BLASTX 7.6.2
Query= UN47653 /QuerySize=1067
(1066 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G22920.1 | Symbols: ATNYE1, NYE1 | NYE1 (NON-Y... 467 6e-132
TAIR9_protein||AT4G11911.1 | Symbols: | FUNCTIONS IN: molecular... 368 4e-102
TAIR9_protein||AT4G11910.1 | Symbols: | INVOLVED IN: biological... 366 1e-101
TAIR9_protein||AT1G44000.1 | Symbols: | unknown protein | chr1:... 173 2e-043
>TAIR9_protein||AT4G22920.1 | Symbols: ATNYE1, NYE1 | NYE1 (NON-YELLOWING 1) |
chr4:12016776-12017969 REVERSE
Length = 269
Score = 467 bits (1201), Expect = 6e-132
Identities = 220/269 (81%), Positives = 240/269 (89%)
Frame = +2
Query: 89 MCSLSANMLLPTKLKPAYSDKQSYCTTNSLLVSNTRPKRKKNQSTVPMARLFGPAIFESS 268
MCSLSA MLLPTKLKPAYSDK+S +++S L N R +KKNQS VP+ARLFGPAIFESS
Sbjct: 1 MCSLSAIMLLPTKLKPAYSDKRSNSSSSSSLFFNNRRSKKKNQSIVPVARLFGPAIFESS 60
Query: 269 KLKVLFLGVDDKKHPPTLPRTYTLTHSDITAKLTLAISHSINNSQLQGWANRIYRDEVVA 448
KLKVLFLGVD+KKHP TLPRTYTLTHSDITAKLTLAIS SINNSQLQGWANR+YRDEVVA
Sbjct: 61 KLKVLFLGVDEKKHPSTLPRTYTLTHSDITAKLTLAISQSINNSQLQGWANRLYRDEVVA 120
Query: 449 EWKKVKGNMSLHVHCHISGAHFLLDLFPKFRYYIFSKELPVVLNAIVHGDGNLLNSYPEL 628
EWKKVKG MSLHVHCHISG HFLLDLF KFRY+IF KELPVVL A VHGDGNLLN+YPEL
Sbjct: 121 EWKKVKGKMSLHVHCHISGGHFLLDLFAKFRYFIFCKELPVVLKAFVHGDGNLLNNYPEL 180
Query: 629 QEALVWVYFHSNVDEFNRVECWGPLWEATSHDGHRTQTLPETLCKEECGCCFPTVSSIPW 808
QEALVWVYFHSNV+EFN+VECWGPLWEA S DGH+T+TLPE C +EC CCFPTVSSIPW
Sbjct: 181 QEALVWVYFHSNVNEFNKVECWGPLWEAVSPDGHKTETLPEARCADECSCCFPTVSSIPW 240
Query: 809 SHSLTNEGVTDYPGTQAEGMSTPSPEKI* 895
SHSL+NEGV Y GTQ EG++TP+PEK+*
Sbjct: 241 SHSLSNEGVNGYSGTQTEGIATPNPEKL* 269
>TAIR9_protein||AT4G11911.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; BEST Arabidopsis thaliana protein match is: NYE1
(NON-YELLOWING 1) (TAIR:AT4G22920.1); Has 130 Blast hits to 128
proteins in 45 species: Archae - 0; Bacteria - 50; Metazoa - 0; Fungi -
0; Plants - 78; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr4:7158150-7159440 FORWARD
Length = 274
Score = 368 bits (944), Expect = 4e-102
Identities = 176/246 (71%), Positives = 201/246 (81%), Gaps = 7/246 (2%)
Frame = +2
Query: 89 MCSLSANMLLPTKLKPAYSDKQSYCTTNSLLVSNTRPKRKKNQSTVPMARLFGPAIFESS 268
MCSL A++LLP LKP +SDK+ +S + S TR ++K QS P+ARLFG AIFE+S
Sbjct: 1 MCSLMASLLLPANLKPDFSDKE----RSSSIPSTTRSSKRKKQSMFPVARLFGQAIFEAS 56
Query: 269 KLKVLFLGVDDKKHPPTLPRTYTLTHSDITAKLTLAISHSINNSQLQGWANRIYRDEVVA 448
KL V FLGVD+KKHPP LPRTYT THSDITAKLTLAISHSINNSQLQGWANR+YRDEVVA
Sbjct: 57 KLNVKFLGVDEKKHPPNLPRTYTFTHSDITAKLTLAISHSINNSQLQGWANRLYRDEVVA 116
Query: 449 EWKKVKGNMSLHVHCHISGAHFLLDLFPKFRYYIFSKELPVVLNAIVHGDGNLLNSYPEL 628
EW+KVK NMSLHVHCHISG HFLLDL + RY+IF KELP+VL A VHGD N+LN+YPEL
Sbjct: 117 EWRKVKSNMSLHVHCHISGDHFLLDLIAELRYFIFCKELPMVLKAFVHGDENMLNNYPEL 176
