BLASTX 7.6.2
Query= UN47649 /QuerySize=1102
(1101 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=... 288 6e-077
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O... 171 1e-041
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=... 169 5e-041
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=... 162 6e-039
sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=S... 149 5e-035
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=... 101 2e-020
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=... 99 5e-020
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O... 98 8e-020
sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic ... 96 4e-019
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=... 94 1e-018
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=... 89 7e-017
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 87 2e-016
>sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 324
Score = 288 bits (736), Expect = 6e-077
Identities = 144/240 (60%), Positives = 193/240 (80%), Gaps = 4/240 (1%)
Frame = +3
Query: 216 EDELPVASEDEEEEEDVKQTTQATG-EEGRLYVGNLPYTITSSELSQLFRQAGTVVDVQI 392
E+E+ +++E+EEE E+ ++ ++ E GRLYVGNLP+++TSS+LS++F +AGTV +V+I
Sbjct: 86 EEEVALSAEEEEEIEEKEERVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEI 145
Query: 393 VYDKVTDRSRGFGFVTMGSIEEAEEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRAAK 572
VYD+VTDRSRGF FVTMGS+EEA+EAI++F+ SQ+GGRTVKVNFPEVPRGGEREVM +AK
Sbjct: 146 VYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVM-SAK 204
Query: 573 IRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFGDQPGVLGAKVVYERDSGRSRGFGFVS 752
IR + +VDSPHKLY NL W LTSQGL+DAF DQPG + AKV+Y+R SGRSRGFGF++
Sbjct: 205 IRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFIT 264
Query: 753 FESAQDLQFALRAMNGVEVEGRELRLNLASERATVSRPFVTEEG--SSLESSGMFSNIST 926
F SA+ + AL MN VE+EGR LRLN+A ++A VS P V E + ++S + S++S+
Sbjct: 265 FSSAEAMNSALDTMNEVELEGRPLRLNVAGQKAPVSSPPVVETSPENDSDNSELLSSLSS 324
>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 273
Score = 171 bits (432), Expect = 1e-041
Identities = 95/245 (38%), Positives = 147/245 (60%), Gaps = 9/245 (3%)
Frame = +3
Query: 114 FNRFPPKSFKLVASLRNPISLHSNIRRHRFSCATEDELPVASEDEEEEEDVKQTTQATGE 293
F PP S L SL + S S+ + + + D++ ED E+ +D + +
Sbjct: 32 FFSLPPSSLNL--SLSSSSSCFSSRFVRKVTLSDFDQI----EDVEDGDDGVEEERNFSP 85
Query: 294 EGRLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAEEAI 473
+ +++VGNLP++ S+ L++LF +AG V V+++YDK+T RSRGFGFVTM S EE E A
Sbjct: 86 DLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAAC 145
Query: 474 QMFNTSQIGGRTVKVNFPEVPRGGEREVMRAAKIRDGNRSYVDSPHKLYAGNLGWDLTSQ 653
Q FN ++ GR ++VN P E R G+ DS +++Y GNL W +
Sbjct: 146 QQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGS---FDSSNRVYVGNLAWGVDQD 202
Query: 654 GLKDAFGDQPGVLGAKVVYERDSGRSRGFGFVSFESAQDLQFALRAMNGVEVEGRELRLN 833
L+ F +Q V+ AKVVY+RDSGRSRGFGFV++ SA+++ A+ +++GV++ GR +R++
Sbjct: 203 ALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVS 262
Query: 834 LASER 848
A R
Sbjct: 263 PAEAR 267
>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 279
Score = 169 bits (426), Expect = 5e-041
Identities = 96/248 (38%), Positives = 149/248 (60%), Gaps = 9/248 (3%)
Frame = +3
Query: 114 FNRFPPKSFKLVASLRNPISLHSNIRRHRFSCATEDELPVASEDEEEEEDVKQTTQATGE 293
F PP S L SL +P S S+ + + D++ ED E+ ++ + +
Sbjct: 32 FFSLPPSSLNL--SLSSPSSCFSSRFVRKVTLPDFDQI----EDVEDGDEGVEEERNFSP 85
Query: 294 EGRLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAEEAI 473
+ +++VGNL ++ S+ L++LF +AG V V+++YDK+T RSRGFGFVTM S EE E A
Sbjct: 86 DLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAAC 145
