Library    |     Search    |     Batch query    |     SNP    |     SSR  

SwissProt blast output of UN47584


BLASTX 7.6.2

Query= UN47584 /QuerySize=972
        (971 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q7LZR2|CO8A1_CHICK Collagen alpha-1(VIII) chain OS=Gallus gal...     52   7e-006
sp|Q00780|CO8A1_MOUSE Collagen alpha-1(VIII) chain OS=Mus muscul...     52   7e-006
sp|P14282|CO8A1_RABIT Collagen alpha-1(VIII) chain OS=Oryctolagu...     52   7e-006
sp|P27658|CO8A1_HUMAN Collagen alpha-1(VIII) chain OS=Homo sapie...     51   1e-005

>sp|Q7LZR2|CO8A1_CHICK Collagen alpha-1(VIII) chain OS=Gallus gallus GN=COL8A1
        PE=3 SV=1

          Length = 744

 Score =  52 bits (122), Expect = 7e-006
 Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
 Frame = -1

Query: 812 GVPEPSMAPGIQGPPSVVGQVSAVPEPSMAPGIQGPPGVVGQVSGVPEPSMAPAPGIQGP 633
           G+P P   PG+ GPP   G    V +P +A G+ GPPG  G +    +P +   PG  GP
Sbjct: 513 GIPGPKGEPGLPGPPGFPG----VGKPGVA-GLHGPPGKPGALGPQGQPGLPGPPGPPGP 567

Query: 632 PLPPVV 615
           P PP V
Sbjct: 568 PGPPAV 573

>sp|Q00780|CO8A1_MOUSE Collagen alpha-1(VIII) chain OS=Mus musculus GN=Col8a1
        PE=1 SV=3

          Length = 744

 Score =  52 bits (122), Expect = 7e-006
 Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
 Frame = -1

Query: 812 GVPEPSMAPGIQGPPSVVGQVSAVPEPSMAPGIQGPPGVVGQVSGVPEPSMAPAPGIQGP 633
           G+P P   PG+ GPP   G    V +P +A G+ GPPG  G +    +P +   PG  GP
Sbjct: 514 GIPGPKGEPGLPGPPGFPG----VGKPGVA-GLHGPPGKPGALGPQGQPGLPGPPGPPGP 568

Query: 632 PLPPVV 615
           P PP V
Sbjct: 569 PGPPAV 574

>sp|P14282|CO8A1_RABIT Collagen alpha-1(VIII) chain OS=Oryctolagus cuniculus
        GN=COL8A1 PE=2 SV=1

          Length = 744

 Score =  52 bits (122), Expect = 7e-006
 Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
 Frame = -1

Query: 812 GVPEPSMAPGIQGPPSVVGQVSAVPEPSMAPGIQGPPGVVGQVSGVPEPSMAPAPGIQGP 633
           G+P P   PG+ GPP   G    V +P +A G+ GPPG  G +    +P +   PG  GP
Sbjct: 513 GIPGPKGEPGLPGPPGFPG----VGKPGVA-GLHGPPGKPGALGPQGQPGLPGPPGPPGP 567

Query: 632 PLPPVV 615
           P PP V
Sbjct: 568 PGPPAV 573

>sp|P27658|CO8A1_HUMAN Collagen alpha-1(VIII) chain OS=Homo sapiens GN=COL8A1
        PE=1 SV=2

          Length = 744

 Score =  51 bits (121), Expect = 1e-005
 Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
 Frame = -1

Query: 812 GVPEPSMAPGIQGPPSVVGQVSAVPEPSMAPGIQGPPGVVGQVSGVPEPSMAPAPGIQGP 633
           G+P P   PG+ GPP   G    + +P +A G+ GPPG  G +    +P +   PG  GP
Sbjct: 513 GIPGPKGEPGLPGPPGFPG----IGKPGVA-GLHGPPGKPGALGPQGQPGLPGPPGPPGP 567

Query: 632 PLPPVV 615
           P PP V
Sbjct: 568 PGPPAV 573

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 177,416,216,708
Number of Sequences: 518415
Number of Extensions: 177416216708
Number of Successful Extensions: 1076203161
Number of sequences better than 0.0: 0