Query: 629 QEALVWVYFHSNVDEFNRVECWGPLWEATSHDGHRTQT---LPETLCKEECGCCFPTVSS 799
EA VWVYFHSN+ +FN+VECWG L EATSHDG +T T LPE C ++C CCFPTVS+
Sbjct: 177 HEAFVWVYFHSNIPKFNKVECWGRLCEATSHDGCKTPTCEILPEPPCFDKCSCCFPTVST 236
Query: 800 IPWSHS 817
IPWSHS
Sbjct: 237 IPWSHS 242
>TAIR9_protein||AT4G11910.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein
match is: NYE1 (NON-YELLOWING 1) (TAIR:AT4G22920.1); Has 130 Blast hits
to 128 proteins in 45 species: Archae - 0; Bacteria - 50; Metazoa - 0;
Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink). | chr4:7156435-7157839 FORWARD
Length = 272
Score = 366 bits (939), Expect = 1e-101
Identities = 177/248 (71%), Positives = 205/248 (82%), Gaps = 10/248 (4%)
Frame = +2
Query: 89 MCSLSANMLLPTKLKPAYSDKQSYCTTNSLLVSNTRPKRKKNQSTVPMARLFGPAIFESS 268
MCSL+ N+LLP+K+KP + +K S T+SL V+ TR + KN+S VP+ARLFGPAIFE+S
Sbjct: 1 MCSLATNLLLPSKMKPVFPEKLS---TSSLCVT-TRRSKMKNRSIVPVARLFGPAIFEAS 56
Query: 269 KLKVLFLGVDDKKHPPTLPRTYTLTHSDITAKLTLAISHSINNSQLQGWANRIYRDEVVA 448
KLKVLFLGVD+KKHP LPRTYTLTHSDITAKLTLAIS SINNSQLQGWAN+++RDEVV
Sbjct: 57 KLKVLFLGVDEKKHPAKLPRTYTLTHSDITAKLTLAISQSINNSQLQGWANKLFRDEVVG 116
Query: 449 EWKKVKGNMSLHVHCHISGAHFLLDLFPKFRYYIFSKELPVVLNAIVHGDGNLLNSYPEL 628
EWKKVKG MSLHVHCHISG HF L+L K RYYIF KELPVVL A HGD LLN++PEL
Sbjct: 117 EWKKVKGKMSLHVHCHISGGHFFLNLIAKLRYYIFCKELPVVLEAFAHGDEYLLNNHPEL 176
Query: 629 QEALVWVYFHSNVDEFNRVECWGPLWEATS---HDGH---RTQTLPETLCKEECGCCFPT 790
QE+ VWVYFHSN+ E+N+VECWGPLWEA S HDG +++TLPE C +EC CCFPT
Sbjct: 177 QESPVWVYFHSNIPEYNKVECWGPLWEAMSQHQHDGRTHKKSETLPELPCPDECKCCFPT 236
Query: 791 VSSIPWSH 814
VS+IPWSH
Sbjct: 237 VSTIPWSH 244
>TAIR9_protein||AT1G44000.1 | Symbols: | unknown protein |
chr1:16708201-16709521 REVERSE
Length = 261
Score = 173 bits (437), Expect = 2e-043
Identities = 92/188 (48%), Positives = 122/188 (64%), Gaps = 13/188 (6%)
Frame = +2
Query: 236 RLFGP-AIFESSKLKVLFLG--VDDKKHPPTL-PRTYTLTHSDITAKLTLAISHSINNSQ 403
RL P A F+SSKLKV FLG +++K + + PRTY L+H D TA LTL IS+ IN Q
Sbjct: 65 RLLVPQANFDSSKLKVEFLGELLENKSNGGIITPRTYILSHCDFTANLTLTISNVINLDQ 124
Query: 404 LQGWANRIYRDEVVAEWKKVKGNMSLHVHCHISGAHFLLDLFPKFRYYIFSKELPVVLNA 583
L+GW +D+VVAEWKKV + LH+HC +SG L D+ + RY+IFSKELP+VL A
Sbjct: 125 LEGWYK---KDDVVAEWKKVNDELRLHIHCCVSGMSLLQDVAAELRYHIFSKELPLVLKA 181
Query: 584 IVHGDGNLLNSYPELQEALVWVYFHSNVDEFNRVECWGPLWEAT------SHDGHRTQTL 745
+VHGD + PEL +A VWVYFHS+ ++NR+ECWGPL +A +H G + T
Sbjct: 182 VVHGDSVMFRENPELMDAYVWVYFHSSTPKYNRIECWGPLKDAAKGKQQGNHQGFLSSTT 241
Query: 746 PETLCKEE 769
L + +
Sbjct: 242 SRKLIRHK 249
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,816,456,783
Number of Sequences: 33410
Number of Extensions: 22816456783
Number of Successful Extensions: 723340916
Number of sequences better than 0.0: 0
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