BLASTX 7.6.2
Query= UN47649 /QuerySize=1102
(1101 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA b... 364 7e-101
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 162 5e-040
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 96 4e-020
TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotei... 96 4e-020
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 89 4e-018
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 87 2e-017
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 87 2e-017
TAIR9_protein||AT5G06210.1 | Symbols: | RNA-binding protein, pu... 83 3e-016
TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 77 1e-014
TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 77 1e-014
TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 74 1e-013
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 73 3e-013
>TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA binding |
chr3:19421619-19422855 FORWARD
Length = 330
Score = 364 bits (933), Expect = 7e-101
Identities = 192/248 (77%), Positives = 215/248 (86%), Gaps = 9/248 (3%)
Frame = +3
Query: 210 ATEDELPVASEDEEEEEDV---KQTTQATGEEGRLYVGNLPYTITSSELSQLFRQAGTVV 380
+ E+E V E +E EE+V KQTTQA+GEEGRLYVGNLPYTITSSELSQ+F +AGTVV
Sbjct: 84 SVEEEEEVEEEGDEGEEEVEEEKQTTQASGEEGRLYVGNLPYTITSSELSQIFGEAGTVV 143
Query: 381 DVQIVYDKVTDRSRGFGFVTMGSIEEAEEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVM 560
DVQIVYDKVTDRSRGFGFVTMGSIEEA+EA+QMFN+SQIGGRTVKVNFPEVPRGGE EVM
Sbjct: 144 DVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEVM 203
Query: 561 RAAKIRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFGDQPGVLGAKVVYERDSGRSRGF 740
R KIRD NRSYVDSPHK+YAGNLGW+LTSQGLKDAFGDQPGVLGAKV+YER++GRSRGF
Sbjct: 204 R-TKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGF 262
Query: 741 GFVSFESAQDLQFALRAMNGVEVEGRELRLNLASER--ATVSRPFVTE---EGSSLESSG 905
GF+SFESA+++Q AL MNGVEVEGR LRLNLASER TVS P V E E +SLES+
Sbjct: 263 GFISFESAENVQSALATMNGVEVEGRALRLNLASEREKPTVSPPSVEEGETEEASLESNE 322
Query: 906 MFSNIST* 929
+ SN+S *
Sbjct: 323 VLSNVSA* 330
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 162 bits (408), Expect = 5e-040
Identities = 87/211 (41%), Positives = 129/211 (61%), Gaps = 17/211 (8%)
Frame = +3
Query: 237 SEDEEEEEDVKQTTQA-------TGEEGRLYVGNLPYTITSSELSQLFRQAGTVVDVQIV 395
SE +E E DV + + EE +L+VGNL Y + S L+ LF QAGTV +++
Sbjct: 123 SEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVI 182
Query: 396 YDKVTDRSRGFGFVTMGSIEEAEEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRAAKI 575
Y++ TD+SRGFGFVTM S++EAE A++ FN + GR + VN PRG E RA ++
Sbjct: 183 YNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN-KAAPRGSRPE--RAPRV 239
Query: 576 RDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFGDQPGVLGAKVVYERDSGRSRGFGFVSF 755
+ ++Y GNL WD+ + L+ F + V+ A+VVY+R++GRSRGFGFV+
Sbjct: 240 -------YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTM 292
Query: 756 ESAQDLQFALRAMNGVEVEGRELRLNLASER 848
+L A+ A++G +EGR +R+N+A ER
Sbjct: 293 SDVDELNEAISALDGQNLEGRAIRVNVAEER 323
Score = 83 bits (204), Expect = 2e-016
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Frame = +3
Query: 300 RLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAEEAIQM 479
R+YVGNLP+ + + L QLF + G VV+ ++VYD+ T RSRGFGFVTM ++E EAI
Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304
Query: 480 FNTSQIGGRTVKVNFPE--VPRGG 545
+ + GR ++VN E PR G
Sbjct: 305 LDGQNLEGRAIRVNVAEERPPRRG 328
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 96 bits (237), Expect = 4e-020
Identities = 66/175 (37%), Positives = 91/175 (52%), Gaps = 15/175 (8%)
Frame = +3
Query: 126 PPKSFKLVA-SLRNPISLHSNIRRHRFSCATEDELPVASEDEEEEEDVKQTT----QATG 290
P SFKL + S+ I+ N RF+ + + SE E EE+ Q+
Sbjct: 33 PSLSFKLNSDSVSFSIAAKWNSPASRFA----RNVAITSEFEVEEDGFADVAPPKEQSFS 88
Query: 291 EEGRLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAEEA 470
+ +L+VGNLP+ + S++L+QLF AG V V+++YDK+T RSRGFGFVTM S+ E E A