Query: 474 QMFNTSQIGGRTVKVNFPEVPRGGEREVMRA-AKIRDGNR--SYVDSPHKLYAGNLGWDL 644
Q FN ++ GR ++VN P E R + R G+R DS +++Y GNL W +
Sbjct: 146 QQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGV 205
Query: 645 TSQGLKDAFGDQPGVLGAKVVYERDSGRSRGFGFVSFESAQDLQFALRAMNGVEVEGREL 824
L+ F +Q V+ AKVVY+RDSGRSRGFGFV++ SA+++ A+ +++GV++ GR +
Sbjct: 206 DQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAI 265
Query: 825 RLNLASER 848
R++ A R
Sbjct: 266 RVSPAEAR 273
>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP31 PE=1 SV=1
Length = 329
Score = 162 bits (408), Expect = 6e-039
Identities = 87/211 (41%), Positives = 129/211 (61%), Gaps = 17/211 (8%)
Frame = +3
Query: 237 SEDEEEEEDVKQTTQA-------TGEEGRLYVGNLPYTITSSELSQLFRQAGTVVDVQIV 395
SE +E E DV + + EE +L+VGNL Y + S L+ LF QAGTV +++
Sbjct: 123 SEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVI 182
Query: 396 YDKVTDRSRGFGFVTMGSIEEAEEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRAAKI 575
Y++ TD+SRGFGFVTM S++EAE A++ FN + GR + VN PRG E RA ++
Sbjct: 183 YNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN-KAAPRGSRPE--RAPRV 239
Query: 576 RDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFGDQPGVLGAKVVYERDSGRSRGFGFVSF 755
+ ++Y GNL WD+ + L+ F + V+ A+VVY+R++GRSRGFGFV+
Sbjct: 240 -------YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTM 292
Query: 756 ESAQDLQFALRAMNGVEVEGRELRLNLASER 848
+L A+ A++G +EGR +R+N+A ER
Sbjct: 293 SDVDELNEAISALDGQNLEGRAIRVNVAEER 323
Score = 83 bits (204), Expect = 3e-015
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Frame = +3
Query: 300 RLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAEEAIQM 479
R+YVGNLP+ + + L QLF + G VV+ ++VYD+ T RSRGFGFVTM ++E EAI
Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304
Query: 480 FNTSQIGGRTVKVNFPE--VPRGG 545
+ + GR ++VN E PR G
Sbjct: 305 LDGQNLEGRAIRVNVAEERPPRRG 328
>sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=Spinacia
oleracea GN=PSRP2 PE=1 SV=1
Length = 260
Score = 149 bits (374), Expect = 5e-035
Identities = 78/199 (39%), Positives = 124/199 (62%), Gaps = 8/199 (4%)
Frame = +3
Query: 255 EEDVKQTTQATGEEG----RLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSR 422
EE +T ++ +G RLYVGN+P + + EL + + G + +++YDK + RSR
Sbjct: 66 EETSSSSTASSSSDGEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSR 125
Query: 423 GFGFVTMGSIEEAEEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRAAKIRDGNRSYVD 602
FGFVTM ++E+A I+ N ++IGGR +KVN E P G M A + + +V+
Sbjct: 126 RFGFVTMKTVEDANAVIEKLNDTEIGGRKIKVNITEKPLEG----MDIATTQAEDSQFVE 181
Query: 603 SPHKLYAGNLGWDLTSQGLKDAFGDQPGVLGAKVVYERDSGRSRGFGFVSFESAQDLQFA 782
SP+K+Y GNL +T++ LKD F ++ VLGAKV + +S GFGFVSF S ++++ A
Sbjct: 182 SPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAA 241
Query: 783 LRAMNGVEVEGRELRLNLA 839
++A+N +EG+++R+N A
Sbjct: 242 IQALNNSVLEGQKIRVNKA 260
>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 315
Score = 101 bits (249), Expect = 2e-020
Identities = 50/119 (42%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
Frame = +3
Query: 243 DEEEEEDVKQTTQATGEEGRLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSR 422
DE E ++ ++ Q E+ +L+VGNLPY + S L++LF QAG V +++Y++ TD+SR
Sbjct: 118 DEVEADEEEEEFQEPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSR 177
Query: 423 GFGFVTMGSIEEAEEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRAAKIRDGNRSYV 599
GFGFVTM ++EEAE+A++M+N + GR + VN + R GER R YV
Sbjct: 178 GFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVN--KAARRGERPERPPRTFEQSYRIYV 234
Score = 80 bits (196), Expect = 2e-014
