223 bits (567), Expect = 2e-058
Identities = 112/167 (67%), Positives = 138/167 (82%), Gaps = 3/167 (1%)
Frame = -3
Query: 847 APNWLNSPGSSSGLIVKRSIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASSECRVLIR 668
A W +P S S VKR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA++ CRV IR
Sbjct: 118 AMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIR 177
Query: 667 GRGSIKDPVKEEMMRGKPGYEHLNEQLHILVEAELPIEIVDARLMQAREILADLLTPVEE 488
G+GSIKDP KEE ++GKPGYEHLNEQLHIL+EA+LPI+IVD +L QA+EI+ +L+ PV+E
Sbjct: 178 GKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDE 237
Query: 487 THDFYKKQQLRELALLNGSLREEGSPSPMSGSVSPYNNSLGMKRAKT 347
+ D+ K+QQLRELALLN +LR E SP P SGSVSP+N++ MKR KT
Sbjct: 238 SQDYIKRQQLRELALLNSNLR-ENSPGP-SGSVSPFNSN-AMKRPKT 281
>TAIR9_protein||AT2G38610.1 | Symbols: | KH domain-containing protein |
chr2:16147552-16149638 REVERSE
Length = 287
Score = 219 bits (556), Expect = 4e-057
Identities = 112/179 (62%), Positives = 139/179 (77%), Gaps = 5/179 (2%)
Frame = -3
Query: 874 TKRSLSSSP--APNWLNSPGSSSGLIVKRSIRVDIPVDKYPNYNFVGRLLGPRGNSLKRV 701
++ LS +P +W +PGS S VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRV
Sbjct: 108 SQERLSGTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRV 167
Query: 700 EASSECRVLIRGRGSIKDPVKEEMMRGKPGYEHLNEQLHILVEAELPIEIVDARLMQARE 521
EA++ CRV IRG+GSIKDP KE+ +RG+PGYEHLNEQLHIL+EA+LP IV+ RL QA+E
Sbjct: 168 EATTGCRVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQE 227
Query: 520 ILADLLTPVEETHDFYKKQQLRELALLNGSLREEGSPSPM-SGSVSPYNNSLGMKRAKT 347
I+ +LL PV+E+ DF K+QQLRELALLN + E SP P GSVSP+N+S KR KT
Sbjct: 228 IIEELLKPVDESQDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSS--GKRPKT 284
>TAIR9_protein||AT2G38610.2 | Symbols: | KH domain-containing protein |
chr2:16147552-16149638 REVERSE
Length = 287
Score = 219 bits (556), Expect = 4e-057
Identities = 112/179 (62%), Positives = 139/179 (77%), Gaps = 5/179 (2%)
Frame = -3
Query: 874 TKRSLSSSP--APNWLNSPGSSSGLIVKRSIRVDIPVDKYPNYNFVGRLLGPRGNSLKRV 701
++ LS +P +W +PGS S VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRV
Sbjct: 108 SQERLSGTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRV 167
Query: 700 EASSECRVLIRGRGSIKDPVKEEMMRGKPGYEHLNEQLHILVEAELPIEIVDARLMQARE 521
EA++ CRV IRG+GSIKDP KE+ +RG+PGYEHLNEQLHIL+EA+LP IV+ RL QA+E
Sbjct: 168 EATTGCRVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQE 227
Query: 520 ILADLLTPVEETHDFYKKQQLRELALLNGSLREEGSPSPM-SGSVSPYNNSLGMKRAKT 347
I+ +LL PV+E+ DF K+QQLRELALLN + E SP P GSVSP+N+S KR KT
Sbjct: 228 IIEELLKPVDESQDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSS--GKRPKT 284
>TAIR9_protein||AT1G09660.1 | Symbols: | KH domain-containing quaking protein,
putative | chr1:3128032-3130791 REVERSE
Length = 299
Score = 205 bits (520), Expect = 7e-053
Identities = 105/174 (60%), Positives = 135/174 (77%), Gaps = 11/174 (6%)
Frame = -3
Query: 850 PAP-NWLNSPGSSSGLIVKRSIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASSECRVL 674
P+P W+ PG + IVK+ IR+D+PVDKYP+YNFVGR+LGPRGNSLKRVE ++ CRV
Sbjct: 128 PSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVF 187
Query: 673 IRGRGSIKDPVKEEMMRGKPGYEHLNEQLHILVEAELPIEIVDARLMQAREILADLLTPV 494
IRGRGS+KD VKEE ++GKPGYEHL E LH+L+EAELP +I+++RL A L LL P+