Sbjct: 89 ADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAA 148
Query: 471 IQMFNTSQIGGRTVKVNFPEVPRGGEREVMRAAKIRDGNRSYVDSPHKLYAGNLG 635
Q FN ++ GR ++VN P E R G RS S Y G G
Sbjct: 149 AQQFNGYELDGRPLRVNAGPPPPKREDGFSR------GPRSSFGSSGSGYGGGGG 197
Score = 86 bits (212), Expect = 3e-017
Identities = 36/89 (40%), Positives = 65/89 (73%)
Frame = +3
Query: 582 GNRSYVDSPHKLYAGNLGWDLTSQGLKDAFGDQPGVLGAKVVYERDSGRSRGFGFVSFES 761
G S S +++Y GNL W + L+ F +Q V+ A+V+Y+RDSGRS+GFGFV+++S
Sbjct: 195 GGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDS 254
Query: 762 AQDLQFALRAMNGVEVEGRELRLNLASER 848
+Q++Q A+++++G +++GR++R++ A R
Sbjct: 255 SQEVQNAIKSLDGADLDGRQIRVSEAEAR 283
>TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein RNP-T, putative / RNA-binding protein
1/2/3, putative / RNA-binding protein cp31, putative |
chr5:20452677-20453965 REVERSE
Length = 290
Score = 96 bits (237), Expect = 4e-020
Identities = 45/88 (51%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Frame = +3
Query: 291 EEGRLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAEEA 470
EE +L+VGNLPY + S L+ LF QAGTV +++Y++ TD+SRGFGFVTM ++EEAE+A
Sbjct: 111 EEAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKA 170
Query: 471 IQMFNTSQIGGRTVKVNFPEVPRGGERE 554
++ FN+ ++ GR + VN PRG E
Sbjct: 171 VEKFNSFEVNGRRLTVN-RAAPRGSRPE 197
Score = 77 bits (187), Expect = 2e-014
Identities = 34/83 (40%), Positives = 56/83 (67%)
Frame = +3
Query: 600 DSPHKLYAGNLGWDLTSQGLKDAFGDQPGVLGAKVVYERDSGRSRGFGFVSFESAQDLQF 779
D+ ++Y GNL WD+ S L+ F + V+ A+VV +R++GRSRGFGFV + ++
Sbjct: 204 DAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNV 263
Query: 780 ALRAMNGVEVEGRELRLNLASER 848
A+ A++G +EGR +++N+A ER
Sbjct: 264 AIAALDGQNLEGRAIKVNVAEER 286
Score = 74 bits (181), Expect = 1e-013
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = +3
Query: 300 RLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAEEAIQM 479
R+YVGNLP+ + S L +LF + G VVD ++V D+ T RSRGFGFV M + E AI
Sbjct: 208 RIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAA 267
Query: 480 FNTSQIGGRTVKVNFPE 530
+ + GR +KVN E
Sbjct: 268 LDGQNLEGRAIKVNVAE 284
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 89 bits (219), Expect = 4e-018
Identities = 39/82 (47%), Positives = 61/82 (74%)
Frame = +3
Query: 594 YVDSPHKLYAGNLGWDLTSQGLKDAFGDQPGVLGAKVVYERDSGRSRGFGFVSFESAQDL 773
Y ++ HKL+ GNL W +TS+ L AF + V+GA+VV++ D+GRSRG+GFV + S ++
Sbjct: 172 YPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEM 231
Query: 774 QFALRAMNGVEVEGRELRLNLA 839
+ AL +++G E+EGR +R+NLA
Sbjct: 232 ETALESLDGFELEGRAIRVNLA 253
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 87 bits (213), Expect = 2e-017
Identities = 38/89 (42%), Positives = 64/89 (71%)
Frame = +3
Query: 582 GNRSYVDSPHKLYAGNLGWDLTSQGLKDAFGDQPGVLGAKVVYERDSGRSRGFGFVSFES 761
G+ S S ++LY GNL W + L++ F +Q V+ A+V+Y+RDSGRS+GFGFV+ S
Sbjct: 248 GSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSS 307
Query: 762 AQDLQFALRAMNGVEVEGRELRLNLASER 848
+Q++Q A+ ++NG +++GR++R++ A R
Sbjct: 308 SQEVQKAINSLNGADLDGRQIRVSEAEAR 336
Score = 85 bits (209), Expect = 6e-017
Identities = 42/91 (46%), Positives = 57/91 (62%)
Frame = +3
Query: 300 RLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAEEAIQM 479
+L+VGNL + + S++L+QLF AG V V+++YDKVT RSRGFGFVTM + E E A Q
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 480 FNTSQIGGRTVKVNFPEVPRGGEREVMRAAK 572
FN + GR ++VN P E R +
Sbjct: 160 FNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190
Score = 76 bits (186), Expect = 3e-014
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Frame = +3
Query: 285 TGEEGRLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAE 464
+G RLYVGNL + + L LF + G VV+ +++YD+ + RS+GFGFVT+ S +E +
Sbjct: 253 SGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQ 312
Query: 465 EAIQMFNTSQIGGRTVKVNFPEV--PRG 542
+AI N + + GR ++V+ E PRG
Sbjct: 313 KAINSLNGADLDGRQIRVSEAEARPPRG 340
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 87 bits (213), Expect = 2e-017