Identities = 38/77 (49%), Positives = 51/77 (66%)
Frame = +3
Query: 300 RLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAEEAIQM 479
R+YVGN+P+ I + L QLF + G VV ++VYD+ T RSRGFGFVTM S E +AI
Sbjct: 231 RIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIAN 290
Query: 480 FNTSQIGGRTVKVNFPE 530
+ + GRT++VN E
Sbjct: 291 LDGQSLDGRTIRVNVAE 307
>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 292
Score = 99 bits (245), Expect = 5e-020
Identities = 46/99 (46%), Positives = 70/99 (70%), Gaps = 8/99 (8%)
Frame = +3
Query: 576 RDGNRSY--------VDSPHKLYAGNLGWDLTSQGLKDAFGDQPGVLGAKVVYERDSGRS 731
RDGN S+ VDS +++Y GNL W + LK+ F +Q V+ AKVVY+RDSGRS
Sbjct: 189 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 248
Query: 732 RGFGFVSFESAQDLQFALRAMNGVEVEGRELRLNLASER 848
RGFGFV++ SA+++ A+ ++NG++++GR +R++ A ER
Sbjct: 249 RGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEER 287
Score = 96 bits (237), Expect = 4e-019
Identities = 67/177 (37%), Positives = 100/177 (56%), Gaps = 8/177 (4%)
Frame = +3
Query: 72 STSTFNPLFPSLRL-FNRFPPKSFKLVASLRNPISLHSNIRRHRFSCATEDELPVASEDE 248
++ T + L P+ L F P S L S + I ++I+ S +T L S+ +
Sbjct: 15 TSQTPSSLKPNSTLSFFSLPSSSLNLSLS-SSSIGHSASIKPFESSFSTRVAL---SDFD 70
Query: 249 EEEEDVKQTTQAT-GEEGRLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRG 425
+ E+DV+ Q E+ +L+VGNLP+++ S+ L+ LF +AG V V+++YDK++ RSRG
Sbjct: 71 QLEDDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRG 130
Query: 426 FGFVTMGSIEEAEEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRAAKIRDGNRSY 596
FGFVTM + EE E A Q FN +I GR ++VN P +RE R GN SY
Sbjct: 131 FGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAP--AKRENSSFGGGRGGNSSY 185
>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 291
Score = 98 bits (243), Expect = 8e-020
Identities = 46/99 (46%), Positives = 70/99 (70%), Gaps = 8/99 (8%)
Frame = +3
Query: 576 RDGNRSY--------VDSPHKLYAGNLGWDLTSQGLKDAFGDQPGVLGAKVVYERDSGRS 731
RDGN S+ VDS +++Y GNL W + LK+ F +Q V+ AKVVY+RDSGRS
Sbjct: 188 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 247
Query: 732 RGFGFVSFESAQDLQFALRAMNGVEVEGRELRLNLASER 848
RGFGFV++ S++++ A+ ++NGV+++GR +R++ A ER
Sbjct: 248 RGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEER 286
Score = 96 bits (237), Expect = 4e-019
Identities = 72/188 (38%), Positives = 104/188 (55%), Gaps = 17/188 (9%)
Frame = +3
Query: 66 ASSTSTFNPLFPSLRLFNRFPPKS----FKLVASLRNPISLHS------NIRRHRFSCAT 215
+SS S+ LF + + + P S F L +S N +SL S +I+ S +T
Sbjct: 3 SSSVSSLQFLFVTPQTPSSLKPNSTLSFFSLPSSSLN-LSLSSSSTGLCSIKPFESSFST 61
Query: 216 EDELPVASEDEEEEEDVKQTTQAT-GEEGRLYVGNLPYTITSSELSQLFRQAGTVVDVQI 392
L S ++ E+DV+ Q E+ +L+VGNLP+++ S+ L+ LF +AG V V++
Sbjct: 62 RVAL---SGFDQLEDDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEV 118
Query: 393 VYDKVTDRSRGFGFVTMGSIEEAEEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRAAK 572
+YDK+T RSRGFGFVTM + EE E A Q FN +I GR ++VN P +RE
Sbjct: 119 IYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAP--AKRENSSFGG 176
Query: 573 IRDGNRSY 596
R GN SY
Sbjct: 177 GRGGNSSY 184
>sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis
thaliana GN=At2g37220 PE=1 SV=1
Length = 289
Score = 96 bits (237), Expect = 4e-019
Identities = 66/175 (37%), Positives = 91/175 (52%), Gaps = 15/175 (8%)
Frame = +3
Query: 126 PPKSFKLVA-SLRNPISLHSNIRRHRFSCATEDELPVASEDEEEEEDVKQTT----QATG 290
P SFKL + S+ I+ N RF+ + + SE E EE+ Q+
Sbjct: 33 PSLSFKLNSDSVSFSIAAKWNSPASRFA----RNVAITSEFEVEEDGFADVAPPKEQSFS 88
Query: 291 EEGRLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAEEA 470
+ +L+VGNLP+ + S++L+QLF AG V V+++YDK+T RSRGFGFVTM S+ E E A