Sbjct: 188 IRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPM 247
Query: 493 EETHDFYKKQQLRELALLNGSLREEGSPSP-----MSGSVSPYNNSLGMKRAKT 347
+E+ D YK++QL+ELA LNG+LREE SPSP +S S+SP+N+ KRAKT
Sbjct: 248 DESMDHYKREQLKELAALNGTLREE-SPSPSLSPCLSPSMSPFNS----KRAKT 296
>TAIR9_protein||AT1G09660.2 | Symbols: | KH domain-containing quaking protein,
putative | chr1:3128205-3130791 REVERSE
Length = 265
Score = 161 bits (407), Expect = 8e-040
Identities = 77/132 (58%), Positives = 100/132 (75%), Gaps = 3/132 (2%)
Frame = -3
Query: 850 PAP-NWLNSPGSSSGLIVKRSIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASSECRVL 674
P+P W+ PG + IVK+ IR+D+PVDKYP+YNFVGR+LGPRGNSLKRVE ++ CRV
Sbjct: 128 PSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVF 187
Query: 673 IRGRGSIKDPVKEEMMRGKPGYEHLNEQLHILVEAELPIEIVDARLMQAREILADLLTPV 494
IRGRGS+KD VKEE ++GKPGYEHL E LH+L+EAELP +I+++RL A L LL P+
Sbjct: 188 IRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPM 247
Query: 493 EETHDFYKKQQL 458
H ++K +
Sbjct: 248 --VHSYHKSPNM 257
>TAIR9_protein||AT5G51300.1 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE
Length = 805
Score = 96 bits (237), Expect = 4e-020
Identities = 50/120 (41%), Positives = 78/120 (65%), Gaps = 6/120 (5%)
Frame = -3
Query: 778 IPVDKYPNYNFVGRLLGPRGNSLKRVEASSECRVLIRGRGSIKDPVKEEMMRGKPGYEHL 599
IP+ ++P YNF+G ++GPRGN+ KR+E + +++IRG+GS+K+ + + +
Sbjct: 247 IPMKEFPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEG-RHQQKKDLKYDPSE 305
Query: 598 NEQLHILVEAELPIEIVDARLMQAREILADLLTPVEETHDFYKKQQLRELALLNGSLREE 419
NE LH+LVEAE L A ++ LL PV+E + +K+QQLRELA LNG++R+E
Sbjct: 306 NEDLHVLVEAE-----TQEALEAAAGMVEKLLQPVDEVLNEHKRQQLRELATLNGTIRDE 360
>TAIR9_protein||AT5G51300.2 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE
Length = 805
Score = 96 bits (237), Expect = 4e-020
Identities = 50/120 (41%), Positives = 78/120 (65%), Gaps = 6/120 (5%)
Frame = -3
Query: 778 IPVDKYPNYNFVGRLLGPRGNSLKRVEASSECRVLIRGRGSIKDPVKEEMMRGKPGYEHL 599
IP+ ++P YNF+G ++GPRGN+ KR+E + +++IRG+GS+K+ + + +
Sbjct: 247 IPMKEFPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEG-RHQQKKDLKYDPSE 305
Query: 598 NEQLHILVEAELPIEIVDARLMQAREILADLLTPVEETHDFYKKQQLRELALLNGSLREE 419
NE LH+LVEAE L A ++ LL PV+E + +K+QQLRELA LNG++R+E
Sbjct: 306 NEDLHVLVEAE-----TQEALEAAAGMVEKLLQPVDEVLNEHKRQQLRELATLNGTIRDE 360
>TAIR9_protein||AT5G51300.3 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE
Length = 805
Score = 96 bits (237), Expect = 4e-020
Identities = 50/120 (41%), Positives = 78/120 (65%), Gaps = 6/120 (5%)
Frame = -3
Query: 778 IPVDKYPNYNFVGRLLGPRGNSLKRVEASSECRVLIRGRGSIKDPVKEEMMRGKPGYEHL 599
IP+ ++P YNF+G ++GPRGN+ KR+E + +++IRG+GS+K+ + + +
Sbjct: 247 IPMKEFPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEG-RHQQKKDLKYDPSE 305
Query: 598 NEQLHILVEAELPIEIVDARLMQAREILADLLTPVEETHDFYKKQQLRELALLNGSLREE 419
NE LH+LVEAE L A ++ LL PV+E + +K+QQLRELA LNG++R+E
Sbjct: 306 NEDLHVLVEAE-----TQEALEAAAGMVEKLLQPVDEVLNEHKRQQLRELATLNGTIRDE 360
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,720,127,754
Number of Sequences: 33410
Number of Extensions: 22720127754
Number of Successful Extensions: 718150589
Number of sequences better than 0.0: 0
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