Identities = 38/89 (42%), Positives = 64/89 (71%)
Frame = +3
Query: 582 GNRSYVDSPHKLYAGNLGWDLTSQGLKDAFGDQPGVLGAKVVYERDSGRSRGFGFVSFES 761
G+ S S ++LY GNL W + L++ F +Q V+ A+V+Y+RDSGRS+GFGFV+ S
Sbjct: 248 GSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSS 307
Query: 762 AQDLQFALRAMNGVEVEGRELRLNLASER 848
+Q++Q A+ ++NG +++GR++R++ A R
Sbjct: 308 SQEVQKAINSLNGADLDGRQIRVSEAEAR 336
Score = 85 bits (209), Expect = 6e-017
Identities = 42/91 (46%), Positives = 57/91 (62%)
Frame = +3
Query: 300 RLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAEEAIQM 479
+L+VGNL + + S++L+QLF AG V V+++YDKVT RSRGFGFVTM + E E A Q
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 480 FNTSQIGGRTVKVNFPEVPRGGEREVMRAAK 572
FN + GR ++VN P E R +
Sbjct: 160 FNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190
Score = 76 bits (186), Expect = 3e-014
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Frame = +3
Query: 285 TGEEGRLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAE 464
+G RLYVGNL + + L LF + G VV+ +++YD+ + RS+GFGFVT+ S +E +
Sbjct: 253 SGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQ 312
Query: 465 EAIQMFNTSQIGGRTVKVNFPEV--PRG 542
+AI N + + GR ++V+ E PRG
Sbjct: 313 KAINSLNGADLDGRQIRVSEAEARPPRG 340
>TAIR9_protein||AT5G06210.1 | Symbols: | RNA-binding protein, putative |
chr5:1878497-1879515 FORWARD
Length = 147
Score = 83 bits (203), Expect = 3e-016
Identities = 38/83 (45%), Positives = 56/83 (67%)
Frame = +3
Query: 276 TQATGEEGRLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIE 455
TQ G +L++G L + T LS+ F + G VV+ QIV D+V+DRS+GFGFVT S +
Sbjct: 27 TQRRGVASKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASAD 86
Query: 456 EAEEAIQMFNTSQIGGRTVKVNF 524
EA++A+ FN Q+ GRT+ V++
Sbjct: 87 EAQKALMEFNGQQLNGRTIFVDY 109
>TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 77 bits (189), Expect = 1e-014
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = +3
Query: 582 GNRSYVDSPHKLYAGNLGWDLTSQGLKDAFGDQPGVLGAKVVYERDSGRSRGFGFVSFES 761
G+ Y+ S KL+ G L W LK AF V A V+ +R++GRSRGFGFVSF
Sbjct: 28 GSLRYMSS--KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSC 85
Query: 762 AQDLQFALRAMNGVEVEGRELRLNLASERATVSR 863
A++ M+G E+ GR++R+NLA+ER++ R
Sbjct: 86 EDSANNAIKEMDGKELNGRQIRVNLATERSSAPR 119
>TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 77 bits (189), Expect = 1e-014
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = +3
Query: 582 GNRSYVDSPHKLYAGNLGWDLTSQGLKDAFGDQPGVLGAKVVYERDSGRSRGFGFVSFES 761
G+ Y+ S KL+ G L W LK AF V A V+ +R++GRSRGFGFVSF
Sbjct: 28 GSLRYMSS--KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSC 85
Query: 762 AQDLQFALRAMNGVEVEGRELRLNLASERATVSR 863
A++ M+G E+ GR++R+NLA+ER++ R
Sbjct: 86 EDSANNAIKEMDGKELNGRQIRVNLATERSSAPR 119
>TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 154
Score = 74 bits (180), Expect = 1e-013
Identities = 38/98 (38%), Positives = 55/98 (56%)
Frame = +3
Query: 612 KLYAGNLGWDLTSQGLKDAFGDQPGVLGAKVVYERDSGRSRGFGFVSFESAQDLQFALRA 791
KL+ G L W L+DAF V+ AKV+ +R++GRSRGFGFV+F A+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 792 MNGVEVEGRELRLNLASERATVSRPFVTEEGSSLESSG 905
M+G E+ GR +R+N A++R + R + G S G
Sbjct: 96 MDGKELNGRHIRVNPANDRPSAPRAYGGGGGYSYGGGG 133
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 73 bits (178), Expect = 3e-013
Identities = 35/86 (40%), Positives = 52/86 (60%)
Frame = +3
Query: 612 KLYAGNLGWDLTSQGLKDAFGDQPGVLGAKVVYERDSGRSRGFGFVSFESAQDLQFALRA 791
KL+ G L W L+DAF V+ AKV+ +R++GRSRGFGFV+F A+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 792 MNGVEVEGRELRLNLASERATVSRPF 869
M+G E+ GR +R+N A++R + R +
Sbjct: 96 MDGKELNGRHIRVNPANDRPSAPRAY 121
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,816,456,783
Number of Sequences: 33410
Number of Extensions: 22816456783
Number of Successful Extensions: 723340916
Number of sequences better than 0.0: 0
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