Sbjct: 89 ADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAA 148
Query: 471 IQMFNTSQIGGRTVKVNFPEVPRGGEREVMRAAKIRDGNRSYVDSPHKLYAGNLG 635
Q FN ++ GR ++VN P E R G RS S Y G G
Sbjct: 149 AQQFNGYELDGRPLRVNAGPPPPKREDGFSR------GPRSSFGSSGSGYGGGGG 197
Score = 86 bits (212), Expect = 3e-016
Identities = 36/89 (40%), Positives = 65/89 (73%)
Frame = +3
Query: 582 GNRSYVDSPHKLYAGNLGWDLTSQGLKDAFGDQPGVLGAKVVYERDSGRSRGFGFVSFES 761
G S S +++Y GNL W + L+ F +Q V+ A+V+Y+RDSGRS+GFGFV+++S
Sbjct: 195 GGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDS 254
Query: 762 AQDLQFALRAMNGVEVEGRELRLNLASER 848
+Q++Q A+++++G +++GR++R++ A R
Sbjct: 255 SQEVQNAIKSLDGADLDGRQIRVSEAEAR 283
>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 276
Score = 94 bits (233), Expect = 1e-018
Identities = 44/92 (47%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Frame = +3
Query: 279 QATGEEGRLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEE 458
Q E+ +L+VGNLPY I S L+QLF+QAG V +++Y++ TDRSRGFGFVTM ++EE
Sbjct: 91 QEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEE 150
Query: 459 AEEAIQMFNTSQIGGRTVKVNFPEVPRGGERE 554
A++A+++++ + GR + VN PRG E
Sbjct: 151 ADKAVELYSQYDLNGRLLTVN-KAAPRGSRPE 181
Score = 77 bits (187), Expect = 3e-013
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = +3
Query: 300 RLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAEEAIQM 479
R+YVGN+P+ I + L Q+F + G VV ++V+D+ + RSRGFGFVTM S E EAI
Sbjct: 192 RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIAN 251
Query: 480 FNTSQIGGRTVKVNFPE 530
+ + GRT++VN E
Sbjct: 252 LDGQTLDGRTIRVNAAE 268
>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia
oleracea PE=1 SV=1
Length = 233
Score = 89 bits (218), Expect = 7e-017
Identities = 42/91 (46%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Frame = +3
Query: 291 EEGRLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAEEA 470
EE +L+VGNLPY + S +L+ +F AG V +++Y++ TDRSRGFGFVTM ++EEAE+A
Sbjct: 53 EEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 112
Query: 471 IQMFNTSQIGGRTVKVNFPEVPRGGEREVMR 563
+++ N + GR + VN PRG R
Sbjct: 113 VELLNGYDMDGRQLTVN-KAAPRGSPERAPR 142
Score = 78 bits (190), Expect = 1e-013
Identities = 38/77 (49%), Positives = 50/77 (64%)
Frame = +3
Query: 300 RLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAEEAIQM 479
R+YVGNLP+ + +S L QLF + G VV ++V D+ T RSRGFGFVTM S E +AI
Sbjct: 150 RVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAA 209
Query: 480 FNTSQIGGRTVKVNFPE 530
+ + GR V+VN E
Sbjct: 210 LDGQTLDGRAVRVNVAE 226
>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP29 PE=1 SV=2
Length = 342
Score = 87 bits (213), Expect = 2e-016
Identities = 38/89 (42%), Positives = 64/89 (71%)
Frame = +3
Query: 582 GNRSYVDSPHKLYAGNLGWDLTSQGLKDAFGDQPGVLGAKVVYERDSGRSRGFGFVSFES 761
G+ S S ++LY GNL W + L++ F +Q V+ A+V+Y+RDSGRS+GFGFV+ S
Sbjct: 248 GSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSS 307
Query: 762 AQDLQFALRAMNGVEVEGRELRLNLASER 848
+Q++Q A+ ++NG +++GR++R++ A R
Sbjct: 308 SQEVQKAINSLNGADLDGRQIRVSEAEAR 336
Score = 85 bits (209), Expect = 7e-016
Identities = 42/91 (46%), Positives = 57/91 (62%)
Frame = +3
Query: 300 RLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAEEAIQM 479
+L+VGNL + + S++L+QLF AG V V+++YDKVT RSRGFGFVTM + E E A Q
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 480 FNTSQIGGRTVKVNFPEVPRGGEREVMRAAK 572
FN + GR ++VN P E R +
Sbjct: 160 FNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 177,416,216,708
Number of Sequences: 518415
Number of Extensions: 177416216708
Number of Successful Extensions: 1076203161
Number of sequences better than 0.0: 0
|