BLASTX 7.6.2
Query= UN47475 /QuerySize=973
(972 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G13140.1 | Symbols: | FUNCTIONS IN: molecular... 462 2e-130
TAIR9_protein||AT3G26960.1 | Symbols: | unknown protein | chr3:... 138 7e-033
TAIR9_protein||AT5G41050.1 | Symbols: | unknown protein | chr5:... 136 3e-032
>TAIR9_protein||AT5G13140.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pollen Ole e 1 allergen and extensin (InterPro:IPR006041);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G26960.1); Has 90 Blast hits to 85 proteins in 14 species:
Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 83; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr5:4170688-4171744
REVERSE
Length = 268
Score = 462 bits (1188), Expect = 2e-130
Identities = 213/268 (79%), Positives = 233/268 (86%)
Frame = -2
Query: 923 MYLPLLCLLLLAPSLSHQAFGRGRGLSPPGGSSDPSSRITVVGVVYCDTCAINTFSRQSY 744
MYLPLL LL LA L+HQA GRGRG P GS DPSSRITVVGVVYCDTC+INTFSRQSY
Sbjct: 1 MYLPLLYLLFLASCLTHQALGRGRGRPSPEGSLDPSSRITVVGVVYCDTCSINTFSRQSY 60
Query: 743 FLQGVEVHVSCRFKASSPKTTEEVNISVNRTTNINGVYKLDIPHVDGIDCVDGIAIASQC 564
FLQGVEVHV+CRFKASSPKT EEVNISVNRTTN +GVYKL+IPHVDGIDCVDGIAI+SQC
Sbjct: 61 FLQGVEVHVTCRFKASSPKTAEEVNISVNRTTNRSGVYKLEIPHVDGIDCVDGIAISSQC 120
Query: 563 SAKLLKPSSDNNVGCNIPVFQTAANEVSIKSKQDRVCIYSLSALSYKPSHRNTTLCSGGK 384
SAK+LK SSD+N GC+IPVFQTA NEVSIKSKQDRVCIYSLSALSYKP H+NT+LC G
Sbjct: 121 SAKILKTSSDDNGGCSIPVFQTATNEVSIKSKQDRVCIYSLSALSYKPPHKNTSLCGNGG 180
Query: 383 RHRHQREEKVENKLRDSKLFWPYMPPYWFPWPYSTLPPLPTLPPLPSFPFPFLPLGNPNA 204
+ H+++EKVE K RDSK FWPY+ PYWFPWPY LPPLPTLPP PSFPFP LP GNPN
Sbjct: 181 KKHHRKDEKVEKKFRDSKFFWPYLAPYWFPWPYPDLPPLPTLPPFPSFPFPSLPFGNPNL 240
Query: 203 SFPAFDWRDPTTWIPYLPRFPPSDNNP* 120
+ PAFDW++P TWIPYLPRFPP D+NP*
Sbjct: 241 ALPAFDWKNPVTWIPYLPRFPPGDHNP* 268
>TAIR9_protein||AT3G26960.1 | Symbols: | unknown protein | chr3:9944859-9945459
REVERSE
Length = 175
Score = 138 bits (346), Expect = 7e-033
Identities = 63/142 (44%), Positives = 93/142 (65%), Gaps = 3/142 (2%)
Frame = -2
Query: 821 PSSRITVVGVVYCDTCAINTFSRQSYFLQGVEVHVSCRFKASSPKTTEEVNISVNRTTNI 642
P + IT++G VYCD C+ N+FS+ SYF+ GVEV + CRFKA+S TTE + S NRTTN
Sbjct: 33 PDAEITIMGFVYCDVCSKNSFSKHSYFMSGVEVRIVCRFKAASSTTTETITFSANRTTNE 92
Query: 641 NGVYKLDIPHVDGIDCVDGIAIASQCSAKLLKPSSDNNVGCNIPVFQTAANEVSIKSKQD 462
G+YK+ I +DC D ++AS C A L+ + ++ CNIP ++T ++V KS+Q
Sbjct: 93 FGLYKVAI---SSLDCADVDSLASSCQASLIGRKNFSDSSCNIPGYRTTTDQVLFKSQQS 149
Query: 461 RVCIYSLSALSYKPSHRNTTLC 396
C+Y +AL+++P R+ LC
Sbjct: 150 NSCVYGFNALNFRPFKRDLALC 171
>TAIR9_protein||AT5G41050.1 | Symbols: | unknown protein |
chr5:16433478-16434076 REVERSE
Length = 173
Score = 136 bits (341), Expect = 3e-032
Identities = 71/172 (41%), Positives = 104/172 (60%), Gaps = 12/172 (6%)
Frame = -2
Query: 902 LLLLAPSLSHQAFGRGRGLSPPGGSSDPSSRITVVGVVYCDTCAINTFSRQSYFLQGVEV 723
LLLL LS + LS S+ P+ +ITV+G+VYCD C+ N+FS SYF+ GVEV
Sbjct: 8 LLLLLQLLSLNS------LSLKHSSAKPNGKITVMGLVYCDVCSNNSFSNHSYFIPGVEV 61
Query: 722 HVSCRFKASSPKTTEEVNISVNRTTNINGVYKLDIPHVDGIDCVDGI---AIASQCSAKL 552
+ CRF ++S +T E + S NRTTN G+YKLDI ++G+ C ++ + C A L
Sbjct: 62 RIICRFNSASSRTREMITFSANRTTNELGLYKLDITSLEGVACAAEAKKDSLMASCQASL 121
Query: 551 LKPSSDNNVGCNIPVFQTAANEVSIKSKQDRVCIYSLSALSYKPSHRNTTLC 396
+ S D+ CN+P F+T +V KSK +C+Y +AL+++P +N LC
Sbjct: 122 IGRSKDS---CNVPGFRTTTEQVVFKSKISNLCVYGFTALNFRPLEKNLHLC 170
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,720,127,754
Number of Sequences: 33410
Number of Extensions: 22720127754
Number of Successful Extensions: 718150589
Number of sequences better than 0.0: 0
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